296 Marine Macro- and Microalgae: An Overview
Mussgnug, J.H., S. Thomas-Hall, J. Rupprecht, A. Foo, V. Klassen, A. McDowall, P.M. Schenk, O. Kruse and B. Hankamer.
2007. Engineering photosynthetic light capture: impacts on improved solar energy to biomass conversion. Plant
Biotechnol. J. 5: 802–814.
Muto, M., Y. Fukuda, M. Nemoto, T. Yoshino, T. Matsunaga and T. Tanaka. 2013. Establishment of a genetic transformation
system for the marine pennate diatom Fistulifera sp. strain JPCC DA0580 a high triglyceride producer. Mar Biotechnol.
(NY) 15: 48–55.
Nagarajan, D., D.J. Lee, A. Kondo and J.S. Chang. 2017. Recent insights into biohydrogen production by microalgae - From
biophotolysis to dark fermentation. Bioresour. Technol. 227: 373–387.
Nagy, L.E., J.E. Meuser, S. Plummer, M. Seibert, M.L. Ghirardi, P.W. King, D. Ahmann and M.C. Posewitz. 2007. Application
of gene-shuffling for the rapid generation of novel [FeFe]-hydrogenase libraries. Biotechnol. Lett. 29: 421–430.
Ng, I.S., S.I. Tan, P.H. Kao, Y.K. Chang and J.S. Chang. 2017. Recent developments on genetic engineering of microalgae
for biofuels and bio-based chemicals. Biotechnol. J. 12: 1600644. doi:10.1002/biot.201600644.
Nguyen, A.V., J. Toepel, S. Burgess, A. Uhmeyer, O. Blifernez, A. Doebbe, B. Hankamer, P. Nixon, L. Wobbe and O. Kruse.
2011. Time-course global expression profiles of Chlamydomonas reinhardtii during photo-biological H 2 production.
PLoS One 6: e29364.
Niu, Y-F., Z-K. Yang, M-H. Zhang, C-C. Zhu, W-D. Yang, J-S. Liu and H-Y. Li. 2012. Transformation of diatom Phaeodactylum
tricornutum by electroporation and establishment of inducible selection marker. Biotechniques. 52: 1–3. doi:
10.2144/000113881.
Noth, J., D. Krawietz, A. Hemschemeier and T. Happe. 2013. Pyruvate:ferredoxin oxidoreductase is coupled to light-independent
hydrogen production in Chlamydomonas reinhardtii. J. Biol. Chem. 288: 4368–4377.
Nymark, M., A.K. Sharma, T. Sparstad, A.M. Bones and P. Winge. 2016. A CRISPR/Cas9 system adapted for gene editing in
marine algae. Sci. Rep. 6: 24951. doi: 10.1038/srep24951
Oey, M., A.L. Sawyer, I.L. Ross and B. Hankamer B1. 2016. Challenges and opportunities for hydrogen production from
microalgae. Plant Biotechnol. J. 14: 1487–1499.
Ogawa, T., M. Tamoi, A. Kimura, A. Mine, H. Sakuyama, E. Yoshida, T. Maruta, K. Suzuki, T. Ishikawa and S. Shigeoka.
2015. Enhancement of photosynthetic capacity in Euglena gracilis by expression of cyanobacterial fructose-1,6-/
sedoheptulose-1,7-bisphosphatase leads to increases in biomass and wax ester production. Biotechnol. Biofuels. 8: 80,
doi: 10.1186/s13068-015-0264-5.
Orr, D., A. Alcantara, M.V. Kapralov, P.J. Andralojc, E. Carmo-Silva and M.A.J. Parry. 2016. Surveying Rubisco diversity
and temperatura response to improve crop photosynthetic efficiency. Plant Physiol. 172: 707–717.
Parker, M.S., T. Mock and E.V. Armbrust. 2008. Genomic insights into marine microalgae. Annu. Rev. Genet. 42: 619–645.
Parikh, M.R., D.N. Greene, K.K. Woods and I. Matsumura. 2006. Directed evolution of Rubisco hypermorphs through genetic
selection in engineered E. coli. Protein Eng. Des. Sel. 19: 113–119.
Peterhansel, C. and V.G. Maurino. 2011. Photorespiration redesigned. Plant Physiol. 155: 49–55.
Philipps, G., D. Krawietz, A. Hemschemeier and T. Happe. 2011. A pyruvate formate lyase-deficient Chlamydomonas reinhardtii
strain provides evidence for a link between fermentation and hydrogen production in green algae. Plant J. 66: 330–340.
Pinto, T.S., F.X. Malcata, J.D. Arrabaça, J.M. Silva, R.J. Spreitzer and M.G. Esquível. 2013. Rubisco mutants of Chlamydomonas
reinhardtii enhance photosynthetic hydrogen production. Appl. Microbiol. Biotechnol. 97: 5635–5643.
Polle, J.E.W., S.D. Kanakagiri and A. Melis. 2003. tla1, a DNA insertional transformant of the green alga Chlamydomonas
reinhardtii with a truncated light-harvesting chlorophyll antenna size. Planta 217: 49–59.
Posewitz, M.C., A. Dubini, J.E. Meuser, M. Seibert and M.L. Ghirardi. 2008. Hydrogenases hydrogen production and anoxia.
pp. 217–255. In: D. Stern (ed.). The Chlamydomonas Sourcebook, vol. 2. Academic Press. Oxford.
Poulsen, N., P.M. Chesley and N. Kröger. 2006. Molecular genetic manipulation of the diatom Thalassiosira pseudonana
(Bacillariophyceae). J. Phycol. 42: 1059–1065.
Poulsen, N. and N. Kröger. 2005. A new molecular tool for transgenic diatoms. FEBS J. 272: 3413–3423.
Qin, S., G.Q. Sun, P. Jiang, L.H. Zou, Y. Wu and C.K. Tseng. 1999. Review of genetic engineering of Laminaria japonica
(Laminariales, Phaeophyta) in China. Hydrobiologia 398: 469–472.
Qin, S., D.Z. Yu, P. Jiang, C.Y. Teng and C.K. Zeng. 2003. Stable expression of lacZ reporter gene in seaweed Undaria
pinnatifida. High Technol. Lett. 13: 87–89.
Qin, S., H. Lin and P. Jiang. 2012. Advances in genetic engineering of marine algae. Biotechnol. Adv. 30: 1602–1613.
Radakovits, R., R.E. Jinkerson, A.l. Darzins and M.C. Posewitz. 2010a. Genetic engineering of algae for enhanced biofuel
production. Eukaryotic Cell 9: 486–501.
Radakovits, R., P.M. Eduafo and M.C. Posewitz. 2010b. Genetic engineering of fatty acid chain length in Phaeodactylum
tricornutum. Metabolic Engineer. 13: 89–95.
Radakovits, R., R.E. Jinkerson, S.I. Fuerstenberg, H. Tae, R.E. Settlage, J.L. Boore and M.C. Posewitz. 2012. Draft genome
sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana. Nat. Commun. 3: 686. doi:
10.1038/ncomms1688.
Rae, B.D., B.M. Long, M.R. Badger and G.D. Price. 2013. Functions, compositions, and evolution of the two types of
carboxysomes: polyhedral microcompartments that facilitate CO 2 fixation in cyanobacteria and some proteobacteria.
Microbiol. Mol. Biol. Rev. 77: 357–379.
Raines, C.A. 2003. The Calvin cycle revisited. Photosynth. Res. 75: 1–10.
Mussgnug, J.H., S. Thomas-Hall, J. Rupprecht, A. Foo, V. Klassen, A. McDowall, P.M. Schenk, O. Kruse and B. Hankamer.
2007. Engineering photosynthetic light capture: impacts on improved solar energy to biomass conversion. Plant
Biotechnol. J. 5: 802–814.
Muto, M., Y. Fukuda, M. Nemoto, T. Yoshino, T. Matsunaga and T. Tanaka. 2013. Establishment of a genetic transformation
system for the marine pennate diatom Fistulifera sp. strain JPCC DA0580 a high triglyceride producer. Mar Biotechnol.
(NY) 15: 48–55.
Nagarajan, D., D.J. Lee, A. Kondo and J.S. Chang. 2017. Recent insights into biohydrogen production by microalgae - From
biophotolysis to dark fermentation. Bioresour. Technol. 227: 373–387.
Nagy, L.E., J.E. Meuser, S. Plummer, M. Seibert, M.L. Ghirardi, P.W. King, D. Ahmann and M.C. Posewitz. 2007. Application
of gene-shuffling for the rapid generation of novel [FeFe]-hydrogenase libraries. Biotechnol. Lett. 29: 421–430.
Ng, I.S., S.I. Tan, P.H. Kao, Y.K. Chang and J.S. Chang. 2017. Recent developments on genetic engineering of microalgae
for biofuels and bio-based chemicals. Biotechnol. J. 12: 1600644. doi:10.1002/biot.201600644.
Nguyen, A.V., J. Toepel, S. Burgess, A. Uhmeyer, O. Blifernez, A. Doebbe, B. Hankamer, P. Nixon, L. Wobbe and O. Kruse.
2011. Time-course global expression profiles of Chlamydomonas reinhardtii during photo-biological H 2 production.
PLoS One 6: e29364.
Niu, Y-F., Z-K. Yang, M-H. Zhang, C-C. Zhu, W-D. Yang, J-S. Liu and H-Y. Li. 2012. Transformation of diatom Phaeodactylum
tricornutum by electroporation and establishment of inducible selection marker. Biotechniques. 52: 1–3. doi:
10.2144/000113881.
Noth, J., D. Krawietz, A. Hemschemeier and T. Happe. 2013. Pyruvate:ferredoxin oxidoreductase is coupled to light-independent
hydrogen production in Chlamydomonas reinhardtii. J. Biol. Chem. 288: 4368–4377.
Nymark, M., A.K. Sharma, T. Sparstad, A.M. Bones and P. Winge. 2016. A CRISPR/Cas9 system adapted for gene editing in
marine algae. Sci. Rep. 6: 24951. doi: 10.1038/srep24951
Oey, M., A.L. Sawyer, I.L. Ross and B. Hankamer B1. 2016. Challenges and opportunities for hydrogen production from
microalgae. Plant Biotechnol. J. 14: 1487–1499.
Ogawa, T., M. Tamoi, A. Kimura, A. Mine, H. Sakuyama, E. Yoshida, T. Maruta, K. Suzuki, T. Ishikawa and S. Shigeoka.
2015. Enhancement of photosynthetic capacity in Euglena gracilis by expression of cyanobacterial fructose-1,6-/
sedoheptulose-1,7-bisphosphatase leads to increases in biomass and wax ester production. Biotechnol. Biofuels. 8: 80,
doi: 10.1186/s13068-015-0264-5.
Orr, D., A. Alcantara, M.V. Kapralov, P.J. Andralojc, E. Carmo-Silva and M.A.J. Parry. 2016. Surveying Rubisco diversity
and temperatura response to improve crop photosynthetic efficiency. Plant Physiol. 172: 707–717.
Parker, M.S., T. Mock and E.V. Armbrust. 2008. Genomic insights into marine microalgae. Annu. Rev. Genet. 42: 619–645.
Parikh, M.R., D.N. Greene, K.K. Woods and I. Matsumura. 2006. Directed evolution of Rubisco hypermorphs through genetic
selection in engineered E. coli. Protein Eng. Des. Sel. 19: 113–119.
Peterhansel, C. and V.G. Maurino. 2011. Photorespiration redesigned. Plant Physiol. 155: 49–55.
Philipps, G., D. Krawietz, A. Hemschemeier and T. Happe. 2011. A pyruvate formate lyase-deficient Chlamydomonas reinhardtii
strain provides evidence for a link between fermentation and hydrogen production in green algae. Plant J. 66: 330–340.
Pinto, T.S., F.X. Malcata, J.D. Arrabaça, J.M. Silva, R.J. Spreitzer and M.G. Esquível. 2013. Rubisco mutants of Chlamydomonas
reinhardtii enhance photosynthetic hydrogen production. Appl. Microbiol. Biotechnol. 97: 5635–5643.
Polle, J.E.W., S.D. Kanakagiri and A. Melis. 2003. tla1, a DNA insertional transformant of the green alga Chlamydomonas
reinhardtii with a truncated light-harvesting chlorophyll antenna size. Planta 217: 49–59.
Posewitz, M.C., A. Dubini, J.E. Meuser, M. Seibert and M.L. Ghirardi. 2008. Hydrogenases hydrogen production and anoxia.
pp. 217–255. In: D. Stern (ed.). The Chlamydomonas Sourcebook, vol. 2. Academic Press. Oxford.
Poulsen, N., P.M. Chesley and N. Kröger. 2006. Molecular genetic manipulation of the diatom Thalassiosira pseudonana
(Bacillariophyceae). J. Phycol. 42: 1059–1065.
Poulsen, N. and N. Kröger. 2005. A new molecular tool for transgenic diatoms. FEBS J. 272: 3413–3423.
Qin, S., G.Q. Sun, P. Jiang, L.H. Zou, Y. Wu and C.K. Tseng. 1999. Review of genetic engineering of Laminaria japonica
(Laminariales, Phaeophyta) in China. Hydrobiologia 398: 469–472.
Qin, S., D.Z. Yu, P. Jiang, C.Y. Teng and C.K. Zeng. 2003. Stable expression of lacZ reporter gene in seaweed Undaria
pinnatifida. High Technol. Lett. 13: 87–89.
Qin, S., H. Lin and P. Jiang. 2012. Advances in genetic engineering of marine algae. Biotechnol. Adv. 30: 1602–1613.
Radakovits, R., R.E. Jinkerson, A.l. Darzins and M.C. Posewitz. 2010a. Genetic engineering of algae for enhanced biofuel
production. Eukaryotic Cell 9: 486–501.
Radakovits, R., P.M. Eduafo and M.C. Posewitz. 2010b. Genetic engineering of fatty acid chain length in Phaeodactylum
tricornutum. Metabolic Engineer. 13: 89–95.
Radakovits, R., R.E. Jinkerson, S.I. Fuerstenberg, H. Tae, R.E. Settlage, J.L. Boore and M.C. Posewitz. 2012. Draft genome
sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana. Nat. Commun. 3: 686. doi:
10.1038/ncomms1688.
Rae, B.D., B.M. Long, M.R. Badger and G.D. Price. 2013. Functions, compositions, and evolution of the two types of
carboxysomes: polyhedral microcompartments that facilitate CO 2 fixation in cyanobacteria and some proteobacteria.
Microbiol. Mol. Biol. Rev. 77: 357–379.
Raines, C.A. 2003. The Calvin cycle revisited. Photosynth. Res. 75: 1–10.