6 Genomics of Marine Algae
209
Mock T, Samanta MP, Iverson V, Berthiaume C, Robison M, Holtermann K, Durkin C, Bondurant
SS, Richmond K, Rodesch M, Kallas T, Huttlin EL, Cerrina F, Sussman MR, Armbrust EV
(2008) Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana
identifies genes involved in silicon bioprocesses. Proc Natl Acad Sci U S A 105(5):1579–1584
Mock T, Thomas DN (2005) Recent advances in sea-ice microbiology. Environ Microbiol 7:
605–619
Moreira D, López-García P (2002) The molecular ecology of microbial eukaryotes unveils a hidden
world. Trends Microbiol 10:31–38
Morse D, Salois P, Markovic P, Hastings WJ (1995) A Nuclear-Encoded Form II RuBisCO in
Dinoflagellates. Science 268:1622–1624
Moulager M, Monnier A, Jesson B, Bouvet R, Mosser J, Schwartz C, Garnier L, Corellou F, Bouget
FY (2007) Light-dependent regulation of cell division in Ostreococcus: evidence for a major
transcriptional input. Plant Physiol 144:1360–1369
Muhlin JF, Engel CR, Stessel R, Weatherbee RA, Brawley SH (2008) The influence of coastal
topography, circulation patterns, and rafting in structuring populations of an intertidal alga.
Mol Ecol 17:1198–1210
Müller DG (1967) Generationswechsel, Kernphasenwechsel und Sexualität der Braunalge
Ectocarpus siliculosus im Kulturversuch. Planta 141:39–54
Nagasaki K (2008) Dinoflagellates, diatoms, and their viruses. J Microbiol 46:235–243
Nassoury N, Cappadocia M, Morse D (2003) Plastid ultrastructure defines the protein import
pathway in dinoflagellates. J Cell Sci 116:2867–2874
Nikaido I, Asamizu E, Nakajima M, Nakamura Y, Saga N, Tabata S (2000) Generation of 10,154
expressed sequence tags from a leafy gametophyte of a marine red alga, Porphyra yezoensis.
DNA Res 7:223–227
Nosenko T, Bhattacharya D (2007) Horizontal gene transfer in chromalveolates. BMC Evol Biol
7:173
Not F, Valentin K, Romari K, Lovejoy C, Massana R, Töbe K, Vaulot D, Medlin LK (2007)
Picobiliphytes: a marine picoplanktonic algal group with unknown affinities to other eukaryotes. Science 315:253–255
Nowack EC, Melkonian M, Glöckner G (2008) Chromatophore genome sequence of Paulinella
sheds light on acquisition of photosynthesis by eukaryotes. Curr Biol 18:410–418
Ohme M, Miura A (1988) Tetrad analysis in conchospore germlings of Porphyra yezoensis
(Rhodophyta, Bangiales). Plant Sci 57:135–140
Palenik B, Grimwood J, Aerts A, Rouzé P, Salamov A, Putnam N, Dupont C, Jorgensen R, Derelle
E, Rombauts S, Zhou K, Otillar R, Merchant SS, Podell S, Gaasterland T, Napoli C, Gendler
K, Manuell A, Tai V, Vallon O, Piganeau G, Jancek S, Heijde M, Jabbari K, Bowler C, Lohr
M, Robbens S, Werner G, Dubchak I, Pazour GJ, Ren Q, Paulsen I, Delwiche C, Schmutz J,
Rokhsar D, Van de Peer Y, Moreau H, Grigoriev IV (2007) The tiny eukaryote Ostreococcus
provides genomic insights into the paradox of plankton speciation. Proc Natl Acad Sci USA
104:7705–7710
Parfrey LW, Barbero E, Lasser E, Dunthorn M, Bhattacharya D, Patterson DJ, Katz LA (2006)
Evaluating support for the current classification of eukaryotic diversity. PLoS Genet 2:e220
Park E-J, Fukuda S, Endo H, Kitade Y,Saga N (2007) Genetic polymorphism within Porphyra
yezoensis (Bangiales, Rhodophyta) and related species from Japan and Korea detected by
cleaved amplified polymorphic sequence analysis. Eur J Phycol 42:29–40
Patron NJ, Waller RF, Archibald JM, Keeling PJ (2005) Complex protein targeting to dinoflagellate
plastids. J Mol Biol 348(4):1015–1024
Peters AF, Marie D, Scornet D, Kloareg B, Cock JM (2004) Proposal of Ectocarpus siliculosus as
a model organism for brown algal genetics and genomics. J Phycol 40:1079–1088
Peters AF, Scornet D, Ratin M, Charrier B, Monnier A, Merrien Y, Corre E, Coelho SM,
Cock JM (2008) Life-cycle-generation-specific developmental processes are modified in the
immediate upright mutant of the brown alga Ectocarpus siliculosus. Development 135:
1503–1512
209
Mock T, Samanta MP, Iverson V, Berthiaume C, Robison M, Holtermann K, Durkin C, Bondurant
SS, Richmond K, Rodesch M, Kallas T, Huttlin EL, Cerrina F, Sussman MR, Armbrust EV
(2008) Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana
identifies genes involved in silicon bioprocesses. Proc Natl Acad Sci U S A 105(5):1579–1584
Mock T, Thomas DN (2005) Recent advances in sea-ice microbiology. Environ Microbiol 7:
605–619
Moreira D, López-García P (2002) The molecular ecology of microbial eukaryotes unveils a hidden
world. Trends Microbiol 10:31–38
Morse D, Salois P, Markovic P, Hastings WJ (1995) A Nuclear-Encoded Form II RuBisCO in
Dinoflagellates. Science 268:1622–1624
Moulager M, Monnier A, Jesson B, Bouvet R, Mosser J, Schwartz C, Garnier L, Corellou F, Bouget
FY (2007) Light-dependent regulation of cell division in Ostreococcus: evidence for a major
transcriptional input. Plant Physiol 144:1360–1369
Muhlin JF, Engel CR, Stessel R, Weatherbee RA, Brawley SH (2008) The influence of coastal
topography, circulation patterns, and rafting in structuring populations of an intertidal alga.
Mol Ecol 17:1198–1210
Müller DG (1967) Generationswechsel, Kernphasenwechsel und Sexualität der Braunalge
Ectocarpus siliculosus im Kulturversuch. Planta 141:39–54
Nagasaki K (2008) Dinoflagellates, diatoms, and their viruses. J Microbiol 46:235–243
Nassoury N, Cappadocia M, Morse D (2003) Plastid ultrastructure defines the protein import
pathway in dinoflagellates. J Cell Sci 116:2867–2874
Nikaido I, Asamizu E, Nakajima M, Nakamura Y, Saga N, Tabata S (2000) Generation of 10,154
expressed sequence tags from a leafy gametophyte of a marine red alga, Porphyra yezoensis.
DNA Res 7:223–227
Nosenko T, Bhattacharya D (2007) Horizontal gene transfer in chromalveolates. BMC Evol Biol
7:173
Not F, Valentin K, Romari K, Lovejoy C, Massana R, Töbe K, Vaulot D, Medlin LK (2007)
Picobiliphytes: a marine picoplanktonic algal group with unknown affinities to other eukaryotes. Science 315:253–255
Nowack EC, Melkonian M, Glöckner G (2008) Chromatophore genome sequence of Paulinella
sheds light on acquisition of photosynthesis by eukaryotes. Curr Biol 18:410–418
Ohme M, Miura A (1988) Tetrad analysis in conchospore germlings of Porphyra yezoensis
(Rhodophyta, Bangiales). Plant Sci 57:135–140
Palenik B, Grimwood J, Aerts A, Rouzé P, Salamov A, Putnam N, Dupont C, Jorgensen R, Derelle
E, Rombauts S, Zhou K, Otillar R, Merchant SS, Podell S, Gaasterland T, Napoli C, Gendler
K, Manuell A, Tai V, Vallon O, Piganeau G, Jancek S, Heijde M, Jabbari K, Bowler C, Lohr
M, Robbens S, Werner G, Dubchak I, Pazour GJ, Ren Q, Paulsen I, Delwiche C, Schmutz J,
Rokhsar D, Van de Peer Y, Moreau H, Grigoriev IV (2007) The tiny eukaryote Ostreococcus
provides genomic insights into the paradox of plankton speciation. Proc Natl Acad Sci USA
104:7705–7710
Parfrey LW, Barbero E, Lasser E, Dunthorn M, Bhattacharya D, Patterson DJ, Katz LA (2006)
Evaluating support for the current classification of eukaryotic diversity. PLoS Genet 2:e220
Park E-J, Fukuda S, Endo H, Kitade Y,Saga N (2007) Genetic polymorphism within Porphyra
yezoensis (Bangiales, Rhodophyta) and related species from Japan and Korea detected by
cleaved amplified polymorphic sequence analysis. Eur J Phycol 42:29–40
Patron NJ, Waller RF, Archibald JM, Keeling PJ (2005) Complex protein targeting to dinoflagellate
plastids. J Mol Biol 348(4):1015–1024
Peters AF, Marie D, Scornet D, Kloareg B, Cock JM (2004) Proposal of Ectocarpus siliculosus as
a model organism for brown algal genetics and genomics. J Phycol 40:1079–1088
Peters AF, Scornet D, Ratin M, Charrier B, Monnier A, Merrien Y, Corre E, Coelho SM,
Cock JM (2008) Life-cycle-generation-specific developmental processes are modified in the
immediate upright mutant of the brown alga Ectocarpus siliculosus. Development 135:
1503–1512