Devers EA, Branscheid A, May P, Krajinski F (2011)
Stars and symbiosis: microRNA- and microRNA*mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis. Plant Physiol 156:1990–
2010
Devers E, Teply J, Reinert A, Gaude N, Krajinski F
(2013) An endogenous artificial microRNA system
for unraveling the function of root endosymbioses
related genes in Medicago truncatula. BMC Plant
Biol 13:82
Die ´dhiou I, Diouf D (2018) Transcription factors network in root endosymbiosis establishment and
development. World J Microbiol Biotechnol 34
(3):37
Do ¨rmann P, Kim H, Ott T, Schulze-Lefert P, Trujillo M,
Wewer V, Hu ¨ckelhoven R (2014) Cell-autonomous
defense, reorganization and trafficking of membranes in plant-microbe interactions. New Phytol
204(4):815–822
Douds DD, Pfeffer PE, Shachar-Hill Y (2000) Carbon
partitioning, cost and metabolism of arbuscular
mycorrhizae in arbuscular mycorrhizas: physiology and function. In: Kapulnick Y, Douds DD Jr
(eds) Arbuscular mycorrhizas: molecular biology
and physiology. Kluwer Academic, Dordrecht
Fassi B, Fontana A, Trappe JM (1969) Ectomycorrhizae
formed by Endogone lactiflua with species of Pinus
and Pseudotsuga. Mycologia 61:412–414
Favre P, Bapaume L, Bossolini E, Delorenzi M, Falquet
L, Reinhardt D (2014) A novel bioinformatics
pipeline to discover genes related to arbuscular
mycorrhizal symbiosis based on their evolutionary
conservation pattern among higher plants. BMC
Plant Biol 14:333
Feddermann N, Boller T, Salzer P, Elfstrand S, Wiemken A, Elfstrand M (2008) Medicago truncatula
shows distinct patterns of mycorrhiza-related
gene expression after inoculation with three different arbuscular mycorrhizal fungi. Planta 227:671–
680
Feddermann N, Muni RRD, Zeier T, Stuurman J, Ercolin F, Schorderet M, Reinhardt D (2010) The PAM1
gene of petunia, required for intracellular accommodation and morphogenesis of arbuscular
mycorrhizal fungi, encodes a homologue of
VAPYRIN. Plant J 64:470–481
Ferlian O, Eisenhauer N, Aguirrebengoa M, Camara M,
Ramirez-Rojas I, Santos F, Thakur MP (2018)
Invasive earthworms erode soil biodiversity: a
meta-analysis. J Anim Ecol 87:162–172
Fiorilli V, Catoni M, Miozzi L, Novero M, Accotto GP,
Lanfranco L (2009) Global and cell-type gene
expression profiles in tomato plants colonized by
an arbuscular mycorrhizal fungus. New Phytol
184:975–987
Fiorilli V, Vannini C, Ortolani F, Garcia-Seco D, Chiapello M, Novero M, Domingo G, Terzi V, Morcia C,
Bagnaresi P, Moulin L, Bracale M, Bonfante P
(2018) Omics approaches revealed how arbuscular
mycorrhizal symbiosis enhances yield and resistance to leaf pathogen in wheat. Sci Rep 8:9625
Flematti GR, Ghisalberti EL, Dixon KW, Trengove RD
(2004) A compound from smoke that promotes
seed germination. Science 305:977
Floss DS, Levy JG, Le ´vesque-Tremblay V, Pumplin N,
Harrison MJ (2013) DELLA proteins regulate
arbuscule formation in arbuscular mycorrhizal
symbiosis. Proc Natl Acad Sci U S A 110:E5025–
E5034
Floss DS, Le ´vesque-Tremblay V, Park H-J, Harrison MJ
(2016) DELLA proteins regulate expression of a
subset of AM symbiosis- induced genes in Medicago truncatula. Plant Signal Behav 11:e1162369
Floss DS, Gomez SK, Park HJ, McLean AM, Muller LM,
Bhattarai KK, Le ´vesque-Tremblay V, MaldonadoMendoza IE, Harrison MJ (2017) A transcriptional
program for arbuscule degeneration during AM
symbiosis is regulated by MYB1. Curr Biol
27:1206–1212
Foo E, Davies NW (2011) Strigolactones promote nodulation in pea. Planta 234(5):1073–1081
Foo E, Ross JJ, Jones WT, Reid JB (2013) Plant hormones
in arbuscular mycorrhizal symbioses: an emerging
role for gibberellins. Ann Bot 111:769–779
Gallego-Bartolome J, Minguet EG, Grau-Enguix F,
Abbas M, Locascio A, Thomas SG, Alabadi D,
Blazquez MA (2012) Molecular mechanism for
the interaction between gibberellin and brassinosteroid signaling pathways in Arabidopsis. Proc
Natl Acad Sci U S A 109:13446–13451
Gardes M, Bruns TD (1993) ITS primers with enhanced
specificity for basidiomycetes application to the
identification of mycorrhizae and rusts. Mol Ecol
2:113–118
Gaude N, Bortfeld S, Duensing N, Lohse M, Krajinski F
(2012) Arbuscule-containing and non-colonized
cortical cells of mycorrhizal roots undergo extensive and specific reprogramming during arbuscular mycorrhizal development. Plant J 69:510–528
Gehrig H, Schu ¨ßler A, Kluge M (1996) Geosiphon pyriformis, a fungus forming endocytobiosis with
Nostoc (cyanobacteria), is an ancestral member
of the Glomerales: evidence by SSU rRNA analysis.
J Mol Evol 43:71–81
Genre A, Russo G (2016) Does a common pathway
transduce symbiotic signals in plant–microbe
interactions? Front Plant Sci 7:96
Genre A, Chabaud M, Timmers T, Bonfante P, Barker
DG (2005) Arbuscular mycorrhizal fungi elicit a
novel intracellular apparatus in Medicago truncatula root epidermal cells before infection. Plant
Cell 17:3489–3499
Genre A, Chabaud M, Faccio A, Barker DG, Bonfante P
(2008) Prepenetration apparatus assembly precedes and predicts the colonization patterns of
arbuscular mycorrhizal fungi within the root cortex of both Medicago truncatula and Daucus carota. Plant Cell 20:1407–1420
7 Genetics and Genomics Decipher Partner Biology in Arbuscular Mycorrhizas
163
Stars and symbiosis: microRNA- and microRNA*mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis. Plant Physiol 156:1990–
2010
Devers E, Teply J, Reinert A, Gaude N, Krajinski F
(2013) An endogenous artificial microRNA system
for unraveling the function of root endosymbioses
related genes in Medicago truncatula. BMC Plant
Biol 13:82
Die ´dhiou I, Diouf D (2018) Transcription factors network in root endosymbiosis establishment and
development. World J Microbiol Biotechnol 34
(3):37
Do ¨rmann P, Kim H, Ott T, Schulze-Lefert P, Trujillo M,
Wewer V, Hu ¨ckelhoven R (2014) Cell-autonomous
defense, reorganization and trafficking of membranes in plant-microbe interactions. New Phytol
204(4):815–822
Douds DD, Pfeffer PE, Shachar-Hill Y (2000) Carbon
partitioning, cost and metabolism of arbuscular
mycorrhizae in arbuscular mycorrhizas: physiology and function. In: Kapulnick Y, Douds DD Jr
(eds) Arbuscular mycorrhizas: molecular biology
and physiology. Kluwer Academic, Dordrecht
Fassi B, Fontana A, Trappe JM (1969) Ectomycorrhizae
formed by Endogone lactiflua with species of Pinus
and Pseudotsuga. Mycologia 61:412–414
Favre P, Bapaume L, Bossolini E, Delorenzi M, Falquet
L, Reinhardt D (2014) A novel bioinformatics
pipeline to discover genes related to arbuscular
mycorrhizal symbiosis based on their evolutionary
conservation pattern among higher plants. BMC
Plant Biol 14:333
Feddermann N, Boller T, Salzer P, Elfstrand S, Wiemken A, Elfstrand M (2008) Medicago truncatula
shows distinct patterns of mycorrhiza-related
gene expression after inoculation with three different arbuscular mycorrhizal fungi. Planta 227:671–
680
Feddermann N, Muni RRD, Zeier T, Stuurman J, Ercolin F, Schorderet M, Reinhardt D (2010) The PAM1
gene of petunia, required for intracellular accommodation and morphogenesis of arbuscular
mycorrhizal fungi, encodes a homologue of
VAPYRIN. Plant J 64:470–481
Ferlian O, Eisenhauer N, Aguirrebengoa M, Camara M,
Ramirez-Rojas I, Santos F, Thakur MP (2018)
Invasive earthworms erode soil biodiversity: a
meta-analysis. J Anim Ecol 87:162–172
Fiorilli V, Catoni M, Miozzi L, Novero M, Accotto GP,
Lanfranco L (2009) Global and cell-type gene
expression profiles in tomato plants colonized by
an arbuscular mycorrhizal fungus. New Phytol
184:975–987
Fiorilli V, Vannini C, Ortolani F, Garcia-Seco D, Chiapello M, Novero M, Domingo G, Terzi V, Morcia C,
Bagnaresi P, Moulin L, Bracale M, Bonfante P
(2018) Omics approaches revealed how arbuscular
mycorrhizal symbiosis enhances yield and resistance to leaf pathogen in wheat. Sci Rep 8:9625
Flematti GR, Ghisalberti EL, Dixon KW, Trengove RD
(2004) A compound from smoke that promotes
seed germination. Science 305:977
Floss DS, Levy JG, Le ´vesque-Tremblay V, Pumplin N,
Harrison MJ (2013) DELLA proteins regulate
arbuscule formation in arbuscular mycorrhizal
symbiosis. Proc Natl Acad Sci U S A 110:E5025–
E5034
Floss DS, Le ´vesque-Tremblay V, Park H-J, Harrison MJ
(2016) DELLA proteins regulate expression of a
subset of AM symbiosis- induced genes in Medicago truncatula. Plant Signal Behav 11:e1162369
Floss DS, Gomez SK, Park HJ, McLean AM, Muller LM,
Bhattarai KK, Le ´vesque-Tremblay V, MaldonadoMendoza IE, Harrison MJ (2017) A transcriptional
program for arbuscule degeneration during AM
symbiosis is regulated by MYB1. Curr Biol
27:1206–1212
Foo E, Davies NW (2011) Strigolactones promote nodulation in pea. Planta 234(5):1073–1081
Foo E, Ross JJ, Jones WT, Reid JB (2013) Plant hormones
in arbuscular mycorrhizal symbioses: an emerging
role for gibberellins. Ann Bot 111:769–779
Gallego-Bartolome J, Minguet EG, Grau-Enguix F,
Abbas M, Locascio A, Thomas SG, Alabadi D,
Blazquez MA (2012) Molecular mechanism for
the interaction between gibberellin and brassinosteroid signaling pathways in Arabidopsis. Proc
Natl Acad Sci U S A 109:13446–13451
Gardes M, Bruns TD (1993) ITS primers with enhanced
specificity for basidiomycetes application to the
identification of mycorrhizae and rusts. Mol Ecol
2:113–118
Gaude N, Bortfeld S, Duensing N, Lohse M, Krajinski F
(2012) Arbuscule-containing and non-colonized
cortical cells of mycorrhizal roots undergo extensive and specific reprogramming during arbuscular mycorrhizal development. Plant J 69:510–528
Gehrig H, Schu ¨ßler A, Kluge M (1996) Geosiphon pyriformis, a fungus forming endocytobiosis with
Nostoc (cyanobacteria), is an ancestral member
of the Glomerales: evidence by SSU rRNA analysis.
J Mol Evol 43:71–81
Genre A, Russo G (2016) Does a common pathway
transduce symbiotic signals in plant–microbe
interactions? Front Plant Sci 7:96
Genre A, Chabaud M, Timmers T, Bonfante P, Barker
DG (2005) Arbuscular mycorrhizal fungi elicit a
novel intracellular apparatus in Medicago truncatula root epidermal cells before infection. Plant
Cell 17:3489–3499
Genre A, Chabaud M, Faccio A, Barker DG, Bonfante P
(2008) Prepenetration apparatus assembly precedes and predicts the colonization patterns of
arbuscular mycorrhizal fungi within the root cortex of both Medicago truncatula and Daucus carota. Plant Cell 20:1407–1420
7 Genetics and Genomics Decipher Partner Biology in Arbuscular Mycorrhizas
163