205. Sun X, Gezelter JD (2008) Dipolar ordering in the ripple phases of molecular-scale models of
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206. Jamroz D, Kepczynski M, Nowakowska M (2010) Molecular structure of the dioctadecyldimethylammonium bromide (DODAB) bilayer. Langmuir 26(15):076–15079
207. Chen R, Poger D, Mark AE (2011) Effect of high pressure on fully hydrated DPPC and POPC
bilayers. J Phys Chem B 115:1038–1044
208. Dolezel S (2010) Computer simulation of lipid bilayers. Diploma thesis, University of Mainz
209. Brazovskii SA (1975) Phase transitions of an isotropic system to a nonuniform state. Soviet
Phys JETP 41:85–89
210. Marsh D (2008) Protein modulation of lipids, and vice-versa, in membranes. Biochim
Biophys Acta 1778:1545–1575
211. Benjamini A, Smit B (2012) Robust driving forces for transmembrane helix packing. Biophys
J 103:1227–1235
212. Cantor RS (1997) Lateral pressures in cell membranes: a mechanism for modulation of
protein function. J Phys Chem B 101:1723–1725
213. Elliott J, Needham D, Dilger J, Haydon D (1983) The effects of bilayer thickness and tension
on gramicidin single-channel lifetimes. Biochim Biophys Acta 735:95–103
214. Botelho AV, Huber T, Sakmar TP, Brown MF (2006) Curvature and hydrophobic forces
drive oligomerization and modulate activity of rhodopsin in membranes. Biophys J
91:4464–4477
215. Antonny B (2006) Membrane deformation by protein coats. Curr Opin Cell Biol 18
(4):386–394
216. Lee AG (2005) How lipids and proteins interact in a membrane: a molecular approach. Mol
Biosyst 3:203–212
217. Gil T, Sabra MC, Ipsen JH, Mouritsen OG (1997) Wetting and capillary condensation as
means of protein organization in membranes. Biophys J 73(4):1728–1741
218. Gil T, Ipsen JH, Mouritsen OG, Sabra MC, Sperotto MM, Zuckermann MJ (1998) Theoretical analysis of protein organization in lipid membranes. Biochim Biophys Acta 1376
(3):245–266
219. Reynwar BJ, Deserno M (2008) Membrane composition-mediated protein–protein interactions. Biointerphases 3:FA117–FA125
220. Machta BB, Veatch SL, Sethna JP (2012) Critical Casimir forces in cellular membranes. Phys
Rev Lett 109:138101
221. May S, Ben-Shaul A (1999) Molecular theory of lipid-protein interaction and the Lalpha-HII
transition. Biophys J 76(2):751–767
222. May S (2000) Protein-induced bilayer deformations: the lipid tilt degree of freedom. Eur
Biophys J 29(1):17–28
223. Kozlovsky Y, Zimmerberg J, Kozlov MM (2004) Orientation and interaction of oblique
cylindrical inclusions embedded in a lipid monolayer: a theoretical model for viral fusion
peptides. Biophys J 87(2):999–1012
224. Deserno M (2009) Membrane elasticity and mediated interactions in continuum theory: a
differential geometric approach. In: Faller R, Jue T, Longo ML, Risbud SH (eds)
Biomembrane frontiers: nanostructures, models, and the design of life, vol 2. Springer,
New York, pp 41–74
225. May S (2000) Theories on structural perturbations of lipid bilayers. Curr Opin Colloid
Interface Sci 5:244–249
226. Bloom M, Evans E, Mouritsen OG (1991) Physical properties of the fluid lipid-bilayer
component of cell membranes: a perspective. Quart Rev Biophys 24(3):293–297
227. Killian JA (1998) Hydrophobic mismatch between proteins and lipids in membranes.
Biochim Biophys Acta 1376:401–416
228. Dumas F, Lebrun MC, Tocanne JF (1999) Is the protein/lipid hydrophobic matching principle
relevant to membrane organization and functions? FEBS Lett 458:271–277
Computational Studies of Biomembrane Systems: Theoretical Considerations. . .
279
lipid membranes. J Phys Chem B 112:1968–1975
206. Jamroz D, Kepczynski M, Nowakowska M (2010) Molecular structure of the dioctadecyldimethylammonium bromide (DODAB) bilayer. Langmuir 26(15):076–15079
207. Chen R, Poger D, Mark AE (2011) Effect of high pressure on fully hydrated DPPC and POPC
bilayers. J Phys Chem B 115:1038–1044
208. Dolezel S (2010) Computer simulation of lipid bilayers. Diploma thesis, University of Mainz
209. Brazovskii SA (1975) Phase transitions of an isotropic system to a nonuniform state. Soviet
Phys JETP 41:85–89
210. Marsh D (2008) Protein modulation of lipids, and vice-versa, in membranes. Biochim
Biophys Acta 1778:1545–1575
211. Benjamini A, Smit B (2012) Robust driving forces for transmembrane helix packing. Biophys
J 103:1227–1235
212. Cantor RS (1997) Lateral pressures in cell membranes: a mechanism for modulation of
protein function. J Phys Chem B 101:1723–1725
213. Elliott J, Needham D, Dilger J, Haydon D (1983) The effects of bilayer thickness and tension
on gramicidin single-channel lifetimes. Biochim Biophys Acta 735:95–103
214. Botelho AV, Huber T, Sakmar TP, Brown MF (2006) Curvature and hydrophobic forces
drive oligomerization and modulate activity of rhodopsin in membranes. Biophys J
91:4464–4477
215. Antonny B (2006) Membrane deformation by protein coats. Curr Opin Cell Biol 18
(4):386–394
216. Lee AG (2005) How lipids and proteins interact in a membrane: a molecular approach. Mol
Biosyst 3:203–212
217. Gil T, Sabra MC, Ipsen JH, Mouritsen OG (1997) Wetting and capillary condensation as
means of protein organization in membranes. Biophys J 73(4):1728–1741
218. Gil T, Ipsen JH, Mouritsen OG, Sabra MC, Sperotto MM, Zuckermann MJ (1998) Theoretical analysis of protein organization in lipid membranes. Biochim Biophys Acta 1376
(3):245–266
219. Reynwar BJ, Deserno M (2008) Membrane composition-mediated protein–protein interactions. Biointerphases 3:FA117–FA125
220. Machta BB, Veatch SL, Sethna JP (2012) Critical Casimir forces in cellular membranes. Phys
Rev Lett 109:138101
221. May S, Ben-Shaul A (1999) Molecular theory of lipid-protein interaction and the Lalpha-HII
transition. Biophys J 76(2):751–767
222. May S (2000) Protein-induced bilayer deformations: the lipid tilt degree of freedom. Eur
Biophys J 29(1):17–28
223. Kozlovsky Y, Zimmerberg J, Kozlov MM (2004) Orientation and interaction of oblique
cylindrical inclusions embedded in a lipid monolayer: a theoretical model for viral fusion
peptides. Biophys J 87(2):999–1012
224. Deserno M (2009) Membrane elasticity and mediated interactions in continuum theory: a
differential geometric approach. In: Faller R, Jue T, Longo ML, Risbud SH (eds)
Biomembrane frontiers: nanostructures, models, and the design of life, vol 2. Springer,
New York, pp 41–74
225. May S (2000) Theories on structural perturbations of lipid bilayers. Curr Opin Colloid
Interface Sci 5:244–249
226. Bloom M, Evans E, Mouritsen OG (1991) Physical properties of the fluid lipid-bilayer
component of cell membranes: a perspective. Quart Rev Biophys 24(3):293–297
227. Killian JA (1998) Hydrophobic mismatch between proteins and lipids in membranes.
Biochim Biophys Acta 1376:401–416
228. Dumas F, Lebrun MC, Tocanne JF (1999) Is the protein/lipid hydrophobic matching principle
relevant to membrane organization and functions? FEBS Lett 458:271–277
Computational Studies of Biomembrane Systems: Theoretical Considerations. . .
279