Gourdon, P., Andersen, J.L., Langmach, K., Hein, K.L., Bublitz, M., Pedersen, B.P., Liu, X.-Y., Yatime, L., Nyblom,
M., Nielsen, T.T., Olesen, C., Møller, J.V., Nissen, P., Morth, J.P. (2011) HiLiDe–systematic approach to membrane
protein crystallization in lipid and detergent. Cryst. Growth Des. 11:2098–2106.
Grigorieff, N., Ceska, T.A., Downing, K.H., Baldwin, J.M., Henderson, R. (1996) Electron-crystallographic refinement
of the structure of bacteriorhodopsin. J. Mol. Biol. 259:393–421.
Henderson, R. (1975) The structure of purple membrane from Halobacterium halobium: analysis of the X-ray diffraction
pattern. J. Mol. Biol. 93:123–138.
Hibbs, R.E., Gouaux, E. (2011) Principles of activation and permeation in an anion-selective Cys-loop receptor. Nature
474:54–60.
Hitscherich, C.J., Kaplan, J., Allaman, M., Wiencek, J., Loll, P.J. (2000) Static light scattering studies of OmpF porin:
implications for integral membrane protein crystallization. Protein Sci. 9:1559–1566.
Hunte, C. (2001) Insights from the structure of the yeast cytochrome bc 1 complex: crystallization of membrane proteins
with antibody fragments. FEBS Lett. 504:126–132.
Hunte, C., Koepke, J., Lange, C., Roßmanith, T., Michel, H. (2000) Structure at 2.3 Å resolution of the cytochrome bc 1
complex from the yeast Saccharomyces cerevisiae co-crystallized with an antibody F v fragment. Structure
8:669–684.
Hunte, C., Richers, S. (2008) Lipids and membrane protein structures. Curr. Opin. Struct. Biol. 18:406–411.
Huynh, K.W., Cohen, M.R., Moiseenkova-Bell, V.Y. (2014) Application of amphipols for structure-functional analysis
of TRP channels. J. Membr. Biol. 247:843–851.
Ishchenko, A., Abola, E., Cherezov, V. (2014) Lipidic cubic phase technologies for structural studies of membrane
proteins, in: Mus-Veteau, I., ed., Membrane Proteins Production for Structural Analysis. Springer, New York,
pp. 289–314.
Ishchenko, A., Abola, E.E., Cherezov, V. (2017) Crystallization of membrane proteins: An overview. Methods Mol. Biol.
1607:117–141.
Israelachvili, J.N. (2011) Intermolecular and Surface Forces. 3rd ed., Elsevier/Academic Press, London, 450 p.
Iwata, S., Lee, J.W., Okada, K., Lee, J.K., Iwata, M., Rasmussen, B., Link, T., Ramaswamy, S., Jap, B.K. (1998)
Complete structure of the 11-subunit bovine mitochondrial cytochrome bc 1 complex. Science 281:64–71.
Johansson, L.C., Arnlund, D., White, T.A., Katona, G., DePonte, D.P., Weierstall, U., Doak, R.B., Shoeman, R.L.,
Lomb, L., Malmerberg, E., Davidsson, J., Nass, K., Liang, M., Andreasson, J., Aquila, A., Bajt, S., Barthelmess, M.,
Barty, A., Bogan, M.J., Bostedt, C., Bozek, J.D., Caleman, C., Coffee, R., Coppola, N., Ekeberg, T., Epp, S.W., Erk,
B., Fleckenstein, H., Foucar, L., Graafsma, H., Gumprecht, L., Hajdu, J., Hampton, C.Y., Hartmann, R., Hartmann,
A., Hauser, G., Hirsemann, H., Holl, P., Hunter, M.S., Kassemeyer, S., Kimmel, N., Kirian, R.A., Maia, F.R.N.C.,
Marchesini, S., Martin, A.V., Reich, C., Rolles, D., Rudek, B., Rudenko, A., Schlichting, I., Schulz, J., Seibert, M.M.,
Sierra, R.G., Soltau, H., Starodub, D., Stellato, F., Stern, S., Strüder, L., Timneanu, N., Ullrich, J., Wahlgren, W.Y.,
Wang, X., Weidenspointner, G., Wunderer, C., Fromme, P., Chapman, H.N., Spence, J.C.H., Neutze, R. (2012)
Lipidic phase membrane protein serial femtosecond crystallography. Nat. Meth. 9:263–265.
Johansson, L.C., Wöhri, A.B., Katona, G., Engström, S., Neutze, R. (2009) Membrane protein crystallization from lipidic
phases. Curr. Opin. Struct. Biol. 19:372–378.
Jones, T.A., Zhou, J.-Y., Cowan, S.J., Kjeldgaard, M. (1991) Improved methods for building protein models in electron
density maps and the location of errors on these models. Acta Crystallogr. A 47:110–119.
Jost, C., Plückthun, A. (2014) Engineered proteins with desired specificity: DARPins, other alternative scaffolds and
bispecific IgGs. Curr. Opin. Struct. Biol. 27:102–112.
Kang, H.J., Lee, C., Drew, D. (2013) Breaking the barriers in membrane protein crystallography. Int. J. Biochem. Cell
Biol. 45:636–644.
Kang, Y., Zhou, X.E., Gao, X., He, Y., Liu, W., Ishchenko, A., Barty, A., White, T.A., Yefanov, O., Han, G.W., Xu, Q.,
deWaal, P.W., Ke, J., Tan, M.H.E., Zhang, C., Moeller, A., West, G.M., Pascal, B.D., Van Eps, N., Caro, L.N.,
Vishnivetskiy, S.A., Lee, R.J., Suino-Powell, K.M., Gu, X., Pal, K., Ma, J., Zhi, X., Boutet, S., Williams, G.J.,
Messerschmidt, M., Gati, C., Zatsepin, N.A., Wang, D., James, D., Basu, S., Roy-Chowdhury, S., Conrad, C.E., Coe,
J., Liu, H., Lisova, S., Kupitz, C., Grotjohann, I., Fromme, R., Jiang, Y., Tan, M., Yang, H., Li, J., Wang, M., Zheng,
Z., Li, D., Howe, N., Zhao, Y., Standfuss, J., Diederichs, K., Dong, Y., Potter, C.S., Carragher, B., Caffrey, M., Jiang,
H., Chapman, H.N., Spence, J.C.H., Fromme, P., Weierstall, U., Ernst, O.P., Katritch, V., Gurevich, V.V., Griffin, P.
R., Hubbell, W.L., Stevens, R.C., Cherezov, V., Melcher, K., Xu, E. (2015) Crystal structure of rhodopsin bound to
arrestin by femtosecond X-ray laser. Nature 523:561–567.
Kleinschmidt, J.H., Popot, J.-L. (2014) Folding and stability of integral membrane proteins in amphipols. Arch. Biochem.
Biophys. 564:327–343.
Kühlbrandt, W. (1988) Three-dimensional crystallization of membrane proteins. Quat. Rev. Biophys. 21:429–477.
Kupitz, C., Basu, S., Grotjohann, I., Fromme, R., Zatsepin, N.A., Rendek, K.N., Hunter, M.S., Shoeman, R.L., White, T.
A., Wang, D., James, D., Yang, J.H., Cobb, D.E., Reeder, B., Sierra, R.G., Liu, H., Barty, A., Aquila, A.L., Deponte,
D., Kirian, R.A., Bari, S., Bergkamp, J.J., Beyerlein, K.R., Bogan, M.J., Caleman, C., Chao, T.C., Conrad, C.E.,
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527
M., Nielsen, T.T., Olesen, C., Møller, J.V., Nissen, P., Morth, J.P. (2011) HiLiDe–systematic approach to membrane
protein crystallization in lipid and detergent. Cryst. Growth Des. 11:2098–2106.
Grigorieff, N., Ceska, T.A., Downing, K.H., Baldwin, J.M., Henderson, R. (1996) Electron-crystallographic refinement
of the structure of bacteriorhodopsin. J. Mol. Biol. 259:393–421.
Henderson, R. (1975) The structure of purple membrane from Halobacterium halobium: analysis of the X-ray diffraction
pattern. J. Mol. Biol. 93:123–138.
Hibbs, R.E., Gouaux, E. (2011) Principles of activation and permeation in an anion-selective Cys-loop receptor. Nature
474:54–60.
Hitscherich, C.J., Kaplan, J., Allaman, M., Wiencek, J., Loll, P.J. (2000) Static light scattering studies of OmpF porin:
implications for integral membrane protein crystallization. Protein Sci. 9:1559–1566.
Hunte, C. (2001) Insights from the structure of the yeast cytochrome bc 1 complex: crystallization of membrane proteins
with antibody fragments. FEBS Lett. 504:126–132.
Hunte, C., Koepke, J., Lange, C., Roßmanith, T., Michel, H. (2000) Structure at 2.3 Å resolution of the cytochrome bc 1
complex from the yeast Saccharomyces cerevisiae co-crystallized with an antibody F v fragment. Structure
8:669–684.
Hunte, C., Richers, S. (2008) Lipids and membrane protein structures. Curr. Opin. Struct. Biol. 18:406–411.
Huynh, K.W., Cohen, M.R., Moiseenkova-Bell, V.Y. (2014) Application of amphipols for structure-functional analysis
of TRP channels. J. Membr. Biol. 247:843–851.
Ishchenko, A., Abola, E., Cherezov, V. (2014) Lipidic cubic phase technologies for structural studies of membrane
proteins, in: Mus-Veteau, I., ed., Membrane Proteins Production for Structural Analysis. Springer, New York,
pp. 289–314.
Ishchenko, A., Abola, E.E., Cherezov, V. (2017) Crystallization of membrane proteins: An overview. Methods Mol. Biol.
1607:117–141.
Israelachvili, J.N. (2011) Intermolecular and Surface Forces. 3rd ed., Elsevier/Academic Press, London, 450 p.
Iwata, S., Lee, J.W., Okada, K., Lee, J.K., Iwata, M., Rasmussen, B., Link, T., Ramaswamy, S., Jap, B.K. (1998)
Complete structure of the 11-subunit bovine mitochondrial cytochrome bc 1 complex. Science 281:64–71.
Johansson, L.C., Arnlund, D., White, T.A., Katona, G., DePonte, D.P., Weierstall, U., Doak, R.B., Shoeman, R.L.,
Lomb, L., Malmerberg, E., Davidsson, J., Nass, K., Liang, M., Andreasson, J., Aquila, A., Bajt, S., Barthelmess, M.,
Barty, A., Bogan, M.J., Bostedt, C., Bozek, J.D., Caleman, C., Coffee, R., Coppola, N., Ekeberg, T., Epp, S.W., Erk,
B., Fleckenstein, H., Foucar, L., Graafsma, H., Gumprecht, L., Hajdu, J., Hampton, C.Y., Hartmann, R., Hartmann,
A., Hauser, G., Hirsemann, H., Holl, P., Hunter, M.S., Kassemeyer, S., Kimmel, N., Kirian, R.A., Maia, F.R.N.C.,
Marchesini, S., Martin, A.V., Reich, C., Rolles, D., Rudek, B., Rudenko, A., Schlichting, I., Schulz, J., Seibert, M.M.,
Sierra, R.G., Soltau, H., Starodub, D., Stellato, F., Stern, S., Strüder, L., Timneanu, N., Ullrich, J., Wahlgren, W.Y.,
Wang, X., Weidenspointner, G., Wunderer, C., Fromme, P., Chapman, H.N., Spence, J.C.H., Neutze, R. (2012)
Lipidic phase membrane protein serial femtosecond crystallography. Nat. Meth. 9:263–265.
Johansson, L.C., Wöhri, A.B., Katona, G., Engström, S., Neutze, R. (2009) Membrane protein crystallization from lipidic
phases. Curr. Opin. Struct. Biol. 19:372–378.
Jones, T.A., Zhou, J.-Y., Cowan, S.J., Kjeldgaard, M. (1991) Improved methods for building protein models in electron
density maps and the location of errors on these models. Acta Crystallogr. A 47:110–119.
Jost, C., Plückthun, A. (2014) Engineered proteins with desired specificity: DARPins, other alternative scaffolds and
bispecific IgGs. Curr. Opin. Struct. Biol. 27:102–112.
Kang, H.J., Lee, C., Drew, D. (2013) Breaking the barriers in membrane protein crystallography. Int. J. Biochem. Cell
Biol. 45:636–644.
Kang, Y., Zhou, X.E., Gao, X., He, Y., Liu, W., Ishchenko, A., Barty, A., White, T.A., Yefanov, O., Han, G.W., Xu, Q.,
deWaal, P.W., Ke, J., Tan, M.H.E., Zhang, C., Moeller, A., West, G.M., Pascal, B.D., Van Eps, N., Caro, L.N.,
Vishnivetskiy, S.A., Lee, R.J., Suino-Powell, K.M., Gu, X., Pal, K., Ma, J., Zhi, X., Boutet, S., Williams, G.J.,
Messerschmidt, M., Gati, C., Zatsepin, N.A., Wang, D., James, D., Basu, S., Roy-Chowdhury, S., Conrad, C.E., Coe,
J., Liu, H., Lisova, S., Kupitz, C., Grotjohann, I., Fromme, R., Jiang, Y., Tan, M., Yang, H., Li, J., Wang, M., Zheng,
Z., Li, D., Howe, N., Zhao, Y., Standfuss, J., Diederichs, K., Dong, Y., Potter, C.S., Carragher, B., Caffrey, M., Jiang,
H., Chapman, H.N., Spence, J.C.H., Fromme, P., Weierstall, U., Ernst, O.P., Katritch, V., Gurevich, V.V., Griffin, P.
R., Hubbell, W.L., Stevens, R.C., Cherezov, V., Melcher, K., Xu, E. (2015) Crystal structure of rhodopsin bound to
arrestin by femtosecond X-ray laser. Nature 523:561–567.
Kleinschmidt, J.H., Popot, J.-L. (2014) Folding and stability of integral membrane proteins in amphipols. Arch. Biochem.
Biophys. 564:327–343.
Kühlbrandt, W. (1988) Three-dimensional crystallization of membrane proteins. Quat. Rev. Biophys. 21:429–477.
Kupitz, C., Basu, S., Grotjohann, I., Fromme, R., Zatsepin, N.A., Rendek, K.N., Hunter, M.S., Shoeman, R.L., White, T.
A., Wang, D., James, D., Yang, J.H., Cobb, D.E., Reeder, B., Sierra, R.G., Liu, H., Barty, A., Aquila, A.L., Deponte,
D., Kirian, R.A., Bari, S., Bergkamp, J.J., Beyerlein, K.R., Bogan, M.J., Caleman, C., Chao, T.C., Conrad, C.E.,
References
527