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Lakshminarayanan B, O’Sullivan O, Fitzgerald GF, Deane J, O’Connor M, Harnedy N,
O’Connor K, O’Mahony D, van Sinderen D, Wallace M, Brennan L, Stanton C, Marchesi JR,
Fitzgerald AP, Shanahan F, Hill C, Ross RP, O’Toole PW (2012) Gut microbiota composition
correlates with diet and health in the elderly. Nature 488(7410):178–184. https://doi.org/10.
1038/nature11319
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vol 3. Cambridge University Press, London
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Neuroimmunol 233(1-2):6–11. https://doi.org/10.1016/j.jneuroim.2011.01.002
Dalile B, Van Oudenhove L, Vervliet B, Verbeke K (2019) The role of short-chain fatty acids in
microbiota–gut–brain communication. Nat Rev Gastroenterol Hepatol 16(8):461–478. https://
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Davenport ER, Sanders JG, Song SJ, Amato KR, Clark AG, Knight R (2017) The human
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David LA, Maurice CF, Carmody RN, Gootenberg DB, Button JE, Wolfe BE, Ling AV, Devlin AS,
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reproducibly alters the human gut microbiome. Nature 505(7484):559–563. https://doi.org/10.
1038/nature12820
de Castro J-AA, Guno MJV-R, Perez MO (2019) Bacillus clausii as adjunctive treatment for acute
community-acquired diarrhea among Filipino children: a large-scale, multicenter, open-label
study (CODDLE). Trop Dis Travel Med Vaccines 5:14–14. https://doi.org/10.1186/s40794019-0089-5
De Filippo C, Cavalieri D, Di Paola M, Ramazzotti M, Poullet JB, Massart S, Collini S,
Pieraccini G, Lionetti P (2010) Impact of diet in shaping gut microbiota revealed by a
comparative study in children from Europe and rural Africa. Proc Natl Acad Sci U S A 107
(33):14691–14696. https://doi.org/10.1073/pnas.1005963107
Degroote S, Hunting DJ, Baccarelli AA, Takser L (2016) Maternal gut and fetal brain connection:
Increased anxiety and reduced social interactions in Wistar rat offspring following periconceptional antibiotic exposure. Prog Neuropsychopharmacol Biol Psychiatry 71:76–82.
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de Keijzer C, Basagaña X, Tonne C, Valentín A, Alonso J, Antó JM, Nieuwenhuijsen MJ,
Kivimäki M, Singh-Manoux A, Sunyer J, Dadvand P (2019) Long-term exposure to greenspace
and metabolic syndrome: A Whitehall II study. Environ Pollut 255:113231. https://doi.org/10.
1016/j.envpol.2019.113231
de Mazancourt C, Johnson E, Barraclough TG (2008) Biodiversity inhibits species’ evolutionary
responses to changing environments. Ecol Lett 11(4):380–388. https://doi.org/10.1111/j.14610248.2008.01152.x
Derrien M, Johan ET, Vlieg H (2015) Fate, activity, and impact of ingested bacteria within the
human gut microbiota. Trends Microbiol 23(6):354–366
Diaz Heijtz R, Wang S, Anuar F, Qian Y, Bjorkholm B, Samuelsson A, Hibberd ML, Forssberg H,
Pettersson S (2011) Normal gut microbiota modulates brain development and behavior. Proc
Natl Acad Sci U S A 108(7):3047–3052. https://doi.org/10.1073/pnas.1010529108
Domazet-Loso T, Tautz D (2008) An ancient evolutionary origin of genes associated with human
genetic diseases. Mol Biol Evol 25(12):2699–2707. https://doi.org/10.1093/molbev/msn214
Donaldson GP, Ladinsky MS, Yu KB, Sanders JG, Yoo BB, Chou WC, Conner ME, Earl AM,
Knight R, Bjorkman PJ, Mazmanian SK (2018) Gut microbiota utilize immunoglobulin A for
mucosal colonization. Science (New York, NY) 360(6390):795–800. https://doi.org/10.1126/
science.aaq0926
Dong Z, Xiong L, Zhang W, Gibson PG, Wang T, Lu Y, Wang G, Li H, Wang F (2016) Holding the
inflammatory system in check: TLRs and their targeted therapy in asthma. Mediators Inflamm
2016:8. https://doi.org/10.1155/2016/2180417
356
G. A. W. Rook
Lakshminarayanan B, O’Sullivan O, Fitzgerald GF, Deane J, O’Connor M, Harnedy N,
O’Connor K, O’Mahony D, van Sinderen D, Wallace M, Brennan L, Stanton C, Marchesi JR,
Fitzgerald AP, Shanahan F, Hill C, Ross RP, O’Toole PW (2012) Gut microbiota composition
correlates with diet and health in the elderly. Nature 488(7410):178–184. https://doi.org/10.
1038/nature11319
Clark JD (2001) Kalambo falls prehistoric site. The earlier cultures: middle and earlier stone age,
vol 3. Cambridge University Press, London
Correale J, Farez MF (2011) The impact of parasite infections on the course of multiple sclerosis. J
Neuroimmunol 233(1-2):6–11. https://doi.org/10.1016/j.jneuroim.2011.01.002
Dalile B, Van Oudenhove L, Vervliet B, Verbeke K (2019) The role of short-chain fatty acids in
microbiota–gut–brain communication. Nat Rev Gastroenterol Hepatol 16(8):461–478. https://
doi.org/10.1038/s41575-019-0157-3
Davenport ER, Sanders JG, Song SJ, Amato KR, Clark AG, Knight R (2017) The human
microbiome in evolution. BMC Biol 15(1):127. https://doi.org/10.1186/s12915-017-0454-7
David LA, Maurice CF, Carmody RN, Gootenberg DB, Button JE, Wolfe BE, Ling AV, Devlin AS,
Varma Y, Fischbach MA, Biddinger SB, Dutton RJ, Turnbaugh PJ (2014) Diet rapidly and
reproducibly alters the human gut microbiome. Nature 505(7484):559–563. https://doi.org/10.
1038/nature12820
de Castro J-AA, Guno MJV-R, Perez MO (2019) Bacillus clausii as adjunctive treatment for acute
community-acquired diarrhea among Filipino children: a large-scale, multicenter, open-label
study (CODDLE). Trop Dis Travel Med Vaccines 5:14–14. https://doi.org/10.1186/s40794019-0089-5
De Filippo C, Cavalieri D, Di Paola M, Ramazzotti M, Poullet JB, Massart S, Collini S,
Pieraccini G, Lionetti P (2010) Impact of diet in shaping gut microbiota revealed by a
comparative study in children from Europe and rural Africa. Proc Natl Acad Sci U S A 107
(33):14691–14696. https://doi.org/10.1073/pnas.1005963107
Degroote S, Hunting DJ, Baccarelli AA, Takser L (2016) Maternal gut and fetal brain connection:
Increased anxiety and reduced social interactions in Wistar rat offspring following periconceptional antibiotic exposure. Prog Neuropsychopharmacol Biol Psychiatry 71:76–82.
https://doi.org/10.1016/j.pnpbp.2016.06.010
de Keijzer C, Basagaña X, Tonne C, Valentín A, Alonso J, Antó JM, Nieuwenhuijsen MJ,
Kivimäki M, Singh-Manoux A, Sunyer J, Dadvand P (2019) Long-term exposure to greenspace
and metabolic syndrome: A Whitehall II study. Environ Pollut 255:113231. https://doi.org/10.
1016/j.envpol.2019.113231
de Mazancourt C, Johnson E, Barraclough TG (2008) Biodiversity inhibits species’ evolutionary
responses to changing environments. Ecol Lett 11(4):380–388. https://doi.org/10.1111/j.14610248.2008.01152.x
Derrien M, Johan ET, Vlieg H (2015) Fate, activity, and impact of ingested bacteria within the
human gut microbiota. Trends Microbiol 23(6):354–366
Diaz Heijtz R, Wang S, Anuar F, Qian Y, Bjorkholm B, Samuelsson A, Hibberd ML, Forssberg H,
Pettersson S (2011) Normal gut microbiota modulates brain development and behavior. Proc
Natl Acad Sci U S A 108(7):3047–3052. https://doi.org/10.1073/pnas.1010529108
Domazet-Loso T, Tautz D (2008) An ancient evolutionary origin of genes associated with human
genetic diseases. Mol Biol Evol 25(12):2699–2707. https://doi.org/10.1093/molbev/msn214
Donaldson GP, Ladinsky MS, Yu KB, Sanders JG, Yoo BB, Chou WC, Conner ME, Earl AM,
Knight R, Bjorkman PJ, Mazmanian SK (2018) Gut microbiota utilize immunoglobulin A for
mucosal colonization. Science (New York, NY) 360(6390):795–800. https://doi.org/10.1126/
science.aaq0926
Dong Z, Xiong L, Zhang W, Gibson PG, Wang T, Lu Y, Wang G, Li H, Wang F (2016) Holding the
inflammatory system in check: TLRs and their targeted therapy in asthma. Mediators Inflamm
2016:8. https://doi.org/10.1155/2016/2180417
356
G. A. W. Rook