349
Proline, 256
Prorocentrum minimum, 284
Proteomics, 224, 231
Proteomics and metabolomics, 214, 215
PSAL. See PSI subunit L (PSAL)
PSI subunit L (PSAL), 135
Pulse amplitude modulation (PAM)
fluorometry, 138
Pyropia, 6, 8, 15, 17–21, 26, 27
Pyropia haitanensis, 60
Pyropia leucosticta, 19
Pyropia yezoensis, 19
Q
QS N-acyl-homoserine lactone (AHL)
molecules, 286
Quantitative real-time PCR (qRT-PCR), 330
Quorum sensing
AHL- and DNA-binding domains, 304
bidirectional interkingdom signalling, 304
carpospores, 306
gram-negative bacteria, 304
green algae, 306
LuxR regulate virulence, 304–305
N-acyl side-chains, 305
plant-associated bacteria, 304
zoospore, 305
Quorum sensing (QS) systems, 302
R
Reactive oxygen species
oxidative stress, 254–257
Reactive oxygen species (ROS), 38, 125
Relative electron transport rate (RETR), 126
Ribosomal RNA (rRNA), 224
Ribotyping, 333, 334
Ribulose-1,5-bisphosphate carboxylase
oxygenase (Rubisco), 136
RNA sequencing, 213, 214
Rubisco. See Ribulose-1,5-bisphosphate
carboxylase oxygenase (Rubisco)
S
Saccharina japonica, 5
Saccharolipids, 54, 55, 81
S-adenosylmethionine (SAM), 104
Salinity, 127, 128
Salinity stress, 144–145
CO 2 enrichment, 143, 144
cytochrome b559 alpha subunit, 142
heat stress, 142, 143
NPQ, 141
osmoregulatory processes, 141
oxygen evolution rates, 141
photosynthetic responses, 141
phytotoxins (see Phytotoxins)
San Pedro Ocean Time-series (SPOT), 226
Sargassum, 6
Scenedesmus acutus, 105
Scenedesmus incrassulatus, 105
Scenedesmus vacuolatus, 267
Seagrasses
aquatic autotrophic organisms, 190
carbon traps, 120
coastal and estuarine sediments, 190
flowering monocotyledonous plants, 120
organic carbon, 120
systems biology, 120
Seaweed, 4–9
distribution in the intertidal zone, 18–19
tolerance pathways to desiccation stress,
14–28
Seaweed genetic resource, 8, 9
Seaweed lipidomics, 60–81, 84–86
allied omics platforms, 86–90
application to seaweed systems biology, 81
acclimation strategies to abiotic/biotic
stress, 84–86
elucidation of lipidomic profiling, 81, 84
identification of novel lipids, 81, 84
tools and techniques, 61
analytical platforms for lipidomics,
63–69
lipidomic data analysis, 69–81
sampling and lipid extraction, 61, 62
Seaweed lipids, 52
Seaweeds, 4
ABC transporter proteins, 40
Buffering Capacities, 17, 18
CO 2 -driven pH, 42
coastal benthic ecosystems, 37
community structure, 44
geographic distribution across intertidal
shores, 19, 20
heavy metal stress, 39
heavy metal toxicity, 42–44
human consumption, 43
inorganic carbon concentration, 43
marine organisms, 38
molecular mechanisms of desiccation
tolerance, 21–28
Scytosiphon spp, 38
Secondary metabolites, 190, 193, 199
Siderophore, 283, 324, 327
Silver thiosulphate (STS), 106
Index
Proline, 256
Prorocentrum minimum, 284
Proteomics, 224, 231
Proteomics and metabolomics, 214, 215
PSAL. See PSI subunit L (PSAL)
PSI subunit L (PSAL), 135
Pulse amplitude modulation (PAM)
fluorometry, 138
Pyropia, 6, 8, 15, 17–21, 26, 27
Pyropia haitanensis, 60
Pyropia leucosticta, 19
Pyropia yezoensis, 19
Q
QS N-acyl-homoserine lactone (AHL)
molecules, 286
Quantitative real-time PCR (qRT-PCR), 330
Quorum sensing
AHL- and DNA-binding domains, 304
bidirectional interkingdom signalling, 304
carpospores, 306
gram-negative bacteria, 304
green algae, 306
LuxR regulate virulence, 304–305
N-acyl side-chains, 305
plant-associated bacteria, 304
zoospore, 305
Quorum sensing (QS) systems, 302
R
Reactive oxygen species
oxidative stress, 254–257
Reactive oxygen species (ROS), 38, 125
Relative electron transport rate (RETR), 126
Ribosomal RNA (rRNA), 224
Ribotyping, 333, 334
Ribulose-1,5-bisphosphate carboxylase
oxygenase (Rubisco), 136
RNA sequencing, 213, 214
Rubisco. See Ribulose-1,5-bisphosphate
carboxylase oxygenase (Rubisco)
S
Saccharina japonica, 5
Saccharolipids, 54, 55, 81
S-adenosylmethionine (SAM), 104
Salinity, 127, 128
Salinity stress, 144–145
CO 2 enrichment, 143, 144
cytochrome b559 alpha subunit, 142
heat stress, 142, 143
NPQ, 141
osmoregulatory processes, 141
oxygen evolution rates, 141
photosynthetic responses, 141
phytotoxins (see Phytotoxins)
San Pedro Ocean Time-series (SPOT), 226
Sargassum, 6
Scenedesmus acutus, 105
Scenedesmus incrassulatus, 105
Scenedesmus vacuolatus, 267
Seagrasses
aquatic autotrophic organisms, 190
carbon traps, 120
coastal and estuarine sediments, 190
flowering monocotyledonous plants, 120
organic carbon, 120
systems biology, 120
Seaweed, 4–9
distribution in the intertidal zone, 18–19
tolerance pathways to desiccation stress,
14–28
Seaweed genetic resource, 8, 9
Seaweed lipidomics, 60–81, 84–86
allied omics platforms, 86–90
application to seaweed systems biology, 81
acclimation strategies to abiotic/biotic
stress, 84–86
elucidation of lipidomic profiling, 81, 84
identification of novel lipids, 81, 84
tools and techniques, 61
analytical platforms for lipidomics,
63–69
lipidomic data analysis, 69–81
sampling and lipid extraction, 61, 62
Seaweed lipids, 52
Seaweeds, 4
ABC transporter proteins, 40
Buffering Capacities, 17, 18
CO 2 -driven pH, 42
coastal benthic ecosystems, 37
community structure, 44
geographic distribution across intertidal
shores, 19, 20
heavy metal stress, 39
heavy metal toxicity, 42–44
human consumption, 43
inorganic carbon concentration, 43
marine organisms, 38
molecular mechanisms of desiccation
tolerance, 21–28
Scytosiphon spp, 38
Secondary metabolites, 190, 193, 199
Siderophore, 283, 324, 327
Silver thiosulphate (STS), 106
Index