3 Populations and Pathways
117
Taris N, Comtet T, Viard F (2009) Inhibitory function of nitric oxide on the onset of metamorphosis
in competent larvae of Crepidula fornicata: a transcriptional perspective. Mar Genomics 2:
161–167
Teranishi KS, Stillman JH (2007) A cDNA microarray analysis of the response to heat stress in
hepatopancreas tissue of the porcelain crab Petrolisthes cinctipes. Comp Biochem Physiol D
2:53–62
Teshima KM, Coop G, Preworski M (2006) How reliable are empirical genomic scans for selective
sweeps?. Genome Res 16:702–712
Tomanek L (2002) The heat shock response: its variation, regulation and ecological importance in
intertidal gastropods (genus Tegula). Am J Physiol Integ Comp Biol 42:797–807
Tomanek L (2005) Two-dimensional gel analysis of the heat shock response in marine snails
(genus Tegula): interspecific variation in protein expression and acclimation ability. J Exp Biol
208:3133–3143
Tomanek L, Somero GN (2000) Time course and magnitude of synthesis of heat shock proteins in
congeneric marine snails (Genus Tegula) from differentb tidal heights. Physiol Biochem Zool
73:249–256
Toth AL, Varala K, Newman TC, Miguez FE, Hutchison SK, Willoughby DA et al. (2007) Wasp
brain gene expression supports an evolutionary link between maternal behavior and eusociality.
Science 318:441–444
Troester MA, Hoadley KA, Parker JS, Perou CM (2004) Prediction of toxicant-specific gene
expression signatures after chemotherapeutic treatment of breast cell lines. Environ Health
Perspect 112:1607–1613
Ungerer MC, Johnson LC, Herman MA (2008) Ecological genomics: understanding gene and
genome function in the natural environment. Heredity 100:178–183
Uthicke S, Conand C (2005) Amplified fragment length polymorphism (AFLP) analysis indicates
the importance of both asexual and sexual reproduction in the fissiparous holothurian Stichopus
chloronotus (Aspidochirotida) in the Indian and Pacific Ocean. Coral Reefs 24:103–111
Vasemägi A, Nilsson J, Primmer CR (2005) Expressed Sequence Tag-Linked Microsatellites as a
Source of Gene-Associated Polymorphisms for Detecting Signatures of Divergent Selection in
Atlantic Salmon (Salmo salar L). Mol Biol Evol 22:1067–1076
Vasemägi A, Primmer CR (2005) Challenges for identifying functionally important genetic variation: the promise of combining complementary research strategies. Mol Ecol 14:3623–3642
Vaughan P (2000) Use of uracil DNA glycosylase in the detection of known DNA mutations and
polymorphisms. Glycosylase-mediated polymorphism detection (GMPD-check). Methods Mol
Biol (Clifton, NJ) 152:169–177
Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA et al. (2004)
Environmental genome shotgun sequencing of the Sargasso Sea. Science 304:66–74
Vera JC, Wheat CW, Fescemyer HW, Frilander MJ, Crawford DL, Hanski I, Marden JH (2008)
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing. Mol
Ecol 17:1636–1647
Verde C, Lecointre G, di Prisco G (2007) The phylogeny of polar fishes and the structure and
molecular evolution of hemoglobin. Polar Biol 30:523–539
Voisin M, Engel C, Viard F (2005) Differential shuffling of native genetic diversity across introduced region in a brown alga: aquaculture vs. maritime traffic effects. Proc Natl Acad Sci USA
102:5432–5437
Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Frijters A, Pot J, Peleman J,
Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucl Acids Res
23:4407–4414
Ward RD, Woodwark M, Skibinski DOF (1994) A comparison of genetic diversity levels in marine,
freshwater, and anadromous fishes. J Fish Biol 44:213–232
Wares JP, Blakeslee AMH (2007) Amplified fragment length polymorphism data provide a poor
solution to the Littorina littorea puzzle. Mar Biol Res 3:168–174
117
Taris N, Comtet T, Viard F (2009) Inhibitory function of nitric oxide on the onset of metamorphosis
in competent larvae of Crepidula fornicata: a transcriptional perspective. Mar Genomics 2:
161–167
Teranishi KS, Stillman JH (2007) A cDNA microarray analysis of the response to heat stress in
hepatopancreas tissue of the porcelain crab Petrolisthes cinctipes. Comp Biochem Physiol D
2:53–62
Teshima KM, Coop G, Preworski M (2006) How reliable are empirical genomic scans for selective
sweeps?. Genome Res 16:702–712
Tomanek L (2002) The heat shock response: its variation, regulation and ecological importance in
intertidal gastropods (genus Tegula). Am J Physiol Integ Comp Biol 42:797–807
Tomanek L (2005) Two-dimensional gel analysis of the heat shock response in marine snails
(genus Tegula): interspecific variation in protein expression and acclimation ability. J Exp Biol
208:3133–3143
Tomanek L, Somero GN (2000) Time course and magnitude of synthesis of heat shock proteins in
congeneric marine snails (Genus Tegula) from differentb tidal heights. Physiol Biochem Zool
73:249–256
Toth AL, Varala K, Newman TC, Miguez FE, Hutchison SK, Willoughby DA et al. (2007) Wasp
brain gene expression supports an evolutionary link between maternal behavior and eusociality.
Science 318:441–444
Troester MA, Hoadley KA, Parker JS, Perou CM (2004) Prediction of toxicant-specific gene
expression signatures after chemotherapeutic treatment of breast cell lines. Environ Health
Perspect 112:1607–1613
Ungerer MC, Johnson LC, Herman MA (2008) Ecological genomics: understanding gene and
genome function in the natural environment. Heredity 100:178–183
Uthicke S, Conand C (2005) Amplified fragment length polymorphism (AFLP) analysis indicates
the importance of both asexual and sexual reproduction in the fissiparous holothurian Stichopus
chloronotus (Aspidochirotida) in the Indian and Pacific Ocean. Coral Reefs 24:103–111
Vasemägi A, Nilsson J, Primmer CR (2005) Expressed Sequence Tag-Linked Microsatellites as a
Source of Gene-Associated Polymorphisms for Detecting Signatures of Divergent Selection in
Atlantic Salmon (Salmo salar L). Mol Biol Evol 22:1067–1076
Vasemägi A, Primmer CR (2005) Challenges for identifying functionally important genetic variation: the promise of combining complementary research strategies. Mol Ecol 14:3623–3642
Vaughan P (2000) Use of uracil DNA glycosylase in the detection of known DNA mutations and
polymorphisms. Glycosylase-mediated polymorphism detection (GMPD-check). Methods Mol
Biol (Clifton, NJ) 152:169–177
Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA et al. (2004)
Environmental genome shotgun sequencing of the Sargasso Sea. Science 304:66–74
Vera JC, Wheat CW, Fescemyer HW, Frilander MJ, Crawford DL, Hanski I, Marden JH (2008)
Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing. Mol
Ecol 17:1636–1647
Verde C, Lecointre G, di Prisco G (2007) The phylogeny of polar fishes and the structure and
molecular evolution of hemoglobin. Polar Biol 30:523–539
Voisin M, Engel C, Viard F (2005) Differential shuffling of native genetic diversity across introduced region in a brown alga: aquaculture vs. maritime traffic effects. Proc Natl Acad Sci USA
102:5432–5437
Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Frijters A, Pot J, Peleman J,
Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucl Acids Res
23:4407–4414
Ward RD, Woodwark M, Skibinski DOF (1994) A comparison of genetic diversity levels in marine,
freshwater, and anadromous fishes. J Fish Biol 44:213–232
Wares JP, Blakeslee AMH (2007) Amplified fragment length polymorphism data provide a poor
solution to the Littorina littorea puzzle. Mar Biol Res 3:168–174