185
den Hartog C, Kuo J (2006) Taxonomy and biogeography of seagrasses. In: Larkum A, Orth R,
Duarte C (eds) Seagrasses: biology, ecology and conservation. Springer, Dordrecht
Duarte C (1991) Seagrass depth limits. Aquat Bot 40:363–377
Duffy J (2006) Biodiversity and the functioning of seagrass ecosystems. Mar Ecol Prog Ser
311:233–250
Duffy JE, Reynolds PL, Boström C, Coyer JA, Cusson M, Donadi S, Douglass JG, Eklöf JS,
Engelen AH, Eriksson BK, Fredriksen S, Gamfeldt L, Gustafsson C, Hoarau G, Hori M, Hovel
K, Iken K, Lefcheck JS, Moksnes P-O, Nakaoka M, O'Connor MI, Olsen JL, Richardson JP,
Ruesink JL, Sotka EE, Thormar J, Whalen MA, Stachowicz JJ (2015) Biodiversity mediates
top–down control in eelgrass ecosystems: a global comparative-experimental approach. Ecol
Lett 18(7):696–705
Durako M (1993) Photosynthetic utilization of CO 2(aq) and HCO 3
− in Thalassia testudinum
(Hydrocharitacae). Mar Biol 115:373–380
Eriksson BK, Ljunggren L, Sandström A, Johansson G, Mattila J, Rubach A, Råberg S, Snickars M
(2009) Declines in predatory fish promote bloom-forming macroalgae. Ecol Appl 19:1975–1988
Evans AS, Webb KL, Penhale PA (1986) Photosynthetic temperature acclimation in two coexisting
seagrasses, Zostera marina L. and Ruppia maritima L. Aquat Bot 24:185–197
Faber P, Evrard V, Woodland R, Cartwright I, Cook P (2014) Pore-water exchange driven by tidal
pumping causes alkalinity export in two intertidal inlets. Limnol Oceanogr 59:1749–1763
Faber P, Kessler A, Bull J, McKelvie I, Meysman F, Cook P (2012) The role of alkalinity generation
in controlling the fluxes of CO 2 during exposure and inundation on tidal flats. Biogeosciences
9:4087–4097
Falkowski P, Raven J (2007) Aquatic photosynthesis. Princeton, Princeton, NJ
Field C, Mooney H (1986) The photosynthesis-nitrogen relationship in wild plants. In: Givnish
T (ed) On the economy of plant form and function. Cambridge University Press, Cambridge
Goldhaber M (2003) Sulfur-rich sediments. In: Mackenzie F (ed) Treatise on geochemistry.
Elsevier, Amsterdam
Gould S (1978) The panda’s peculiar thumb. Nat Hist 87:20–30
Greening HS, Cross L, Sherwood E (2011) A multiscale approach to seagrass recovery in Tampa
Bay, Florida. Ecol Restor 29:82–93
Hall-Spencer J, Rodolfo-Metalpa R, Martin S, Ransome E, Fine M, Turner S, Rowley S, Tedesco
D, Buia M-C (2008) Volcanic carbon dioxide vents show ecosystem effects of ocean acidification. Nature 454:96–99
Hanke G, Holtgrefe S, König N, Strodtkötter I, Voss I, Scheibe R (2009) Use of transgenic plants to
uncover strategies for maintenance of redox homeostasis during photosynthesis. In: Jean-Pierre
J (ed) Advances in botanical research, vol 52. Elsevier, Amsterdam, pp 207–251
Hartog CD, Loenhoud PJV, Roelofs JGM, Van de Sande JCPM (1979) Chromosome number from
three seagrasses from the Netherlands Antilles. Aquat Bot 7:267–271
Heck KL, Carmthers TJB, Duarte CM, Hughes AR, Kendrick G, Orth RJ, Williams SW (2008)
Trophic transfers from seagrass meadows subsidize diverse marine and terrestrial consumers.
Ecosystems 11:1198–1210
Hemminga M, Mateo M (1996) Stable carbon isotopes in seagrasses: variability in ratios and use
in ecological studies. Mar Ecol Prog Ser 140:285–298
Higgs ND, Newton J, Attrill MJ (2016) Caribbean spiny lobster fishery is underpinned by trophic
subsidies from chemosynthetic primary production. Curr Biol 26(24):3393–3398
Holmer M, Nielsen R (2007) Effects of filamentous algal mats on sulfide invasion in eelgrass
(Zostera marina). J Exp Mar Biol Ecol 353:245–252
Hu X, Burdige D (2008) Shallow marine carbonate dissolution and early diagenesis: implications
from an incubation study. J Mar Res 66:489–527
Hu X, Cai W (2011) An assessment of ocean margin anaerobic processes on oceanic alkalinity
budget. Global Biogeochem Cycles 25(3):GB3003
Hughes BB, Hammerstrom KK, Grant NE, Hoshijima U, Eby R, Wasson K (2016) Trophic cascades on the edge: fostering seagrass resilience via a novel pathway. Oecologia 182:231–241
8 Systems Biology and the Seagrass Paradox…
den Hartog C, Kuo J (2006) Taxonomy and biogeography of seagrasses. In: Larkum A, Orth R,
Duarte C (eds) Seagrasses: biology, ecology and conservation. Springer, Dordrecht
Duarte C (1991) Seagrass depth limits. Aquat Bot 40:363–377
Duffy J (2006) Biodiversity and the functioning of seagrass ecosystems. Mar Ecol Prog Ser
311:233–250
Duffy JE, Reynolds PL, Boström C, Coyer JA, Cusson M, Donadi S, Douglass JG, Eklöf JS,
Engelen AH, Eriksson BK, Fredriksen S, Gamfeldt L, Gustafsson C, Hoarau G, Hori M, Hovel
K, Iken K, Lefcheck JS, Moksnes P-O, Nakaoka M, O'Connor MI, Olsen JL, Richardson JP,
Ruesink JL, Sotka EE, Thormar J, Whalen MA, Stachowicz JJ (2015) Biodiversity mediates
top–down control in eelgrass ecosystems: a global comparative-experimental approach. Ecol
Lett 18(7):696–705
Durako M (1993) Photosynthetic utilization of CO 2(aq) and HCO 3
− in Thalassia testudinum
(Hydrocharitacae). Mar Biol 115:373–380
Eriksson BK, Ljunggren L, Sandström A, Johansson G, Mattila J, Rubach A, Råberg S, Snickars M
(2009) Declines in predatory fish promote bloom-forming macroalgae. Ecol Appl 19:1975–1988
Evans AS, Webb KL, Penhale PA (1986) Photosynthetic temperature acclimation in two coexisting
seagrasses, Zostera marina L. and Ruppia maritima L. Aquat Bot 24:185–197
Faber P, Evrard V, Woodland R, Cartwright I, Cook P (2014) Pore-water exchange driven by tidal
pumping causes alkalinity export in two intertidal inlets. Limnol Oceanogr 59:1749–1763
Faber P, Kessler A, Bull J, McKelvie I, Meysman F, Cook P (2012) The role of alkalinity generation
in controlling the fluxes of CO 2 during exposure and inundation on tidal flats. Biogeosciences
9:4087–4097
Falkowski P, Raven J (2007) Aquatic photosynthesis. Princeton, Princeton, NJ
Field C, Mooney H (1986) The photosynthesis-nitrogen relationship in wild plants. In: Givnish
T (ed) On the economy of plant form and function. Cambridge University Press, Cambridge
Goldhaber M (2003) Sulfur-rich sediments. In: Mackenzie F (ed) Treatise on geochemistry.
Elsevier, Amsterdam
Gould S (1978) The panda’s peculiar thumb. Nat Hist 87:20–30
Greening HS, Cross L, Sherwood E (2011) A multiscale approach to seagrass recovery in Tampa
Bay, Florida. Ecol Restor 29:82–93
Hall-Spencer J, Rodolfo-Metalpa R, Martin S, Ransome E, Fine M, Turner S, Rowley S, Tedesco
D, Buia M-C (2008) Volcanic carbon dioxide vents show ecosystem effects of ocean acidification. Nature 454:96–99
Hanke G, Holtgrefe S, König N, Strodtkötter I, Voss I, Scheibe R (2009) Use of transgenic plants to
uncover strategies for maintenance of redox homeostasis during photosynthesis. In: Jean-Pierre
J (ed) Advances in botanical research, vol 52. Elsevier, Amsterdam, pp 207–251
Hartog CD, Loenhoud PJV, Roelofs JGM, Van de Sande JCPM (1979) Chromosome number from
three seagrasses from the Netherlands Antilles. Aquat Bot 7:267–271
Heck KL, Carmthers TJB, Duarte CM, Hughes AR, Kendrick G, Orth RJ, Williams SW (2008)
Trophic transfers from seagrass meadows subsidize diverse marine and terrestrial consumers.
Ecosystems 11:1198–1210
Hemminga M, Mateo M (1996) Stable carbon isotopes in seagrasses: variability in ratios and use
in ecological studies. Mar Ecol Prog Ser 140:285–298
Higgs ND, Newton J, Attrill MJ (2016) Caribbean spiny lobster fishery is underpinned by trophic
subsidies from chemosynthetic primary production. Curr Biol 26(24):3393–3398
Holmer M, Nielsen R (2007) Effects of filamentous algal mats on sulfide invasion in eelgrass
(Zostera marina). J Exp Mar Biol Ecol 353:245–252
Hu X, Burdige D (2008) Shallow marine carbonate dissolution and early diagenesis: implications
from an incubation study. J Mar Res 66:489–527
Hu X, Cai W (2011) An assessment of ocean margin anaerobic processes on oceanic alkalinity
budget. Global Biogeochem Cycles 25(3):GB3003
Hughes BB, Hammerstrom KK, Grant NE, Hoshijima U, Eby R, Wasson K (2016) Trophic cascades on the edge: fostering seagrass resilience via a novel pathway. Oecologia 182:231–241
8 Systems Biology and the Seagrass Paradox…