7 Tropical Endophytic Bacillus Species …
175
Castro RA, Quecine MC, Lacava PT et al (2014) Isolation and enzyme bioprospection of endophytic
bacteria associated with plants of Brazilian mangrove ecosystem. Springerplus 3:382. https://doi.
org/10.1186/2193-1801-3-382
Chandrashekhara SN, Deepak SA, Amruthesh KN, Shetty NP, Shetty HS (2007) Endophytic bacteria
from different plant origin enhance growth and induce downy mildew resistance in pearl millet.
Asian J Plant Pathol 1:1–11
Chaudhry V, Sharma S, Bansal K, Patil PB (2017) Glimpse into the genomes of rice endophytic
bacteria: diversity and distribution of firmicutes. Front Microbiol 7:2115. https://doi.org/10.3389/
fmicb.2016.02115
Chen L, Shi H, Heng J, Wang D, Bian K (2019) Antimicrobial, plant growth-promoting and genomic
properties of the peanut endophyte Bacillus velezensis LDO2. Microbiol Res 218:41–48. https://
doi.org/10.1016/j.micres.2018.10.002
Chen XH, Koumoutsi A, Scholz R et al (2007) Comparative analysis of the complete genome
sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42. Nat
Biotechnol 25:1007–10014. https://doi.org/10.1038/nbt1325
Compant S, Clément C, Sessitsch A (2010) Plant growth-promoting bacteria in the rhizo-and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization. Soil
Biol Biochem 42:669–678. https://doi.org/10.1016/j.soilbio.2009.11.024
Compant S, Reiter B, Sessitsch A, Nowak J, Clément C, Barka EA (2005) Endophytic colonization
of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. strain PsJN. Appl
Environ Microbiol 71:1685–1693. https://doi.org/10.1128/AEM.71.4.1685-1693.2005
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M (2005) Blast2GO: a universal
tool for annotation, visualization and analysis in functional genomics research. Bioinformatics
21:3674–3676. https://doi.org/10.1093/bioinformatics/bti610
Contreras-Pérez M, Hernández-Salmerón J, Rojas-Solís D et al (2019) Draft genome analysis of
the endophyte, Bacillus toyonensis COPE52, a blueberry (Vaccinium spp. var. Biloxi) growthpromoting bacterium. 3 Biotech 9:370. https://doi.org/10.1007/s13205-019-1911-5
de Sousa SM, de Oliveira CA, Andrade DL et al (2020) Tropical bacillus strains inoculation enhances
maize root surface area, dry weight, nutrient uptake and grain yield. J Plant Growth Regul. https://
doi.org/10.1007/s00344-020-10146-9
Deivanai S, Bindusara AS, Prabhakaran G, Bhore SJ (2014) Culturable bacterial endophytes isolated
from Mangrove tree (Rhizophora apiculata Blume) enhance seedling growth in rice. J Nat Sc
Biol Med 5:437. https://doi.org/10.4103/0976-9668.136233
Doty SL, Sher AW, Fleck ND et al (2016) Variable nitrogen fixation in wild Populus. PLoS ONE
11:e0155979. https://doi.org/10.1371/journal.pone.0155979
Edwards J, Johnson C, Santos-Medellín C et al (2015) Structure, variation, and assembly of the
root associated microbiome of rice. Proc Natl Acad Sci USA 112:E911–E920. https://doi.org/10.
1073/pnas.1414592112
FAO (2019) FAOSTAT statistical database. Food and Agriculture Organization of the United
Nations, Rome, Italy. Available in http://www.fao.org/faostat/home. Accessed 20 Jul 2019
Farrar K, Bryant D, Cope-Selby N (2014) Understanding and engineering beneficial plant-microbe
interactions: plant growth promotion in energy crops. Plant Biotechnol J 12:1193–1206. https://
doi.org/10.1111/pbi.12279
Ferreira A, Quecine MC, Lacava PT, Oda S, Azevedo JL, Araújo WL (2008) Diversity of endophytic
bacteria from Eucalyptus species seeds and colonization of seedlings by Pantoea agglomerans.
FEMS Microbiol Lett 287:8–14. https://doi.org/10.1111/j.1574-6968.2008.01258.x
Franche C, Lindström K, Elmerich C (2009) Nitrogen-fixing bacteria associated with leguminous
and non-leguminous plants. Plant Soil 321:35–59. https://doi.org/10.1007/s11104-008-9833-8
Gaiero JR, Mc Call CA, Thompson KA, Day NJ, Best AS, Dunfield KE (2013) Inside the root
microbiome: bacterial root endophytes and plant growth promotion. Am J Bot 100:1738–1750.
https://doi.org/10.3732/ajb.1200572
175
Castro RA, Quecine MC, Lacava PT et al (2014) Isolation and enzyme bioprospection of endophytic
bacteria associated with plants of Brazilian mangrove ecosystem. Springerplus 3:382. https://doi.
org/10.1186/2193-1801-3-382
Chandrashekhara SN, Deepak SA, Amruthesh KN, Shetty NP, Shetty HS (2007) Endophytic bacteria
from different plant origin enhance growth and induce downy mildew resistance in pearl millet.
Asian J Plant Pathol 1:1–11
Chaudhry V, Sharma S, Bansal K, Patil PB (2017) Glimpse into the genomes of rice endophytic
bacteria: diversity and distribution of firmicutes. Front Microbiol 7:2115. https://doi.org/10.3389/
fmicb.2016.02115
Chen L, Shi H, Heng J, Wang D, Bian K (2019) Antimicrobial, plant growth-promoting and genomic
properties of the peanut endophyte Bacillus velezensis LDO2. Microbiol Res 218:41–48. https://
doi.org/10.1016/j.micres.2018.10.002
Chen XH, Koumoutsi A, Scholz R et al (2007) Comparative analysis of the complete genome
sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42. Nat
Biotechnol 25:1007–10014. https://doi.org/10.1038/nbt1325
Compant S, Clément C, Sessitsch A (2010) Plant growth-promoting bacteria in the rhizo-and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization. Soil
Biol Biochem 42:669–678. https://doi.org/10.1016/j.soilbio.2009.11.024
Compant S, Reiter B, Sessitsch A, Nowak J, Clément C, Barka EA (2005) Endophytic colonization
of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. strain PsJN. Appl
Environ Microbiol 71:1685–1693. https://doi.org/10.1128/AEM.71.4.1685-1693.2005
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M (2005) Blast2GO: a universal
tool for annotation, visualization and analysis in functional genomics research. Bioinformatics
21:3674–3676. https://doi.org/10.1093/bioinformatics/bti610
Contreras-Pérez M, Hernández-Salmerón J, Rojas-Solís D et al (2019) Draft genome analysis of
the endophyte, Bacillus toyonensis COPE52, a blueberry (Vaccinium spp. var. Biloxi) growthpromoting bacterium. 3 Biotech 9:370. https://doi.org/10.1007/s13205-019-1911-5
de Sousa SM, de Oliveira CA, Andrade DL et al (2020) Tropical bacillus strains inoculation enhances
maize root surface area, dry weight, nutrient uptake and grain yield. J Plant Growth Regul. https://
doi.org/10.1007/s00344-020-10146-9
Deivanai S, Bindusara AS, Prabhakaran G, Bhore SJ (2014) Culturable bacterial endophytes isolated
from Mangrove tree (Rhizophora apiculata Blume) enhance seedling growth in rice. J Nat Sc
Biol Med 5:437. https://doi.org/10.4103/0976-9668.136233
Doty SL, Sher AW, Fleck ND et al (2016) Variable nitrogen fixation in wild Populus. PLoS ONE
11:e0155979. https://doi.org/10.1371/journal.pone.0155979
Edwards J, Johnson C, Santos-Medellín C et al (2015) Structure, variation, and assembly of the
root associated microbiome of rice. Proc Natl Acad Sci USA 112:E911–E920. https://doi.org/10.
1073/pnas.1414592112
FAO (2019) FAOSTAT statistical database. Food and Agriculture Organization of the United
Nations, Rome, Italy. Available in http://www.fao.org/faostat/home. Accessed 20 Jul 2019
Farrar K, Bryant D, Cope-Selby N (2014) Understanding and engineering beneficial plant-microbe
interactions: plant growth promotion in energy crops. Plant Biotechnol J 12:1193–1206. https://
doi.org/10.1111/pbi.12279
Ferreira A, Quecine MC, Lacava PT, Oda S, Azevedo JL, Araújo WL (2008) Diversity of endophytic
bacteria from Eucalyptus species seeds and colonization of seedlings by Pantoea agglomerans.
FEMS Microbiol Lett 287:8–14. https://doi.org/10.1111/j.1574-6968.2008.01258.x
Franche C, Lindström K, Elmerich C (2009) Nitrogen-fixing bacteria associated with leguminous
and non-leguminous plants. Plant Soil 321:35–59. https://doi.org/10.1007/s11104-008-9833-8
Gaiero JR, Mc Call CA, Thompson KA, Day NJ, Best AS, Dunfield KE (2013) Inside the root
microbiome: bacterial root endophytes and plant growth promotion. Am J Bot 100:1738–1750.
https://doi.org/10.3732/ajb.1200572