Biotechnological Potential of Marine Microbes References 659
Part E | 26
achievements and future prospects, Adv. Mar.
Biol. 62, 273–337 (2012)
26.26
J.B. Corliss, J. Dymond, L.I. Gordon, J.M. Edmond, R.P. von Herzen, R.D. Ballard, K. Green,
D. Williams, A. Bainbridge, K. Crane, T.H. van
Ande: Submarine thermal springs on the Galapagos Rift, Science 203, 1073–1083 (1979)
26.27
P.W.J.J. Van der Wielen, H. Bolhuis, S. Borin,
D. Daffonchio, C. Corselli, L. Giuliano, G. D’Auria,
G.J. de Lange, A. Huebner, S.P. Varnavas, J. Thomson, C. Tamburini, D. Marty, T.J. McGenity,
K.N. Timmis, BioDeep Scientific Party: The enigma
of prokaryotic life in deep hypersaline anoxic
basins, Science 307, 121–123 (2005)
26.28
B.B. Jörgensen, A. Boetius: Feast and famine –
microbial life in the deep-sea bed, Nature 5, 770–
781 (2007)
26.29
J. Kennedy, B. Flemer, S.A. Jackson, D.P.H. Lejon,
J.P. Morrissey, F. O’Gara, A.D.W. Dobson: Marine
metagenomics: new tools for the study and exploitation of marine microbial metabolism, Mar.
Drugs 8, 608–628 (2010)
26.30
A. Dufresne, L. Garczarek, F. Partensky: Accelerated evolution associated with genome reduction
in a free-living prokaryote, Genome Biol. 6, R14
(2005)
26.31
S.J. Giovannoni, H.J. Tripp, S. Givan, M. Podar, K.L. Vergin, D. Baptista, L. Bibbs, J. Eads,
T.H. Richardson, M. Noordewier, M.S. Rappe,
J.M. Short, J.C. Carrington, E.J. Mathur: Genome
streamlining in a cosmopolitan oceanic bacterium, Science 309, 1242–1245 (2005)
26.32
A. Debbab, A.H. Aly, W.H. Lin, P. Proksch: Bioactive compounds from marine bacteria and fungi,
Microb. Biotechnology 3, 544–563 (2010)
26.33
M.G. Weinbauer: Ecology of prokaryotic viruses,
FEMS Microbiol. Reviews 28, 127–181 (2004)
26.34
C.A. Suttle: Marine viruses – major players in the
global ecosystem, Nat. Rev. Microbiol. 5, 801–812
(2007)
26.35
F. Azam, A.Z. Worden: Microbes, molecules, and
marine ecosystems, Science 303, 1622–1624 (2004)
26.36
F. Rohwer, R. Vega Thurber: Viruses manipulate
the marine environment, Nature 459, 207–212
(2009)
26.37
H. Brussow, R.W. Hendrix: Phage genomics: small
is beautiful, Cell 108, 13–16 (2002)
26.38
R. Danovaro, A. Dell’Anno, C. Corinaldesi, M. Magagnini, R. Noble, C. Tamburini, M. Weinbauer:
Major viral impact on the functioning of benthic deep-sea ecosystems, Nature 454, 1084–1088
(2008)
26.39
S.J. Williamson, D.B. Rusch, S. Yooseph,
A.L. Halpern, K.B. Heidelberg, J.I. Glass,
C. Andrews-Pfannkoch, D. Fadrosh, C.S. Miller,
G. Sutton, M. Frazier, C. Venter: The Sorcerer
II Global Ocean Sampling expedition: Metagenomic characterization of viruses within aquatic
microbial samples, PLoS ONE 3(1), e1456 (2008)
26.40
B. Levin, J. Bull: Phage therapy revisited: the
population biology of a bacterial infection and
its treatment with bacteriophage and antibiotics,
Am. Naturalised 147, 881–898 (1996)
26.41
T.P. Hughes, A.H. Baird, D.R. Bellwood, M. Card,
S.R. Connolly, C. Folke, R. Grosberg, O. HoeghGuldberg, J.B.C. Jackson, J. Kleypas, J.M. Lough,
P. Marshall, M. Nyström, S.R. Palumbi, J.M. Pandolfi, B. Rosen, J. Roughgarden: Climate change,
human impacts, and the resilience of coral reefs,
Science 5635, 929–933 (2003)
26.42
R. Efrony, Y. Loya, E. Bacharach, E. Rosenberg:
Phage therapy of coral disease, Coral Reefs 26, 7–
13 (2007)
26.43
Y. Cohen, F.J. Pollock, E. Rosenberg, D.G. Bourne:
Phage therapy treatment of the coral pathogen
Vibrio coralliilyticus, Microbiol. Open 2, 64–74
(2013)
26.44
M. Onji, S. Nakano, S. Suzuki: Virus-like particles suppress growth of the red-tide-forming
marine dinoflagellate Gymnodinium mikimotoi,
Mar. Biotechnology 5, 435–442 (2003)
26.45
E.F. DeLong: Archaea in coastal marine environments, Proc. Natl. Acad. Sci. USA 89, 5685–5689
(1992)
26.46
E.F. DeLong: Everything in moderation: Archaea
as “nonextremophiles”, Curr. Opin. Genet. Dev. 8,
649–654 (1998)
26.47
D. Prangishvili, P. Forterre, R.A. Garrett: Viruses of
the Archaea: a unifying view, Nat. Rev. Microbiol.
4, 837–848 (2006)
26.48
K.S. Lundberg, D.D. Shoemaker, M.W.W. Adams,
J.M. Short, J.A. Sorge, E.J. Mathur: High-fidelity
amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus, Gene
108, 1–6 (1991)
26.49
Y. Cho, H.S. Lee, Y.J. Kim, S.G. Kang, S.-J. Kim,
J.-H. Lee: Characterization of a dUTPase from the
hyperthermophilic Archaeon Thermococcus onnurineus NA1 and its application in polymerase
chain reaction amplification, Mar. Biotechnology
9, 450–458 (2007)
26.50
Y.H. Tapilatu, V. Grossi, M. Acquaviva, C. Militon,
J.-C. Bertrand, P. Cuny: Isolation of hydrocarbondegrading extremely halophilic Archaea from an
uncontaminated hypersaline pond (Camargue,
France), Extremophiles 14, 225–231 (2011)
26.51
M.B. Karner, E.F. DeLong, D.M. Karl: Archaeal
dominance in the mesopelagic zone of the Pacific
Ocean, Nature 409, 507–510 (2001)
26.52
J.S. Lipp, Y. Morono, F. Inagaki, K.-U. Hinrichs:
Significant contribution of Archaea to extant
biomass in marine subsurface sediments, Nature
454, 991–994 (2008)
26.53
K.S. Lam: Discovery of novel metabolites from
marine actinomycetes, Curr. Opin. Microbiol. 9,
245–251 (2006)
26.54
L. Gram, J. Melchiorsen, J.B. Bruhn: Antibacterial
activity of marine culturable bacteria collected
Part E | 26
achievements and future prospects, Adv. Mar.
Biol. 62, 273–337 (2012)
26.26
J.B. Corliss, J. Dymond, L.I. Gordon, J.M. Edmond, R.P. von Herzen, R.D. Ballard, K. Green,
D. Williams, A. Bainbridge, K. Crane, T.H. van
Ande: Submarine thermal springs on the Galapagos Rift, Science 203, 1073–1083 (1979)
26.27
P.W.J.J. Van der Wielen, H. Bolhuis, S. Borin,
D. Daffonchio, C. Corselli, L. Giuliano, G. D’Auria,
G.J. de Lange, A. Huebner, S.P. Varnavas, J. Thomson, C. Tamburini, D. Marty, T.J. McGenity,
K.N. Timmis, BioDeep Scientific Party: The enigma
of prokaryotic life in deep hypersaline anoxic
basins, Science 307, 121–123 (2005)
26.28
B.B. Jörgensen, A. Boetius: Feast and famine –
microbial life in the deep-sea bed, Nature 5, 770–
781 (2007)
26.29
J. Kennedy, B. Flemer, S.A. Jackson, D.P.H. Lejon,
J.P. Morrissey, F. O’Gara, A.D.W. Dobson: Marine
metagenomics: new tools for the study and exploitation of marine microbial metabolism, Mar.
Drugs 8, 608–628 (2010)
26.30
A. Dufresne, L. Garczarek, F. Partensky: Accelerated evolution associated with genome reduction
in a free-living prokaryote, Genome Biol. 6, R14
(2005)
26.31
S.J. Giovannoni, H.J. Tripp, S. Givan, M. Podar, K.L. Vergin, D. Baptista, L. Bibbs, J. Eads,
T.H. Richardson, M. Noordewier, M.S. Rappe,
J.M. Short, J.C. Carrington, E.J. Mathur: Genome
streamlining in a cosmopolitan oceanic bacterium, Science 309, 1242–1245 (2005)
26.32
A. Debbab, A.H. Aly, W.H. Lin, P. Proksch: Bioactive compounds from marine bacteria and fungi,
Microb. Biotechnology 3, 544–563 (2010)
26.33
M.G. Weinbauer: Ecology of prokaryotic viruses,
FEMS Microbiol. Reviews 28, 127–181 (2004)
26.34
C.A. Suttle: Marine viruses – major players in the
global ecosystem, Nat. Rev. Microbiol. 5, 801–812
(2007)
26.35
F. Azam, A.Z. Worden: Microbes, molecules, and
marine ecosystems, Science 303, 1622–1624 (2004)
26.36
F. Rohwer, R. Vega Thurber: Viruses manipulate
the marine environment, Nature 459, 207–212
(2009)
26.37
H. Brussow, R.W. Hendrix: Phage genomics: small
is beautiful, Cell 108, 13–16 (2002)
26.38
R. Danovaro, A. Dell’Anno, C. Corinaldesi, M. Magagnini, R. Noble, C. Tamburini, M. Weinbauer:
Major viral impact on the functioning of benthic deep-sea ecosystems, Nature 454, 1084–1088
(2008)
26.39
S.J. Williamson, D.B. Rusch, S. Yooseph,
A.L. Halpern, K.B. Heidelberg, J.I. Glass,
C. Andrews-Pfannkoch, D. Fadrosh, C.S. Miller,
G. Sutton, M. Frazier, C. Venter: The Sorcerer
II Global Ocean Sampling expedition: Metagenomic characterization of viruses within aquatic
microbial samples, PLoS ONE 3(1), e1456 (2008)
26.40
B. Levin, J. Bull: Phage therapy revisited: the
population biology of a bacterial infection and
its treatment with bacteriophage and antibiotics,
Am. Naturalised 147, 881–898 (1996)
26.41
T.P. Hughes, A.H. Baird, D.R. Bellwood, M. Card,
S.R. Connolly, C. Folke, R. Grosberg, O. HoeghGuldberg, J.B.C. Jackson, J. Kleypas, J.M. Lough,
P. Marshall, M. Nyström, S.R. Palumbi, J.M. Pandolfi, B. Rosen, J. Roughgarden: Climate change,
human impacts, and the resilience of coral reefs,
Science 5635, 929–933 (2003)
26.42
R. Efrony, Y. Loya, E. Bacharach, E. Rosenberg:
Phage therapy of coral disease, Coral Reefs 26, 7–
13 (2007)
26.43
Y. Cohen, F.J. Pollock, E. Rosenberg, D.G. Bourne:
Phage therapy treatment of the coral pathogen
Vibrio coralliilyticus, Microbiol. Open 2, 64–74
(2013)
26.44
M. Onji, S. Nakano, S. Suzuki: Virus-like particles suppress growth of the red-tide-forming
marine dinoflagellate Gymnodinium mikimotoi,
Mar. Biotechnology 5, 435–442 (2003)
26.45
E.F. DeLong: Archaea in coastal marine environments, Proc. Natl. Acad. Sci. USA 89, 5685–5689
(1992)
26.46
E.F. DeLong: Everything in moderation: Archaea
as “nonextremophiles”, Curr. Opin. Genet. Dev. 8,
649–654 (1998)
26.47
D. Prangishvili, P. Forterre, R.A. Garrett: Viruses of
the Archaea: a unifying view, Nat. Rev. Microbiol.
4, 837–848 (2006)
26.48
K.S. Lundberg, D.D. Shoemaker, M.W.W. Adams,
J.M. Short, J.A. Sorge, E.J. Mathur: High-fidelity
amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus, Gene
108, 1–6 (1991)
26.49
Y. Cho, H.S. Lee, Y.J. Kim, S.G. Kang, S.-J. Kim,
J.-H. Lee: Characterization of a dUTPase from the
hyperthermophilic Archaeon Thermococcus onnurineus NA1 and its application in polymerase
chain reaction amplification, Mar. Biotechnology
9, 450–458 (2007)
26.50
Y.H. Tapilatu, V. Grossi, M. Acquaviva, C. Militon,
J.-C. Bertrand, P. Cuny: Isolation of hydrocarbondegrading extremely halophilic Archaea from an
uncontaminated hypersaline pond (Camargue,
France), Extremophiles 14, 225–231 (2011)
26.51
M.B. Karner, E.F. DeLong, D.M. Karl: Archaeal
dominance in the mesopelagic zone of the Pacific
Ocean, Nature 409, 507–510 (2001)
26.52
J.S. Lipp, Y. Morono, F. Inagaki, K.-U. Hinrichs:
Significant contribution of Archaea to extant
biomass in marine subsurface sediments, Nature
454, 991–994 (2008)
26.53
K.S. Lam: Discovery of novel metabolites from
marine actinomycetes, Curr. Opin. Microbiol. 9,
245–251 (2006)
26.54
L. Gram, J. Melchiorsen, J.B. Bruhn: Antibacterial
activity of marine culturable bacteria collected