Labadie K, Jourda C, Lengelle J, Rodier-Goud M,
Alberti A, Bernard M, Correa M, Ayyampalayam S,
Mckain MR, Leebens-Mack J, Burgess D, Freeling M,
Mbeguie-A-Mbeguie D, Chabannes M, Wicker T,
Panaud O, Barbosa J, Hribova E, Heslop-Harrison P,
Habas R, Rivallan R, Francois P, Poiron C, Kilian A,
Burthia D, Jenny C, Bakry F, Brown S, Guignon V,
Kema G, Dita M, Waalwijk C, Joseph S, Dievart A,
Jaillon O, Leclercq J, Argout X, Lyons E, Almeida A,
Jeridi M, Dolezel J, Roux N, Risterucci AM, Weissenbach J, Ruiz M, Glaszmann JC, Quetier F,
Yahiaoui N, Wincker P (2012) The banana (Musa
acuminata) genome and the evolution of monocotyledonous plants. Nature 488(7410):213–217
De Leede LG, Humphries JE, Bechet AC, Van Hoogdalem EJ, Verrijk R, Spencer DG (2008) Novel
controlled-release Lemna-derived IFN-alpha2b (Locteron): pharmacokinetics, pharmacodynamics, and
tolerability in a phase I clinical trial. J Interferon
Cytokine Res 28(2):113–122
Lamesch P, Berardini TZ, Li DH, Swarbreck D, Wilks C,
Sasidharan R, Muller R, Dreher K, Alexander DL,
Garcia-Hernandez M, Karthikeyan AS, Lee CH, Nelson WD, Ploetz L, Singh S, Wensel A, Huala E (2012)
The arabidopsis information resource (TAIR):
improved gene annotation and new tools. Nucleic
Acids Res 40(D1):D1202–D1210
Li J, Jain M, Vunsh R, Vishnevetsky J, Hanania U,
Flaishman M, Perl A, Edelman M (2004) Callus
induction and regeneration in Spirodela and Lemna.
Plant Cell Rep 22(7):457–464
Ma YB, Zhu M, Yu CJ, Wang Y, Liu Y, Li ML, Sun YD,
Zhao JS, Zhou GK (2018) Large-scale screening and
characterisation of Lemna aequinoctialis and Spirodela polyrhiza strains for starch production. Plant Biol
(Stuttg) 20(2):357–364
Matsumoto T, Wu JZ, Kanamori H, Katayose Y, Fujisawa M, Namiki N, Mizuno H, Yamamoto K, Antonio BA, Baba T, Sakata K, Nagamura Y, Aoki H,
Arikawa K, Arita K, Bito T, Chiden Y, Fujitsuka N,
Fukunaka R, Hamada M, Harada C, Hayashi A,
Hijishita S, Honda M, Hosokawa S, Ichikawa Y,
Idonuma A, Iijima M, Ikeda M, Ikeno M, Ito K, Ito S,
Ito T, Ito Y, Ito Y, Iwabuchi A, Kamiya K, Karasawa W, Kurita K, Katagiri S, Kikuta A, Kobayashi H,
Kobayashi N, Machita K, Maehara T, Masukawa M,
Mizubayashi T, Mukai Y, Nagasaki H, Nagata Y,
Naito S, Nakashima M, Nakama Y, Nakamichi Y,
Nakamura M, Meguro A, Negishi M, Ohta I, Ohta T,
Okamoto M, Ono N, Saji S, Sakaguchi M, Sakai K,
Shibata M, Shimokawa T, Song JY, Takazaki Y,
Terasawa K, Tsugane M, Tsuji K, Ueda S, Waki K,
Yamagata H, Yamamoto M, Yamamoto S, Yamane H,
Yoshiki S, Yoshihara R, Yukawa K, Zhong HS,
Yano M, Sasaki T, Yuan QP, Shu OT, Liu J,
Jones KM, Gansberger K, Moffat K, Hill J, Bera J,
Fadrosh D, Jin SH, Johri S, Kim M, Overton L,
Reardon M, Tsitrin T, Vuong H, Weaver B, Ciecko A,
Tallon L, Jackson J, Pai G, Van Aken S, Utterback T,
Reidmuller S, Feldblyum T, Hsiao J, Zismann V,
Iobst S, de Vazeille AR, Buell CR, Ying K, Li Y,
Lu TT, Huang YC, Zhao Q, Feng Q, Zhang L, Zhu JJ,
Weng QJ, Mu J, Lu YQ, Fan DL, Liu YL, Guan JP,
Zhang YJ, Yu SL, Liu XH, Zhang Y, Hong GF,
Han B, Choisne N, Demange N, Orjeda G, Samain S,
Cattolico L, Pelletier E, Couloux A, Segurens B,
Wincker P, D’Hont A, Scarpelli C, Weissenbach J,
Salanoubat M, Quetier F, Yu Y, Kim HR, Rambo T,
Currie J, Collura K, Luo MZ, Yang TJ, Ammiraju JSS,
Engler F, Soderlund C, Wing RA, Palmer LE, de la
Bastide M, Spiegel L, Nascimento L, Zutavern T,
O’Shaughnessy A, Dike S, Dedhia N, Preston R,
Balija V, McCombie WR, Chow TY, Chen HH,
Chung MC, Chen CS, Shaw JF, Wu HP, Hsiao KJ,
Chao YT, Chu MK, Cheng CH, Hour AL, Lee PF,
Lin SJ, Lin YC, Liou JY, Liu SM, Hsing YI,
Raghuvanshi S, Mohanty A, Bharti AK, Gaur A,
Gupta V, Kumar D, Ravi V, Vij S, Kapur A,
Khurana P, Khurana P, Khurana JP, Tyagi AK,
Gaikwad K, Singh A, Dalal V, Srivastava S, Dixit A,
Pal AK, Ghazi IA, Yadav M, Pandit A, Bhargava A,
Sureshbabu K, Batra K, Sharma TR, Mohapatra T,
Singh NK, Messing J, Nelson AB, Fuks G, Kavchok S,
Keizer G, Llaca ELV, Song RT, Tanyolac B,
Young S, Il KH, Hahn JH, Sangsakoo G, Vanavichit A, de Mattos LAT, Zimmer PD, Malone G,
Dellagostin O, de Oliveira AC, Bevan M, Bancroft I,
Minx P, Cordum H, Wilson R, Cheng ZK, Jin WW,
Jiang JM, Leong SA, Iwama H, Gojobori T, Itoh T,
Niimura Y, Fujii Y, Habara T, Sakai H, Sato Y,
Wilson G, Kumar K, McCouch S, Juretic N, Hoen D,
Wright S, Bruskiewich R, Bureau T, Miyao A,
Hirochika H, Nishikawa T, Kadowaki K, Sugiura M
(2005) Project IRGS. The map-based sequence of the
rice genome. Nature 436(7052):793–800
Melters DP, Bradnam KR, Young HA, Telis N, May MR,
Ruby JG, Sebra R, Peluso P, Eid J, Rank D, Garcia JF,
De Risi JL, Smith T, Tobias C, Ross-Ibarra J, Korf I,
Chan SW (2013) Comparative analysis of tandem
repeats from hundreds of species reveals unique
insights into centromere evolution. Genome Biol 14
(1):R10
Michael TP, Bryant D, Gutierrez R, Borisjuk N, Chu P,
Zhang HZ, Xia J, Zhou JF, Peng H, El Baidouri M, ten
Hallers B, Hastie AR, Liang T, Acosta K, Gilbert S,
McEntee C, Jackson SA, Mockler TC, Zhang WX,
Lam E (2017) Comprehensive definition of genome
features in Spirodela polyrhiza by high-depth physical
mapping and short-read DNA sequencing strategies.
Plant J 89(3):617–635
Miretzky P, Saralegui A, Cirelli AF (2004) Aquatic
macrophytes potential for the simultaneous removal of
heavy metals (Buenos Aires, Argentina). Chemosphere 57(8):997–1005
Naumann B, Eberius M, Appenroth KJ (2007) Growth
rate based dose-response relationships and EC-values
7 The Journey of Spirodela Whole-Genome Sequencing
83
Alberti A, Bernard M, Correa M, Ayyampalayam S,
Mckain MR, Leebens-Mack J, Burgess D, Freeling M,
Mbeguie-A-Mbeguie D, Chabannes M, Wicker T,
Panaud O, Barbosa J, Hribova E, Heslop-Harrison P,
Habas R, Rivallan R, Francois P, Poiron C, Kilian A,
Burthia D, Jenny C, Bakry F, Brown S, Guignon V,
Kema G, Dita M, Waalwijk C, Joseph S, Dievart A,
Jaillon O, Leclercq J, Argout X, Lyons E, Almeida A,
Jeridi M, Dolezel J, Roux N, Risterucci AM, Weissenbach J, Ruiz M, Glaszmann JC, Quetier F,
Yahiaoui N, Wincker P (2012) The banana (Musa
acuminata) genome and the evolution of monocotyledonous plants. Nature 488(7410):213–217
De Leede LG, Humphries JE, Bechet AC, Van Hoogdalem EJ, Verrijk R, Spencer DG (2008) Novel
controlled-release Lemna-derived IFN-alpha2b (Locteron): pharmacokinetics, pharmacodynamics, and
tolerability in a phase I clinical trial. J Interferon
Cytokine Res 28(2):113–122
Lamesch P, Berardini TZ, Li DH, Swarbreck D, Wilks C,
Sasidharan R, Muller R, Dreher K, Alexander DL,
Garcia-Hernandez M, Karthikeyan AS, Lee CH, Nelson WD, Ploetz L, Singh S, Wensel A, Huala E (2012)
The arabidopsis information resource (TAIR):
improved gene annotation and new tools. Nucleic
Acids Res 40(D1):D1202–D1210
Li J, Jain M, Vunsh R, Vishnevetsky J, Hanania U,
Flaishman M, Perl A, Edelman M (2004) Callus
induction and regeneration in Spirodela and Lemna.
Plant Cell Rep 22(7):457–464
Ma YB, Zhu M, Yu CJ, Wang Y, Liu Y, Li ML, Sun YD,
Zhao JS, Zhou GK (2018) Large-scale screening and
characterisation of Lemna aequinoctialis and Spirodela polyrhiza strains for starch production. Plant Biol
(Stuttg) 20(2):357–364
Matsumoto T, Wu JZ, Kanamori H, Katayose Y, Fujisawa M, Namiki N, Mizuno H, Yamamoto K, Antonio BA, Baba T, Sakata K, Nagamura Y, Aoki H,
Arikawa K, Arita K, Bito T, Chiden Y, Fujitsuka N,
Fukunaka R, Hamada M, Harada C, Hayashi A,
Hijishita S, Honda M, Hosokawa S, Ichikawa Y,
Idonuma A, Iijima M, Ikeda M, Ikeno M, Ito K, Ito S,
Ito T, Ito Y, Ito Y, Iwabuchi A, Kamiya K, Karasawa W, Kurita K, Katagiri S, Kikuta A, Kobayashi H,
Kobayashi N, Machita K, Maehara T, Masukawa M,
Mizubayashi T, Mukai Y, Nagasaki H, Nagata Y,
Naito S, Nakashima M, Nakama Y, Nakamichi Y,
Nakamura M, Meguro A, Negishi M, Ohta I, Ohta T,
Okamoto M, Ono N, Saji S, Sakaguchi M, Sakai K,
Shibata M, Shimokawa T, Song JY, Takazaki Y,
Terasawa K, Tsugane M, Tsuji K, Ueda S, Waki K,
Yamagata H, Yamamoto M, Yamamoto S, Yamane H,
Yoshiki S, Yoshihara R, Yukawa K, Zhong HS,
Yano M, Sasaki T, Yuan QP, Shu OT, Liu J,
Jones KM, Gansberger K, Moffat K, Hill J, Bera J,
Fadrosh D, Jin SH, Johri S, Kim M, Overton L,
Reardon M, Tsitrin T, Vuong H, Weaver B, Ciecko A,
Tallon L, Jackson J, Pai G, Van Aken S, Utterback T,
Reidmuller S, Feldblyum T, Hsiao J, Zismann V,
Iobst S, de Vazeille AR, Buell CR, Ying K, Li Y,
Lu TT, Huang YC, Zhao Q, Feng Q, Zhang L, Zhu JJ,
Weng QJ, Mu J, Lu YQ, Fan DL, Liu YL, Guan JP,
Zhang YJ, Yu SL, Liu XH, Zhang Y, Hong GF,
Han B, Choisne N, Demange N, Orjeda G, Samain S,
Cattolico L, Pelletier E, Couloux A, Segurens B,
Wincker P, D’Hont A, Scarpelli C, Weissenbach J,
Salanoubat M, Quetier F, Yu Y, Kim HR, Rambo T,
Currie J, Collura K, Luo MZ, Yang TJ, Ammiraju JSS,
Engler F, Soderlund C, Wing RA, Palmer LE, de la
Bastide M, Spiegel L, Nascimento L, Zutavern T,
O’Shaughnessy A, Dike S, Dedhia N, Preston R,
Balija V, McCombie WR, Chow TY, Chen HH,
Chung MC, Chen CS, Shaw JF, Wu HP, Hsiao KJ,
Chao YT, Chu MK, Cheng CH, Hour AL, Lee PF,
Lin SJ, Lin YC, Liou JY, Liu SM, Hsing YI,
Raghuvanshi S, Mohanty A, Bharti AK, Gaur A,
Gupta V, Kumar D, Ravi V, Vij S, Kapur A,
Khurana P, Khurana P, Khurana JP, Tyagi AK,
Gaikwad K, Singh A, Dalal V, Srivastava S, Dixit A,
Pal AK, Ghazi IA, Yadav M, Pandit A, Bhargava A,
Sureshbabu K, Batra K, Sharma TR, Mohapatra T,
Singh NK, Messing J, Nelson AB, Fuks G, Kavchok S,
Keizer G, Llaca ELV, Song RT, Tanyolac B,
Young S, Il KH, Hahn JH, Sangsakoo G, Vanavichit A, de Mattos LAT, Zimmer PD, Malone G,
Dellagostin O, de Oliveira AC, Bevan M, Bancroft I,
Minx P, Cordum H, Wilson R, Cheng ZK, Jin WW,
Jiang JM, Leong SA, Iwama H, Gojobori T, Itoh T,
Niimura Y, Fujii Y, Habara T, Sakai H, Sato Y,
Wilson G, Kumar K, McCouch S, Juretic N, Hoen D,
Wright S, Bruskiewich R, Bureau T, Miyao A,
Hirochika H, Nishikawa T, Kadowaki K, Sugiura M
(2005) Project IRGS. The map-based sequence of the
rice genome. Nature 436(7052):793–800
Melters DP, Bradnam KR, Young HA, Telis N, May MR,
Ruby JG, Sebra R, Peluso P, Eid J, Rank D, Garcia JF,
De Risi JL, Smith T, Tobias C, Ross-Ibarra J, Korf I,
Chan SW (2013) Comparative analysis of tandem
repeats from hundreds of species reveals unique
insights into centromere evolution. Genome Biol 14
(1):R10
Michael TP, Bryant D, Gutierrez R, Borisjuk N, Chu P,
Zhang HZ, Xia J, Zhou JF, Peng H, El Baidouri M, ten
Hallers B, Hastie AR, Liang T, Acosta K, Gilbert S,
McEntee C, Jackson SA, Mockler TC, Zhang WX,
Lam E (2017) Comprehensive definition of genome
features in Spirodela polyrhiza by high-depth physical
mapping and short-read DNA sequencing strategies.
Plant J 89(3):617–635
Miretzky P, Saralegui A, Cirelli AF (2004) Aquatic
macrophytes potential for the simultaneous removal of
heavy metals (Buenos Aires, Argentina). Chemosphere 57(8):997–1005
Naumann B, Eberius M, Appenroth KJ (2007) Growth
rate based dose-response relationships and EC-values
7 The Journey of Spirodela Whole-Genome Sequencing
83