176
C. C. V. Velloso et al.
Garland G, Bünemann EK, Oberson A, Frossard E, Snapp S, Chikowo R, Six J (2018) Phosphorus
cycling within soil aggregate fractions of a highly weathered tropical soil: a conceptual model.
Soil Biol Biochem 116:91–98. https://doi.org/10.1016/j.soilbio.2017.10.007
Ghyselinck J, Velivelli SLS, Heylen K et al (2013) Bioprospecting in potato fields in the Central
Andean Highlands: screening of rhizobacteria for plant growth-promoting properties. Syst Appl
Microbiol 36:116–127. https://doi.org/10.1016/j.syapm.2012.11.007
Gold SE, Blacutt AA, Meinersmann RJ, Bacon CW (2014) Whole-genome shotgun sequence of
Bacillus mojavensis strain RRC101, an endophytic bacterium antagonistic to the mycotoxigenic
endophytic fungus Fusarium verticillioides. Genome Announc 2:e01090–14. https://doi.org/10.
1128/genomeA.01090-14
Gomes EA, Lana UGP, Quensen JF et al (2018) Root-associated microbiome of maize genotypes
with contrasting phosphorus use efficiency. Phytobiomes J 2:129–137. https://doi.org/10.1094/
PBIOMES-03-18-0012-R
Gond SK, Bergena MS, Torres MS, White JF Jr (2015) Endophytic Bacillus spp. produce antifungal
lipopeptides and inducehost defence gene expression in maize. Microbiol Res 172:79–87. https://
doi.org/10.1016/j.micres.2014.11.004
Hallmann J, Quadt-Hallmann A, Mahaffee WF, Kloepper JW (1997) Bacterial endophytes in
agricultural crops. Can J Microbiol 43:895–914. https://doi.org/10.1139/m97-131
Hallmann J (2001) Plant Interactions with Endophytic Bacteria (ed) CABI Publishing, New York,
pp 87–119
Hardoim PR, van Overbeek LS, van Elsas JD (2008) Properties of bacterial endophytes and their
proposed role in plant growth. Trends Microbiol 16:463–471. https://doi.org/10.1016/j.tim.2008.
07.008
Haruna E, Zin NM, Kerfahi D, Adams JM (2017) Extensive overlap of tropical rainforest bacterial
endophytes between soil, plant parts, and plant species. Microb Ecol 75:88–103. https://doi.org/
10.1007/s00248-017-1002-2
Haygarth PM, Jarvie HP, Powers SM et al (2014) Sustainable phosphorus management and the need
for a long-term perspective: the legacy hypothesis. Environ Sci Technol 48:8417–8419. https://
doi.org/10.1021/es502852s
Hirel B, Lea PJ (2018) Genomics of nitrogen use efficiency in maize: From basic approaches to
agronomic applications. In: Bennetzen J, Flint-Garcia S, Hirsch C, Tuberosa R (eds) The Maize
Genome, Springer, Cham, pp 259–286. https://doi.org/10.1007/978-3-319-97427-9_16
Hori K, Matsumoto S (2010) Bacterial adhesion: from mechanism to control. Biochem Eng J
48:424–434. https://doi.org/10.1016/j.bej.2009.11.014
Imam J, Singh PK, Shukla P (2016) Plant microbe interactions in post genomic era: perspectives
and applications. Front Microbiol 7:1488. https://doi.org/10.3389/fmicb.2016.01488
Jeong H, Choi SK, Kloepper JW, Ryu CM (2014) Genome sequence of the plant endophyte Bacillus
pumilus INR7, triggering induced systemic resistance in field crops. Genome Announc 2:e01093–
14. https://doi.org/10.1128/genomeA.01093-14
Kalpage FSCP (1974) Tropical soils: classification, fertility and management. The Macmillan
Company of India Limited, pp 306
Kanehisa M, Furumichi M, Tanabe M, Sato Y, Morishima K (2016) KEGG: new perspectives on
genomes, pathways, diseases and drugs. Nucleic Acids Res 45:D353–D361. https://doi.org/10.
1093/nar/gkw1092
Kobayashi DY, Palumbo JD (2000) Bacterial endophytes and their effects on plants and uses in
agriculture. Marcel Dekker, New York, pp 199–236
Kong WJ, Yan YC, Li XY, Liu ZY (2018) Draft Genome Sequence of Bacillus velezensis PEBA20, a
strain with a plant growth-promoting effect and biocontrol potential. Genome Announc 6:e00286–
18. https://doi.org/10.1128/genomeA.00286-18
Koskinen P, Törönen P, Nokso-Koivisto J, Holm L (2015) PANNZER: high-throughput functional
annotation of uncharacterized proteins in an error-prone environment. Bioinformatics 31:1544–
1552. https://doi.org/10.1093/bioinformatics/btu851
C. C. V. Velloso et al.
Garland G, Bünemann EK, Oberson A, Frossard E, Snapp S, Chikowo R, Six J (2018) Phosphorus
cycling within soil aggregate fractions of a highly weathered tropical soil: a conceptual model.
Soil Biol Biochem 116:91–98. https://doi.org/10.1016/j.soilbio.2017.10.007
Ghyselinck J, Velivelli SLS, Heylen K et al (2013) Bioprospecting in potato fields in the Central
Andean Highlands: screening of rhizobacteria for plant growth-promoting properties. Syst Appl
Microbiol 36:116–127. https://doi.org/10.1016/j.syapm.2012.11.007
Gold SE, Blacutt AA, Meinersmann RJ, Bacon CW (2014) Whole-genome shotgun sequence of
Bacillus mojavensis strain RRC101, an endophytic bacterium antagonistic to the mycotoxigenic
endophytic fungus Fusarium verticillioides. Genome Announc 2:e01090–14. https://doi.org/10.
1128/genomeA.01090-14
Gomes EA, Lana UGP, Quensen JF et al (2018) Root-associated microbiome of maize genotypes
with contrasting phosphorus use efficiency. Phytobiomes J 2:129–137. https://doi.org/10.1094/
PBIOMES-03-18-0012-R
Gond SK, Bergena MS, Torres MS, White JF Jr (2015) Endophytic Bacillus spp. produce antifungal
lipopeptides and inducehost defence gene expression in maize. Microbiol Res 172:79–87. https://
doi.org/10.1016/j.micres.2014.11.004
Hallmann J, Quadt-Hallmann A, Mahaffee WF, Kloepper JW (1997) Bacterial endophytes in
agricultural crops. Can J Microbiol 43:895–914. https://doi.org/10.1139/m97-131
Hallmann J (2001) Plant Interactions with Endophytic Bacteria (ed) CABI Publishing, New York,
pp 87–119
Hardoim PR, van Overbeek LS, van Elsas JD (2008) Properties of bacterial endophytes and their
proposed role in plant growth. Trends Microbiol 16:463–471. https://doi.org/10.1016/j.tim.2008.
07.008
Haruna E, Zin NM, Kerfahi D, Adams JM (2017) Extensive overlap of tropical rainforest bacterial
endophytes between soil, plant parts, and plant species. Microb Ecol 75:88–103. https://doi.org/
10.1007/s00248-017-1002-2
Haygarth PM, Jarvie HP, Powers SM et al (2014) Sustainable phosphorus management and the need
for a long-term perspective: the legacy hypothesis. Environ Sci Technol 48:8417–8419. https://
doi.org/10.1021/es502852s
Hirel B, Lea PJ (2018) Genomics of nitrogen use efficiency in maize: From basic approaches to
agronomic applications. In: Bennetzen J, Flint-Garcia S, Hirsch C, Tuberosa R (eds) The Maize
Genome, Springer, Cham, pp 259–286. https://doi.org/10.1007/978-3-319-97427-9_16
Hori K, Matsumoto S (2010) Bacterial adhesion: from mechanism to control. Biochem Eng J
48:424–434. https://doi.org/10.1016/j.bej.2009.11.014
Imam J, Singh PK, Shukla P (2016) Plant microbe interactions in post genomic era: perspectives
and applications. Front Microbiol 7:1488. https://doi.org/10.3389/fmicb.2016.01488
Jeong H, Choi SK, Kloepper JW, Ryu CM (2014) Genome sequence of the plant endophyte Bacillus
pumilus INR7, triggering induced systemic resistance in field crops. Genome Announc 2:e01093–
14. https://doi.org/10.1128/genomeA.01093-14
Kalpage FSCP (1974) Tropical soils: classification, fertility and management. The Macmillan
Company of India Limited, pp 306
Kanehisa M, Furumichi M, Tanabe M, Sato Y, Morishima K (2016) KEGG: new perspectives on
genomes, pathways, diseases and drugs. Nucleic Acids Res 45:D353–D361. https://doi.org/10.
1093/nar/gkw1092
Kobayashi DY, Palumbo JD (2000) Bacterial endophytes and their effects on plants and uses in
agriculture. Marcel Dekker, New York, pp 199–236
Kong WJ, Yan YC, Li XY, Liu ZY (2018) Draft Genome Sequence of Bacillus velezensis PEBA20, a
strain with a plant growth-promoting effect and biocontrol potential. Genome Announc 6:e00286–
18. https://doi.org/10.1128/genomeA.00286-18
Koskinen P, Törönen P, Nokso-Koivisto J, Holm L (2015) PANNZER: high-throughput functional
annotation of uncharacterized proteins in an error-prone environment. Bioinformatics 31:1544–
1552. https://doi.org/10.1093/bioinformatics/btu851