3 Populations and Pathways
115
Qin Y, Liu X, Zhang H, Zhang G, Guo X (2007) Genetic mapping of size-related quantitative trait
loci (QTL) in the bay scallop (Argopecten irradians) using AFLP and microsatellite markers.
Aquaculture 272:281–290
Radonic A, Thulke S, Mackay IM, Landt O, Siegert W, Nitsche A (2004) Guideline to reference
gene selection for quantitative real-time PCR. Biochem Biophys Res Comm 313:856–862
Renn SCP, Aubin-Horth N, Hofmann HA (2004) Biologically meaningful expression profiling
across species using hetrerologous hybridisation to a cDNA microarray. BMC Genom doi:
10.1186/1471-2164-5-42
Ricciardi A, MacIsaac HJ (2000) Recent mass invasion of the north american great lakes by pontocaspian species. Trends Ecol Evol 15:62–65
Roberts DA, Hofmann GE, Somero GN (1997) Heat shock protein expression in Mytilus californianus: Acclimatization (seasonal and tidal height comparisons) and acclimation effects. Biol
Bull 192:309–320
Roberts S, Romano C, Gerlach G (2005) Characterization of EST derived SSRs from the bay
scallop, Argopecten irradians. Mol Ecol Notes 5:567–568
Robinson-Rechavi M, Alibes A, Godzik A (2006) Contribution of electrostatic interactions, compactness and quaternary structure to protein thermostability: Lessons from structural genomics
of Thermotoga maritime. J Mol Biol 356:547–557
Roff DA (2007) Contributions of genomics to life-history theory. Nat Rev Genet 8:116–125
Rogers SM, Bernatchez L (2005) Integrating QTL mapping and genome scans towards the
characterization of candidate loci under parallel selection in the lake whitefish (Coregonus
clupeaformis). Mol Ecol 14:351–361
Rogers SM, Campbell D, Baird SJE, Danzmann RG, Bernatchez L (2001) Combining the analyses of introgressive hybridisation and linkage mapping to investigate the genetic architecture
of population divergence in the lake whitefish (Coregonus clupeaformis, Mitchill). Genetica
111:25–41
Roman J, Darling JA (2007) Paradox lost: genetic diversity and the success of aquatic invasions.
Trends Ecol Evol 22:454–464
Römisch K, Collie N, Soto N, Logue J, Lindsay M, Scheper W, Cheng C-H C (2003) Protein
translocation across the endoplasmic reticulum membrane in cold adapted organisms. J Cell
Sci 116:2875–2883
Royal Society (2005) Ocean acidification due to increasing atmospheric carbon dioxide. Policy
Document 12/05, The Royal Society
Rungis D, Berube Y, Zhang J, Ralph S, Ritland CE, Ellis BE et al. (2004) Robust simple sequence
repeat markers for spruce (Picea spp.) from expressed sequence tags. Theor Appl Genet
109:1283–1294
Ryynänen HJ, Primmer C (2006) Single nucleotide polymorphism (SNP) discovery in duplicated genomes: intron-primed exon-crossing (IPEC) as a strategy for avoiding amplification
of duplicated loci in Atlantic salmon (Salmo salar) and other salmonid fishes. BMC Genom
7:192
Ryynänen HJ, Tonteri A, Vasemägi A, Primmer CR (2007) A comparison of the efficiency of
single nucleotide polymorphisms (SNPs) and microsatellites for the estimates of population
and conservation genetic parameters in Atlantic salmon (Salmo salar). J Hered 98:692–704
Saastamoinen M, Hanski I (2008) Genotypic and environmental effects on flight activity and
oviposition in the Glanville fritillary butterfly. Am Nat 171:701–712
Saavedra C, Bachere E (2006) Bivalve genomics. Aquaculture 256:1–14
Sanchez S, Hourdez S, Lallier F (2007) Identification of proteins involved in the functioning of
Riftia pachyptila symbiosis by Subtractive Suppression Hybridization. BMC Genomics 8:337
Sax DF, Stachowicz JJ, Brown JH, Bruno JF, Dawson MN, Gaines SD, Grosberg RK, Hastings A,
Holt RD, Mayfield MM, O’Connor MI, Rice WR (2007) Ecological and evolutionary insights
from species invasions. Trends Ecol Evol 22:465–471
Schlotterer C (2003) Hitchhiking mapping – functional genomics from the population genetics
perspective. Trends Genet 19:32–38
115
Qin Y, Liu X, Zhang H, Zhang G, Guo X (2007) Genetic mapping of size-related quantitative trait
loci (QTL) in the bay scallop (Argopecten irradians) using AFLP and microsatellite markers.
Aquaculture 272:281–290
Radonic A, Thulke S, Mackay IM, Landt O, Siegert W, Nitsche A (2004) Guideline to reference
gene selection for quantitative real-time PCR. Biochem Biophys Res Comm 313:856–862
Renn SCP, Aubin-Horth N, Hofmann HA (2004) Biologically meaningful expression profiling
across species using hetrerologous hybridisation to a cDNA microarray. BMC Genom doi:
10.1186/1471-2164-5-42
Ricciardi A, MacIsaac HJ (2000) Recent mass invasion of the north american great lakes by pontocaspian species. Trends Ecol Evol 15:62–65
Roberts DA, Hofmann GE, Somero GN (1997) Heat shock protein expression in Mytilus californianus: Acclimatization (seasonal and tidal height comparisons) and acclimation effects. Biol
Bull 192:309–320
Roberts S, Romano C, Gerlach G (2005) Characterization of EST derived SSRs from the bay
scallop, Argopecten irradians. Mol Ecol Notes 5:567–568
Robinson-Rechavi M, Alibes A, Godzik A (2006) Contribution of electrostatic interactions, compactness and quaternary structure to protein thermostability: Lessons from structural genomics
of Thermotoga maritime. J Mol Biol 356:547–557
Roff DA (2007) Contributions of genomics to life-history theory. Nat Rev Genet 8:116–125
Rogers SM, Bernatchez L (2005) Integrating QTL mapping and genome scans towards the
characterization of candidate loci under parallel selection in the lake whitefish (Coregonus
clupeaformis). Mol Ecol 14:351–361
Rogers SM, Campbell D, Baird SJE, Danzmann RG, Bernatchez L (2001) Combining the analyses of introgressive hybridisation and linkage mapping to investigate the genetic architecture
of population divergence in the lake whitefish (Coregonus clupeaformis, Mitchill). Genetica
111:25–41
Roman J, Darling JA (2007) Paradox lost: genetic diversity and the success of aquatic invasions.
Trends Ecol Evol 22:454–464
Römisch K, Collie N, Soto N, Logue J, Lindsay M, Scheper W, Cheng C-H C (2003) Protein
translocation across the endoplasmic reticulum membrane in cold adapted organisms. J Cell
Sci 116:2875–2883
Royal Society (2005) Ocean acidification due to increasing atmospheric carbon dioxide. Policy
Document 12/05, The Royal Society
Rungis D, Berube Y, Zhang J, Ralph S, Ritland CE, Ellis BE et al. (2004) Robust simple sequence
repeat markers for spruce (Picea spp.) from expressed sequence tags. Theor Appl Genet
109:1283–1294
Ryynänen HJ, Primmer C (2006) Single nucleotide polymorphism (SNP) discovery in duplicated genomes: intron-primed exon-crossing (IPEC) as a strategy for avoiding amplification
of duplicated loci in Atlantic salmon (Salmo salar) and other salmonid fishes. BMC Genom
7:192
Ryynänen HJ, Tonteri A, Vasemägi A, Primmer CR (2007) A comparison of the efficiency of
single nucleotide polymorphisms (SNPs) and microsatellites for the estimates of population
and conservation genetic parameters in Atlantic salmon (Salmo salar). J Hered 98:692–704
Saastamoinen M, Hanski I (2008) Genotypic and environmental effects on flight activity and
oviposition in the Glanville fritillary butterfly. Am Nat 171:701–712
Saavedra C, Bachere E (2006) Bivalve genomics. Aquaculture 256:1–14
Sanchez S, Hourdez S, Lallier F (2007) Identification of proteins involved in the functioning of
Riftia pachyptila symbiosis by Subtractive Suppression Hybridization. BMC Genomics 8:337
Sax DF, Stachowicz JJ, Brown JH, Bruno JF, Dawson MN, Gaines SD, Grosberg RK, Hastings A,
Holt RD, Mayfield MM, O’Connor MI, Rice WR (2007) Ecological and evolutionary insights
from species invasions. Trends Ecol Evol 22:465–471
Schlotterer C (2003) Hitchhiking mapping – functional genomics from the population genetics
perspective. Trends Genet 19:32–38