Broecker, J., Eger, B.T., Ernst, O.P. (2017) Crystallogenesis of membrane proteins mediated by polymer-bounded lipid
nanodiscs. Structure 25:384–392.
Cantor, C.R., Schimmel, P.R. (1980) Biophysical Chemistry. Part II: Techniques for the study of biological structure and
function. W.H. Freeman and company, San Francisco, 846 p.
Carruthers, L.M., Schirf, V.R., Demeller, B., Hansen, J.C. (2000) Sedimentation velocity analysis of macromolecular
assemblies. Meth. Enzymol. 321:67–80.
Catoire, L.J., Zoonens, M., van Heijenoort, C., Giusti, F., Popot, J.-L., Guittet, E. (2009) Inter- and intramolecular
contacts in a membrane protein/surfactant complex observed by heteronuclear dipole-to-dipole cross-relaxation.
J. Magn. Res. 197:91–95.
Catoire, L.J., Zoonens, M., van Heijenoort, C., Giusti, F., Guittet, E., Popot, J.-L. (2010) Solution NMR mapping of
water-accessible residues in the transmembrane β-barrel of OmpX. Eur. Biophys. J. 39:623–630.
Champeil, P., Menguy, T., Tribet, C., Popot, J.-L., le Maire, M. (2000) Interaction of amphipols with the sarcoplasmic
reticulum Ca
2+ -ATPase. J. Biol. Chem. 275:18623–18637.
Champeil, P., Menguy, T., Tribet, C., Popot, J.-L., le Maire, M. (2000b) Long-term protection of solubilized sarcoplasmic reticulum Ca
2+ -ATPase by an amphipathic polymer, amphipol A8-35, in: Kaya, K.T.S, ed., Na/K-ATPase and
Related ATPases. Elsevier Science B.V., Amsterdam, pp. 209–212.
Charvolin, D., Picard, M., Huang, L.-S., Berry, E.A., Popot, J.-L. (2014) Solution behavior and crystallization of
cytochrome bc 1 in the presence of amphipols. J. Membr. Biol. 247:981–996.
Constantine, M., Liew, C.K., Lo, V., Macmillan, A., Cranfield, C.G., Sunde, M., Whan, R., Graham, R.M., Martinac,
B. (2016) Heterologously-expressed and liposome-reconstituted human transient receptor potential melastatin 4 channel (TRPM4) is a functional tetramer. Sci. Rep. 6:19352.
Cvetkov, T.L., Huynh, K.W., Cohen, M.R., Moiseenkova-Bell, V.Y. (2011) Molecular architecture and subunit organization of TRPA1 ion channel revealed by electron microscopy. J. Biol. Chem. 286:38168–38176.
Dahmane, T. (2007) Protéines membranaires et amphipols : stabilisation, fonction, renaturation, et développement
d’amphipols sulfonatés pour la RMN des solutions. Thèse de Doctorat, Université Paris-7, Paris, 229 p.
Dahmane, T., Damian, M., Mary, S., Popot, J.-L., Banères, J.-L. (2009) Amphipol-assisted in vitro folding of G proteincoupled receptors. Biochemistry 48:6516–6521.
Dahmane, T., Giusti, F., Catoire, L.J., Popot, J.-L. (2011) Sulfonated amphipols: Synthesis, properties and applications.
Biopolymers 95:811–823.
Dahmane, T., Rappaport, F., Popot, J.-L. (2013) Amphipol-assisted folding of bacteriorhodopsin in the presence and
absence of lipids. Functional consequences. Eur. Biophys. J. 42:85–101.
Deniaud, A., Panwar, P., Frelet-Barrand, A., Bernaudat, F., Juillan-Binard, C., Ebel, C., Rolland, N., Pebay-Peyroula,
E. (2012) Oligomeric status and nucleotide binding properties of the plastid ATP/ADP transporter 1: Toward a
molecular understanding of the transport mechanism. PLoS ONE 7:e32325.
Diab, C., Tribet, C., Gohon, Y., Popot, J.-L., Winnik, F.M. (2007) Complexation of integral membrane proteins by
phosphorylcholine-based amphipols. Biochim. Biophys. Acta 1768:2737–2747.
Ebel, C. (2011) Sedimentation velocity to characterize surfactants and solubilized membrane proteins. Methods
54:56–66.
Elter, S., Raschle, T., Arens, S., Viegas, A., Gelev, V., Etzkorn, M., Wagner, G. (2014) The use of amphipols for NMR
structural characterization of 7-TM proteins. J. Membr. Biol. 247:957–964.
Etzkorn, M., Raschle, T., Hagn, F., Gelev, V., Rice, A.J., Walz, T., Wagner, G. (2013) Cell-free expressed bacteriorhodopsin in different soluble membrane mimetics: biophysical properties and NMR accessibility. Structure
21:394–401.
Etzkorn, M., Zoonens, M., Catoire, L.J., Popot, J.-L., Hiller, S. (2014) How amphipols embed membrane proteins:
Global solvent accessibility and interaction with a flexible protein terminus. J. Membr. Biol. 247:965–970.
Fernández, C., Adeishvili, K., Wüthrich, K. (2001) Transverse relaxation-optimized NMR spectroscopy with the outer
membrane protein OmpX in dihexanoyl phosphatidylcholine micelles. Proc. Natl. Acad. Sci. USA 98:2358–2363.
Ferrandez, Y., Dezi, M., Bosco, M., Urvoas, A., Valério, M., Le Bon, C., Giusti, F., Broutin, I., Durand, G., Polidori, A.,
Popot, J.-L., Picard, M., Minard, P. (2014) Amphipol-mediated screening of molecular orthoses specific for
membrane protein targets. J. Membr. Biol. 247:925–940.
Fitzpatrick, A.W.P., Llabrés, S., Neuberger, A., Blaza, J.N., Bai, X.-C., Okada, U., Murakami, S., van Veen, H.W.,
Zachariae, U., Scheres, S.H.W., Luisi, B.F., Du, D. (2017) Structure of the MacAB-TolC ABC-type tripartite
multidrug efflux pump. Nat. Microbiol. 2:17070.
Franke, D., Svergun, D.I. (2009) DAMMIF, a program for rapid ab initio shape determination in small-angle scattering.
J. Appl. Cryst. 42:342–346.
Giusti, F., Rieger, J., Catoire, L.J., Qian, S., Calabrese, A.N., Watkinson, T.G., Casiraghi, M., Radford, S.E., Ashcroft, A.
E., Popot, J.-L. (2014) Synthesis, characterization and applications of a perdeuterated amphipol. J. Membr. Biol.
247:909–924.
References
449
nanodiscs. Structure 25:384–392.
Cantor, C.R., Schimmel, P.R. (1980) Biophysical Chemistry. Part II: Techniques for the study of biological structure and
function. W.H. Freeman and company, San Francisco, 846 p.
Carruthers, L.M., Schirf, V.R., Demeller, B., Hansen, J.C. (2000) Sedimentation velocity analysis of macromolecular
assemblies. Meth. Enzymol. 321:67–80.
Catoire, L.J., Zoonens, M., van Heijenoort, C., Giusti, F., Popot, J.-L., Guittet, E. (2009) Inter- and intramolecular
contacts in a membrane protein/surfactant complex observed by heteronuclear dipole-to-dipole cross-relaxation.
J. Magn. Res. 197:91–95.
Catoire, L.J., Zoonens, M., van Heijenoort, C., Giusti, F., Guittet, E., Popot, J.-L. (2010) Solution NMR mapping of
water-accessible residues in the transmembrane β-barrel of OmpX. Eur. Biophys. J. 39:623–630.
Champeil, P., Menguy, T., Tribet, C., Popot, J.-L., le Maire, M. (2000) Interaction of amphipols with the sarcoplasmic
reticulum Ca
2+ -ATPase. J. Biol. Chem. 275:18623–18637.
Champeil, P., Menguy, T., Tribet, C., Popot, J.-L., le Maire, M. (2000b) Long-term protection of solubilized sarcoplasmic reticulum Ca
2+ -ATPase by an amphipathic polymer, amphipol A8-35, in: Kaya, K.T.S, ed., Na/K-ATPase and
Related ATPases. Elsevier Science B.V., Amsterdam, pp. 209–212.
Charvolin, D., Picard, M., Huang, L.-S., Berry, E.A., Popot, J.-L. (2014) Solution behavior and crystallization of
cytochrome bc 1 in the presence of amphipols. J. Membr. Biol. 247:981–996.
Constantine, M., Liew, C.K., Lo, V., Macmillan, A., Cranfield, C.G., Sunde, M., Whan, R., Graham, R.M., Martinac,
B. (2016) Heterologously-expressed and liposome-reconstituted human transient receptor potential melastatin 4 channel (TRPM4) is a functional tetramer. Sci. Rep. 6:19352.
Cvetkov, T.L., Huynh, K.W., Cohen, M.R., Moiseenkova-Bell, V.Y. (2011) Molecular architecture and subunit organization of TRPA1 ion channel revealed by electron microscopy. J. Biol. Chem. 286:38168–38176.
Dahmane, T. (2007) Protéines membranaires et amphipols : stabilisation, fonction, renaturation, et développement
d’amphipols sulfonatés pour la RMN des solutions. Thèse de Doctorat, Université Paris-7, Paris, 229 p.
Dahmane, T., Damian, M., Mary, S., Popot, J.-L., Banères, J.-L. (2009) Amphipol-assisted in vitro folding of G proteincoupled receptors. Biochemistry 48:6516–6521.
Dahmane, T., Giusti, F., Catoire, L.J., Popot, J.-L. (2011) Sulfonated amphipols: Synthesis, properties and applications.
Biopolymers 95:811–823.
Dahmane, T., Rappaport, F., Popot, J.-L. (2013) Amphipol-assisted folding of bacteriorhodopsin in the presence and
absence of lipids. Functional consequences. Eur. Biophys. J. 42:85–101.
Deniaud, A., Panwar, P., Frelet-Barrand, A., Bernaudat, F., Juillan-Binard, C., Ebel, C., Rolland, N., Pebay-Peyroula,
E. (2012) Oligomeric status and nucleotide binding properties of the plastid ATP/ADP transporter 1: Toward a
molecular understanding of the transport mechanism. PLoS ONE 7:e32325.
Diab, C., Tribet, C., Gohon, Y., Popot, J.-L., Winnik, F.M. (2007) Complexation of integral membrane proteins by
phosphorylcholine-based amphipols. Biochim. Biophys. Acta 1768:2737–2747.
Ebel, C. (2011) Sedimentation velocity to characterize surfactants and solubilized membrane proteins. Methods
54:56–66.
Elter, S., Raschle, T., Arens, S., Viegas, A., Gelev, V., Etzkorn, M., Wagner, G. (2014) The use of amphipols for NMR
structural characterization of 7-TM proteins. J. Membr. Biol. 247:957–964.
Etzkorn, M., Raschle, T., Hagn, F., Gelev, V., Rice, A.J., Walz, T., Wagner, G. (2013) Cell-free expressed bacteriorhodopsin in different soluble membrane mimetics: biophysical properties and NMR accessibility. Structure
21:394–401.
Etzkorn, M., Zoonens, M., Catoire, L.J., Popot, J.-L., Hiller, S. (2014) How amphipols embed membrane proteins:
Global solvent accessibility and interaction with a flexible protein terminus. J. Membr. Biol. 247:965–970.
Fernández, C., Adeishvili, K., Wüthrich, K. (2001) Transverse relaxation-optimized NMR spectroscopy with the outer
membrane protein OmpX in dihexanoyl phosphatidylcholine micelles. Proc. Natl. Acad. Sci. USA 98:2358–2363.
Ferrandez, Y., Dezi, M., Bosco, M., Urvoas, A., Valério, M., Le Bon, C., Giusti, F., Broutin, I., Durand, G., Polidori, A.,
Popot, J.-L., Picard, M., Minard, P. (2014) Amphipol-mediated screening of molecular orthoses specific for
membrane protein targets. J. Membr. Biol. 247:925–940.
Fitzpatrick, A.W.P., Llabrés, S., Neuberger, A., Blaza, J.N., Bai, X.-C., Okada, U., Murakami, S., van Veen, H.W.,
Zachariae, U., Scheres, S.H.W., Luisi, B.F., Du, D. (2017) Structure of the MacAB-TolC ABC-type tripartite
multidrug efflux pump. Nat. Microbiol. 2:17070.
Franke, D., Svergun, D.I. (2009) DAMMIF, a program for rapid ab initio shape determination in small-angle scattering.
J. Appl. Cryst. 42:342–346.
Giusti, F., Rieger, J., Catoire, L.J., Qian, S., Calabrese, A.N., Watkinson, T.G., Casiraghi, M., Radford, S.E., Ashcroft, A.
E., Popot, J.-L. (2014) Synthesis, characterization and applications of a perdeuterated amphipol. J. Membr. Biol.
247:909–924.
References
449