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Fig. 3.3. Streptokinase (0.5 ltg, 10
pmol) was separated on a 12 %
SDS-polyacrylamide gel, detected by Reverse-staining
and digested with trypsin in 50 mM ammonium bicarbonate during 4 h. The peptides were extracted by incubating under
vortexing for 10
mins the gel microparticles successively once in water, twice in 50 %
acetonitrile, 0.1 %
TFA and for 1
min
once in 80 %
ACN. These eluates were concentrated together up to about 50 It!. The gel pellet was then re-extracted with
100
Itl offormic acid: isopropanol: acetonitrile: water (20:15:25:40)
and the eluate concentrated to about 50
It!. These eluates (0.5
It!) were analyzed on DHB matrix in a PerSeptive Voyager Elite mass spectrometer equipped with a reflectron and
delayed extraction. Ion acceleration voltage was 20
kV and 200-256
scans were averaged. The peptide masses were matched with the cloned sequence using the program GPMA W (Lighthouse Data, Denmark). A: Analysis of pep tides eluted in
aqueous acetonitrile.
B: Analysis of pep tides eluted in formic acid: isopropanol: acetonitrile: water
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