Table 8.2
Software packages with tools for denoising (For more, see https://en.wikibooks.org/wiki/Software_Tools_For_Molecular_Microscopy)
Package
Algorithm(s)
Remarks
Coding environment
Web site
References
Bsoft
IMF
BLF
NAD
C++/TclTk
http://bsoft.ws
[12]
iMed
IMF
Integrated into
pyCoAn
FORTRAN/C/Python
http://coan.burnham.org
[52]
IMOD
NAD
FORTRAN/C
http://bio3d.colorado.edu/imod/
[27]
TomoAND
NAD
C++
http://sites.google.com/site/3demimageprocessing/tomoand
[59]
TomoBFlow
BF
C++
http://sites.google.com/site/3demimageprocessing/tomobflow
[57]
XMSF
MSF
Integrated into
Xmipp
C++
https://sites.google.com/site/xmsfilter/
[55]
BF
Beltrami
flow
BLF
Bilateral
filter
IMF
Iterative median
filter
NAD
Non-linear anisotropic
filter
MSF
Mean shift
filter
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