122
Xenopus
Papalopulu, N., Kintner, C., 1996. A posteriorising factor, retinoic
acid, reveals that anteroposterior patterning controls the timing of neuronal differentiation in Xenopus neuroectoderm.
Development 122, 3409–3418.
Parlier, D., Moers, V., Van Campenhout, C., Preillon, J., Leclère, L.,
Saulnier, A., Sirakov, M., Busengdal, H., Kricha, S., Marine,
J.-C., Rentzsch, F., Bellefroid, E.J., 2013. The Xenopus doublesex-related gene Dmrt5 is required for olfactory placode
neurogenesis. Dev. Biol. 373, 39–52. https://doi.org/10.1016/J.
YDBIO.2012.10.003
Pegoraro, C., Monsoro-Burq, A.H., 2013. Signaling and transcriptional regulation in neural crest specifcation and migration:
Lessons from Xenopus embryos. WIREs Dev. Biol. 2, 247–
259. https://doi.org/10.1002/wdev.76
Peres, J.N., Durston, A.J., 2006. Role of X-Delta-2 in the early neural development of Xenopus laevis. Dev. Dyn. 235, 802–810.
https://doi.org/10.1002/dvdy.20677
Peres, J.N., McNulty, C.L., Durston, A.J., 2006. Interaction
between X-Delta-2 and Hox genes regulates segmentation
and patterning of the anteroposterior axis. Mech. Dev. 123,
321–333. https://doi.org/10.1016/j.mod.2006.03.001
Perron, M., Opdecamp, K., Butler, K., Harris, W.A., Bellefroid,
E.J., 1999. X-ngnr-1 and Xath3 promote ectopic expression
of sensory neuron markers in the neurula ectoderm and have
distinct inducing properties in the retina. Proc. Natl. Acad.
Sci. U. S. A. 96, 14996–15001. https://doi.org/10.1073/
PNAS.96.26.14996
Peyrot, S.M., Wallingford, J.B., Harland, R.M., 2011. A revised
model of Xenopus dorsal midline development: Differential
and separable requirements for Notch and Shh signaling.
Dev. Biol. 352, 254–266. https://doi.org/10.1016/j.ydbio.
2011.01.021
Pichon, B., Taelman, V., Bellefroid, E.J., Christophe, D., 2004.
Transcriptional repression by the bHLH-Orange factor XHRT1 does not involve the C-terminal YRPW motif.
Biochim. Biophys. Acta-Gene Struct. Expr. 1680, 46–52.
https://doi.org/10.1016/j.bbaexp.2004.08.010
Pichon, B., Taelman, V., Kricha, S., Christophe, D., Bellefroid, E.J.,
2002. XHRT-1, a hairy and enhancer of split related gene
with expression in foor plate and hypochord during early
Xenopus embryogenesis. Dev. Genes Evol. 212, 491–495.
https://doi.org/10.1007/s00427-002-0270-z
Pla, P., Monsoro-Burq, A.H., 2018. The neural border: Induction,
specifcation and maturation of the territory that generates
neural crest cells. Dev. Biol. 444, S36–S46. https://doi.
org/10.1016/j.ydbio.2018.05.018
Pollet, N., Muncke, N., Verbeek, B., Li, Y., Fenger, U., Delius, H.,
Niehrs, C., 2005. An atlas of differential gene expression
during early Xenopus embryogenesis. Mech. Dev. 122, 365–
439. https://doi.org/10.1016/j.mod.2004.11.009
Poulson, D.F., 1937. Chromosomal defciencies and the embryonic
development of Drosophila melanogaster. Proc. Natl. Acad.
Sci. U. S. A. 23, 133–137.
Pourquié, O., Tam, P.P.L., 2001. A nomenclature for prospective somites and phases of cyclic gene expression in the
presomitic mesoderm. Dev. Cell 1, 619–620. https://doi.
org/10.1016/s1534-5807(01)00082-x
Revinski, D.R., Paganelli, A.R., Carrasco, A.E., López, S.L., 2010.
Delta-Notch signaling is involved in the segregation of the
three germ layers in Xenopus laevis. Dev. Biol. 339, 477–492.
https://doi.org/10.1016/j.ydbio.2010.01.010
Riddiford, N., Schlosser, G., 2016. Dissecting the pre-placodal
transcriptome to reveal presumptive direct targets of Six1
and Eya1 in cranial placodes. Elife 5. https://doi.org/10.7554/
eLife.17666
Riddiford, N., Schlosser, G., 2017. Six1 and Eya1 both promote
and arrest neuronal differentiation by activating multiple
Notch pathway genes. Dev. Biol. 431, 152–167. https://doi.
org/10.1016/J.YDBIO.2017.09.027
Roberts, A., 1989. The neurons that control axial movements in a
frog embryo. Am. Zool. 29, 53–63. https://doi.org/10.1093/
icb/29.1.53
Rones, M.S., Woda, J., Mercola, M., McLaughlin, K.A., 2002.
Isolation and characterization of Xenopus Hey-1: A downstream mediator of notch signaling. Dev. Dyn. 225, 554–560.
https://doi.org/10.1002/dvdy.10192
Saint-Jeannet, J.-P., Moody, S.A., 2014. Establishing the preplacodal region and breaking it into placodes with distinct
identities. Dev. Biol. 389, 13–27. https://doi.org/10.1016/j.
ydbio.2014.02.011
Sakano, D., Kato, A., Parikh, N., McKnight, K., Terry, D.,
Stefanovic, B., Kato, Y., 2010. BCL6 canalizes Notchdependent transcription, excluding Mastermind-like1 from
selected target genes during left-right patterning. Dev.
Cell 18, 450–462. https://doi.org/10.1016/j.devcel.2009.
12.023
Sanalkumar, R., Dhanesh, S.B., James, J., 2010. Non-canonical
activation of Notch signaling/target genes in vertebrates.
Cell. Mol. Life Sci. 67, 2957–2968. https://doi.org/10.1007/
s00018-010-0391-x
Sanders, P.G.T., Muñoz-Descalzo, S., Balayo, T., Wirtz-Peitz, F.,
Hayward, P., Martinez Arias, A., 2009. Ligand-independent
traffc of Notch buffers activated Armadillo in Drosophila.
PLoS Biol. 7, e1000169. https://doi.org/10.1371/journal.
pbio.1000169
Sasaki, N., Kiso, M., Kitagawa, M., Saga, Y., 2011. The repression of Notch signaling occurs via the destabilization of
mastermind-like 1 by Mesp2 and is essential for somitogenesis. Development 138, 55–64. https://doi.org/10.1242/
dev.055533
Schlosser, G., Awtry, T., Brugmann, S.A., Jensen, E.D., Neilson,
K., Ruan, G., Stammler, A., Voelker, D., Yan, B., Zhang,
C., Klymkowsky, M.W., Moody, S.A., 2008. Eya1 and Six1
promote neurogenesis in the cranial placodes in a SoxB1dependent fashion. Dev. Biol. 320, 199–214. https://doi.
org/10.1016/J.YDBIO.2008.05.523
Schneider, M.L., Turner, D.L., Vetter, M.L., 2001. Notch signaling can inhibit Xath5 function in the neural plate and developing retina. Mol. Cell. Neurosci. 18, 458–472. https://doi.
org/10.1006/mcne.2001.1040
Seo, S., Lim, J.-W., Yellajoshyula, D., Chang, L.-W., Kroll, K.L.,
2007. Neurogenin and NeuroD direct transcriptional targets
and their regulatory enhancers. EMBO J. 26, 5093–5108.
https://doi.org/10.1038/sj.emboj.7601923
Session, A.M., Uno, Y., Kwon, T., Chapman, J.A., Toyoda, A.,
Takahashi, S., Fukui, A., Hikosaka, A., Suzuki, A., Kondo, M.,
van Heeringen, S.J., Quigley, I., Heinz, S., Ogino, H., Ochi, H.,
Hellsten, U., Lyons, J.B., Simakov, O., Putnam, N., Stites, J.,
Kuroki, Y., Tanaka, T., Michiue, T., Watanabe, M., Bogdanovic,
O., Lister, R., Georgiou, G., Paranjpe, S.S., van Kruijsbergen,
I., Shu, S., Carlson, J., Kinoshita, T., Ohta, Y., Mawaribuchi,
S., Jenkins, J., Grimwood, J., Schmutz, J., Mitros, T.,
Mozaffari, S. V., Suzuki, Y., Haramoto, Y., Yamamoto, T.S.,
Takagi, C., Heald, R., Miller, K., Haudenschild, C., Kitzman,
J., Nakayama, T., Izutsu, Y., Robert, J., Fortriede, J., Burns, K.,
Lotay, V., Karimi, K., Yasuoka, Y., Dichmann, D.S., Flajnik,
M.F., Houston, D.W., Shendure, J., DuPasquier, L., Vize, P.D.,
Zorn, A.M., Ito, M., Marcotte, E.M., Wallingford, J.B., Ito,
Y., Asashima, M., Ueno, N., Matsuda, Y., Veenstra, G.J.C.,
Fujiyama, A., Harland, R.M., Taira, M., Rokhsar, D.S., 2016.
Xenopus
Papalopulu, N., Kintner, C., 1996. A posteriorising factor, retinoic
acid, reveals that anteroposterior patterning controls the timing of neuronal differentiation in Xenopus neuroectoderm.
Development 122, 3409–3418.
Parlier, D., Moers, V., Van Campenhout, C., Preillon, J., Leclère, L.,
Saulnier, A., Sirakov, M., Busengdal, H., Kricha, S., Marine,
J.-C., Rentzsch, F., Bellefroid, E.J., 2013. The Xenopus doublesex-related gene Dmrt5 is required for olfactory placode
neurogenesis. Dev. Biol. 373, 39–52. https://doi.org/10.1016/J.
YDBIO.2012.10.003
Pegoraro, C., Monsoro-Burq, A.H., 2013. Signaling and transcriptional regulation in neural crest specifcation and migration:
Lessons from Xenopus embryos. WIREs Dev. Biol. 2, 247–
259. https://doi.org/10.1002/wdev.76
Peres, J.N., Durston, A.J., 2006. Role of X-Delta-2 in the early neural development of Xenopus laevis. Dev. Dyn. 235, 802–810.
https://doi.org/10.1002/dvdy.20677
Peres, J.N., McNulty, C.L., Durston, A.J., 2006. Interaction
between X-Delta-2 and Hox genes regulates segmentation
and patterning of the anteroposterior axis. Mech. Dev. 123,
321–333. https://doi.org/10.1016/j.mod.2006.03.001
Perron, M., Opdecamp, K., Butler, K., Harris, W.A., Bellefroid,
E.J., 1999. X-ngnr-1 and Xath3 promote ectopic expression
of sensory neuron markers in the neurula ectoderm and have
distinct inducing properties in the retina. Proc. Natl. Acad.
Sci. U. S. A. 96, 14996–15001. https://doi.org/10.1073/
PNAS.96.26.14996
Peyrot, S.M., Wallingford, J.B., Harland, R.M., 2011. A revised
model of Xenopus dorsal midline development: Differential
and separable requirements for Notch and Shh signaling.
Dev. Biol. 352, 254–266. https://doi.org/10.1016/j.ydbio.
2011.01.021
Pichon, B., Taelman, V., Bellefroid, E.J., Christophe, D., 2004.
Transcriptional repression by the bHLH-Orange factor XHRT1 does not involve the C-terminal YRPW motif.
Biochim. Biophys. Acta-Gene Struct. Expr. 1680, 46–52.
https://doi.org/10.1016/j.bbaexp.2004.08.010
Pichon, B., Taelman, V., Kricha, S., Christophe, D., Bellefroid, E.J.,
2002. XHRT-1, a hairy and enhancer of split related gene
with expression in foor plate and hypochord during early
Xenopus embryogenesis. Dev. Genes Evol. 212, 491–495.
https://doi.org/10.1007/s00427-002-0270-z
Pla, P., Monsoro-Burq, A.H., 2018. The neural border: Induction,
specifcation and maturation of the territory that generates
neural crest cells. Dev. Biol. 444, S36–S46. https://doi.
org/10.1016/j.ydbio.2018.05.018
Pollet, N., Muncke, N., Verbeek, B., Li, Y., Fenger, U., Delius, H.,
Niehrs, C., 2005. An atlas of differential gene expression
during early Xenopus embryogenesis. Mech. Dev. 122, 365–
439. https://doi.org/10.1016/j.mod.2004.11.009
Poulson, D.F., 1937. Chromosomal defciencies and the embryonic
development of Drosophila melanogaster. Proc. Natl. Acad.
Sci. U. S. A. 23, 133–137.
Pourquié, O., Tam, P.P.L., 2001. A nomenclature for prospective somites and phases of cyclic gene expression in the
presomitic mesoderm. Dev. Cell 1, 619–620. https://doi.
org/10.1016/s1534-5807(01)00082-x
Revinski, D.R., Paganelli, A.R., Carrasco, A.E., López, S.L., 2010.
Delta-Notch signaling is involved in the segregation of the
three germ layers in Xenopus laevis. Dev. Biol. 339, 477–492.
https://doi.org/10.1016/j.ydbio.2010.01.010
Riddiford, N., Schlosser, G., 2016. Dissecting the pre-placodal
transcriptome to reveal presumptive direct targets of Six1
and Eya1 in cranial placodes. Elife 5. https://doi.org/10.7554/
eLife.17666
Riddiford, N., Schlosser, G., 2017. Six1 and Eya1 both promote
and arrest neuronal differentiation by activating multiple
Notch pathway genes. Dev. Biol. 431, 152–167. https://doi.
org/10.1016/J.YDBIO.2017.09.027
Roberts, A., 1989. The neurons that control axial movements in a
frog embryo. Am. Zool. 29, 53–63. https://doi.org/10.1093/
icb/29.1.53
Rones, M.S., Woda, J., Mercola, M., McLaughlin, K.A., 2002.
Isolation and characterization of Xenopus Hey-1: A downstream mediator of notch signaling. Dev. Dyn. 225, 554–560.
https://doi.org/10.1002/dvdy.10192
Saint-Jeannet, J.-P., Moody, S.A., 2014. Establishing the preplacodal region and breaking it into placodes with distinct
identities. Dev. Biol. 389, 13–27. https://doi.org/10.1016/j.
ydbio.2014.02.011
Sakano, D., Kato, A., Parikh, N., McKnight, K., Terry, D.,
Stefanovic, B., Kato, Y., 2010. BCL6 canalizes Notchdependent transcription, excluding Mastermind-like1 from
selected target genes during left-right patterning. Dev.
Cell 18, 450–462. https://doi.org/10.1016/j.devcel.2009.
12.023
Sanalkumar, R., Dhanesh, S.B., James, J., 2010. Non-canonical
activation of Notch signaling/target genes in vertebrates.
Cell. Mol. Life Sci. 67, 2957–2968. https://doi.org/10.1007/
s00018-010-0391-x
Sanders, P.G.T., Muñoz-Descalzo, S., Balayo, T., Wirtz-Peitz, F.,
Hayward, P., Martinez Arias, A., 2009. Ligand-independent
traffc of Notch buffers activated Armadillo in Drosophila.
PLoS Biol. 7, e1000169. https://doi.org/10.1371/journal.
pbio.1000169
Sasaki, N., Kiso, M., Kitagawa, M., Saga, Y., 2011. The repression of Notch signaling occurs via the destabilization of
mastermind-like 1 by Mesp2 and is essential for somitogenesis. Development 138, 55–64. https://doi.org/10.1242/
dev.055533
Schlosser, G., Awtry, T., Brugmann, S.A., Jensen, E.D., Neilson,
K., Ruan, G., Stammler, A., Voelker, D., Yan, B., Zhang,
C., Klymkowsky, M.W., Moody, S.A., 2008. Eya1 and Six1
promote neurogenesis in the cranial placodes in a SoxB1dependent fashion. Dev. Biol. 320, 199–214. https://doi.
org/10.1016/J.YDBIO.2008.05.523
Schneider, M.L., Turner, D.L., Vetter, M.L., 2001. Notch signaling can inhibit Xath5 function in the neural plate and developing retina. Mol. Cell. Neurosci. 18, 458–472. https://doi.
org/10.1006/mcne.2001.1040
Seo, S., Lim, J.-W., Yellajoshyula, D., Chang, L.-W., Kroll, K.L.,
2007. Neurogenin and NeuroD direct transcriptional targets
and their regulatory enhancers. EMBO J. 26, 5093–5108.
https://doi.org/10.1038/sj.emboj.7601923
Session, A.M., Uno, Y., Kwon, T., Chapman, J.A., Toyoda, A.,
Takahashi, S., Fukui, A., Hikosaka, A., Suzuki, A., Kondo, M.,
van Heeringen, S.J., Quigley, I., Heinz, S., Ogino, H., Ochi, H.,
Hellsten, U., Lyons, J.B., Simakov, O., Putnam, N., Stites, J.,
Kuroki, Y., Tanaka, T., Michiue, T., Watanabe, M., Bogdanovic,
O., Lister, R., Georgiou, G., Paranjpe, S.S., van Kruijsbergen,
I., Shu, S., Carlson, J., Kinoshita, T., Ohta, Y., Mawaribuchi,
S., Jenkins, J., Grimwood, J., Schmutz, J., Mitros, T.,
Mozaffari, S. V., Suzuki, Y., Haramoto, Y., Yamamoto, T.S.,
Takagi, C., Heald, R., Miller, K., Haudenschild, C., Kitzman,
J., Nakayama, T., Izutsu, Y., Robert, J., Fortriede, J., Burns, K.,
Lotay, V., Karimi, K., Yasuoka, Y., Dichmann, D.S., Flajnik,
M.F., Houston, D.W., Shendure, J., DuPasquier, L., Vize, P.D.,
Zorn, A.M., Ito, M., Marcotte, E.M., Wallingford, J.B., Ito,
Y., Asashima, M., Ueno, N., Matsuda, Y., Veenstra, G.J.C.,
Fujiyama, A., Harland, R.M., Taira, M., Rokhsar, D.S., 2016.