Jacobs JL, Sundin GW (2001) Effect of Solar UV-B radiation on a phyllosphere bacterial community. Appl Environ Microbiol 67:5488–5496
Jansen MAK, Gaba V, Greenberg BM (1998) Higher plants and UV-B radiation: balancing
damage, repair and acclimation. Trends Plant Sci 3:131–135
Janson EM, Stireman JO III, Singer MS, Abbot P (2008) Phytophagous insect-microbe mutualisms
and adaptive evolutionary diversification. Evolution 62:997–1012
Jiang L, Pu Z, Nemergut DR (2008) On the importance of the negative selection effect for the
relationship between biodiversity and ecosystem functioning. Oikos 117:488–493
Jin Song S, Woodhams DC, Martino C, Allaband C, Mu A, Javorschi-Miller-Montgomery S,
Suchodolski JS, Knight R (2019) Engineering the microbiome for animal health and conservation. Exp Biol Med 244:494–504
Julliand V, Grimm P (2016) Horse Species Symposium: the microbiome of the horse hindgut:
history and current knowledge. J Anim Sci 94:2262–2274
Kamada N, Chen GY, Inohara N, Núñez G (2013) Control of pathogens and pathobionts by the gut
microbiota. Nat Immunol 14:685–690
Kennedy EV, Tonk L, Foster NL, Chollett I, Ortiz J-C, Dove S, Hoegh-Guldberg O, Mumby PJ,
Stevens JR (2016) Symbiodinium biogeography tracks environmental patterns rather than host
genetics in a key Caribbean reef-builder, Orbicella annularis. Proc Roy Soc B Biol Sci
283:20161938
Kiers ET, Rousseau RA, West SA, Denison RF (2003) Host sanctions and the legume–rhizobium
mutualism. Nature 425:78–81
Knoll AH (2003) Life in a young planet. Princeton University Press, Princeton, NJ
Kobayashi KS, Chamaillard M, Ogura Y, Henegariu O, Inohara N, Nuñez G, Flavell RA (2005)
Nod2-dependent regulation of innate and adaptive immunity in the intestinal tract. Science
307:731–734
Koenig JE, Spor A, Scalfone N, Fricker AD, Stombaugh J, Knight R, Angenent LT, Ley RE (2011)
Succession of microbial consortia in the developing infant gut microbiome. Proc Natl Acad Sci
USA 108:4578–4585
Koh A, Bäckhed F (2020) From association to causality: the role of the gut microbiota and its
functional products on host metabolism. Mol Cell 78:584–596
Koropatnick TA, Engle JT, Apicella MA, Stabb EV, Goldman WE, McFall-Ngai MJ (2004)
Microbial factor-mediated development in a host-bacterial mutualism. Science 306:1186–1188
Kraal L, Abubucker S, Kota K, Fischbach MA, Mitreva M (2014) The prevalence of species and
strains in the human microbiome: a resource for experimental efforts. PLoS One 9:e97279
Kraft NJB, Adler PB, Godoy O, James EC, Fuller S, Levine JM (2015) Community assembly,
coexistence and the environmental filtering metaphor. Funct Ecol 29:592–599
Krings M, Taylor TN, Hass H, Kerp H, Dotzler N, Hermsen EJ (2007) Fungal endophytes in a
400-million-yr-old land plant: infection pathways, spatial distribution, and host responses. New
Phytol 174:648–657
Kumar Meena R, Kumar Singh R, Pal Singh N, Kumari Meena S, Singh Meena V (2015) Isolation
of low temperature surviving plant growth – promoting rhizobacteria (PGPR) from pea (Pisum
sativum L.) and documentation of their plant growth promoting traits. Biocatal Agric Biotechnol
4:806–811
Lanan MC, Rodrigues PAP, Agellon A, Jansma P, Wheeler DE (2016) A bacterial filter protects and
structures the gut microbiome of an insect. ISME J 10:1866–1876
Lau JA, Lennon JT (2012) Rapid responses of soil microorganisms improve plant fitness in novel
environments. Proc Natl Acad Sci USA 109:14058–14062
Lauber CL, Ramirez KS, Aanderud Z, Lennon J, Fierer N (2013) Temporal variability in soil
microbial communities across land-use types. ISME J 7:1641–1650
Leatham MP, Banerjee S, Autieri SM, Mercado-Lubo R, Conway T, Cohen PS (2009) Precolonized
human commensal Escherichia coli strains serve as a barrier to E. coli o157:h7 growth in the
streptomycin-treated mouse intestine. Infect Immun 77:2876–2886
17 Diversity–Function Relationships and the Underlying Ecological Mechanisms in. . .
321
Jansen MAK, Gaba V, Greenberg BM (1998) Higher plants and UV-B radiation: balancing
damage, repair and acclimation. Trends Plant Sci 3:131–135
Janson EM, Stireman JO III, Singer MS, Abbot P (2008) Phytophagous insect-microbe mutualisms
and adaptive evolutionary diversification. Evolution 62:997–1012
Jiang L, Pu Z, Nemergut DR (2008) On the importance of the negative selection effect for the
relationship between biodiversity and ecosystem functioning. Oikos 117:488–493
Jin Song S, Woodhams DC, Martino C, Allaband C, Mu A, Javorschi-Miller-Montgomery S,
Suchodolski JS, Knight R (2019) Engineering the microbiome for animal health and conservation. Exp Biol Med 244:494–504
Julliand V, Grimm P (2016) Horse Species Symposium: the microbiome of the horse hindgut:
history and current knowledge. J Anim Sci 94:2262–2274
Kamada N, Chen GY, Inohara N, Núñez G (2013) Control of pathogens and pathobionts by the gut
microbiota. Nat Immunol 14:685–690
Kennedy EV, Tonk L, Foster NL, Chollett I, Ortiz J-C, Dove S, Hoegh-Guldberg O, Mumby PJ,
Stevens JR (2016) Symbiodinium biogeography tracks environmental patterns rather than host
genetics in a key Caribbean reef-builder, Orbicella annularis. Proc Roy Soc B Biol Sci
283:20161938
Kiers ET, Rousseau RA, West SA, Denison RF (2003) Host sanctions and the legume–rhizobium
mutualism. Nature 425:78–81
Knoll AH (2003) Life in a young planet. Princeton University Press, Princeton, NJ
Kobayashi KS, Chamaillard M, Ogura Y, Henegariu O, Inohara N, Nuñez G, Flavell RA (2005)
Nod2-dependent regulation of innate and adaptive immunity in the intestinal tract. Science
307:731–734
Koenig JE, Spor A, Scalfone N, Fricker AD, Stombaugh J, Knight R, Angenent LT, Ley RE (2011)
Succession of microbial consortia in the developing infant gut microbiome. Proc Natl Acad Sci
USA 108:4578–4585
Koh A, Bäckhed F (2020) From association to causality: the role of the gut microbiota and its
functional products on host metabolism. Mol Cell 78:584–596
Koropatnick TA, Engle JT, Apicella MA, Stabb EV, Goldman WE, McFall-Ngai MJ (2004)
Microbial factor-mediated development in a host-bacterial mutualism. Science 306:1186–1188
Kraal L, Abubucker S, Kota K, Fischbach MA, Mitreva M (2014) The prevalence of species and
strains in the human microbiome: a resource for experimental efforts. PLoS One 9:e97279
Kraft NJB, Adler PB, Godoy O, James EC, Fuller S, Levine JM (2015) Community assembly,
coexistence and the environmental filtering metaphor. Funct Ecol 29:592–599
Krings M, Taylor TN, Hass H, Kerp H, Dotzler N, Hermsen EJ (2007) Fungal endophytes in a
400-million-yr-old land plant: infection pathways, spatial distribution, and host responses. New
Phytol 174:648–657
Kumar Meena R, Kumar Singh R, Pal Singh N, Kumari Meena S, Singh Meena V (2015) Isolation
of low temperature surviving plant growth – promoting rhizobacteria (PGPR) from pea (Pisum
sativum L.) and documentation of their plant growth promoting traits. Biocatal Agric Biotechnol
4:806–811
Lanan MC, Rodrigues PAP, Agellon A, Jansma P, Wheeler DE (2016) A bacterial filter protects and
structures the gut microbiome of an insect. ISME J 10:1866–1876
Lau JA, Lennon JT (2012) Rapid responses of soil microorganisms improve plant fitness in novel
environments. Proc Natl Acad Sci USA 109:14058–14062
Lauber CL, Ramirez KS, Aanderud Z, Lennon J, Fierer N (2013) Temporal variability in soil
microbial communities across land-use types. ISME J 7:1641–1650
Leatham MP, Banerjee S, Autieri SM, Mercado-Lubo R, Conway T, Cohen PS (2009) Precolonized
human commensal Escherichia coli strains serve as a barrier to E. coli o157:h7 growth in the
streptomycin-treated mouse intestine. Infect Immun 77:2876–2886
17 Diversity–Function Relationships and the Underlying Ecological Mechanisms in. . .
321