157
Driever SM, Baker NR (2011) The water-water cycle in leaves is not a major alternative electron
sink for dissipation of excess excitation energy when CO 2 assimilation is restricted. Plant Cell
Environ 34:837–846
Duanmu D, Bachy C, Sudek S, Wong CH, Jiménez V, Rockwell NC, Martin SS, Ngan CY,
Reistetter EM, van Baren MJ, Price DC, Wei CL, Reyes-Prieto A, Lagarias JC, Worden A
(2014) Marine algae and land plants share conserved phytochrome signaling systems. Proc
Natl Acad Sci U S A 111:15827–15832
Eckardt NA (2012) Mapping the barley chloroplast transcriptome. Plant Cell 24:3
Ehleringer JR, Cerling TE, Helliker BR (1997) C4 photosynthesis, atmospheric CO 2 , and climate.
Oecologia 112:285–299
Facella P, Lopez L, Carbone F, Galbraith DW, Giuliano G, Perrotta G (2008) Diurnal and circadian
rhythms in the tomato transcriptome and their modulation by cryptochrome photoreceptors.
PLoS One 3(7):e2798
Ferrat L, Bingert A, Roméo M, Gnassia-Barelli M, Pergent-Martini C (2002a) Mercury uptake and
enzymatic response of Posidonia oceanica after an exposure to organic and inorganic forms.
Environ Toxicol Chem 21:2365–2371
Ferrat L, Roméo M, Gnassia-Barelli M, Pergent-Martini C (2002b) Effects of mercury on antioxidant mechanisms in the marine phanerogam Posidonia oceanica. Dis Aquat Org 50:157–160
Ferrat L, Pergent-Martini C, Romeo M, Fernandez C (2002c) Is glutathione transferase (GST) activity in Posidonia oceanica a stress response to mercury exposure? Bull Mar Sci 71:1183–1190
Ferrat L, Gnassia-Barelli M, Pergent-Martini C, Roméo M (2003) Mercury and non-protein thiol
compounds in the seagrass Posidonia oceanica. Comp Biochem Physiol C 134:147–155
Flanigan YS, Critchley C (1996) Light response of D1 turnover and photosystem II efficiency in
the seagrass Zostera capricorni. Planta 198:319–323
Foyer CH, Noctor G (2000) Oxygen processing in photosynthesis: regulation and signalling. New
Phytol 146:359–388
Franssen SU, Gu J, Bergmann N, Winters G, Klostermeier UC, Rosenstiel P, Bornberg-Bauer
E, Reusch TBH (2011) Transcriptomic resilience to global warming in the seagrass Zostera
marina, a marine foundation species. Proc Natl Acad Sci U S A 108:19276–19281
Fukushima A, Kusano M (2014) A network perspective on nitrogen metabolism from model to
crop plants using integrated ‘omics’ approaches. J Exp Bot 65:5619–5630
Fürtig K, Rüegsegger A, Brunold C, Brändle R (1996) Sulphide utilization and injuries in hypoxic
roots and rhizomes of common reed (Phragmites australis). Folia Geobot Phytotax 31:143–151
Gallegos CL, Kenworthy JW (1996) Seagrass depth limits in the Indian River Lagoon (Florida):
application of an optical water quality model. Estuar Coast Mar Sci 42:267–288
Gillespie KM, Xu F, Richter KT, McGrath JM, Markelz RC, Ort DR (2012) Greater antioxidant
and respiratory metabolism in field-grown soybean exposed to elevated O 3 under both ambient
and elevated CO 2 . Plant Cell Environ 35:169–184
Giordani T, Natali L, Maserti BE, Taddei S, Cavallini A (2000) Characterization and expression
of DNA sequences encoding putative type-II Metallothioneins in the seagrass Posidonia oceanica. Plant Physiol 123:1571–1582
Goodman JL, Moore KA, Dennison WC (1995) Photosynthetic responses of eelgrass (Zostera
marina) to light and sediment sulfide in a shallow barrier island lagoon. Aquat Bot 50:37–47
Govers LL, Lamers LPM, Bouma TJ, Eygensteyn J, de Brouwer JHF, Hendriks AJ, Huijberse CM,
van Katwijk MM (2014) Seagrasses as indicators for coastal trace metal pollution: a global
meta-analysis serving as a benchmark, and a Caribbean case study. Environ Pollut 195:210–217
Greco M, Chiappetta A, Bruno L, Bitonti MB (2013) Effects of light deficiency on genome methylation in Posidonia oceanica. Mar Ecol Prog Ser 473:103–114
Greve TM, Borum J, Pedersen O (2003) Meristematic oxygen variability in eelgrass (Zostera
marina). Limnol Oceanograp 48:210–216
Gausman HW (1982) Visible light reflectance, transmittance, and absorptance of differently pigmented cotton leaves. Remote Sens Environ 13:233–238
7 Photobiology of Seagrasses: A Systems Biology Perspective
Driever SM, Baker NR (2011) The water-water cycle in leaves is not a major alternative electron
sink for dissipation of excess excitation energy when CO 2 assimilation is restricted. Plant Cell
Environ 34:837–846
Duanmu D, Bachy C, Sudek S, Wong CH, Jiménez V, Rockwell NC, Martin SS, Ngan CY,
Reistetter EM, van Baren MJ, Price DC, Wei CL, Reyes-Prieto A, Lagarias JC, Worden A
(2014) Marine algae and land plants share conserved phytochrome signaling systems. Proc
Natl Acad Sci U S A 111:15827–15832
Eckardt NA (2012) Mapping the barley chloroplast transcriptome. Plant Cell 24:3
Ehleringer JR, Cerling TE, Helliker BR (1997) C4 photosynthesis, atmospheric CO 2 , and climate.
Oecologia 112:285–299
Facella P, Lopez L, Carbone F, Galbraith DW, Giuliano G, Perrotta G (2008) Diurnal and circadian
rhythms in the tomato transcriptome and their modulation by cryptochrome photoreceptors.
PLoS One 3(7):e2798
Ferrat L, Bingert A, Roméo M, Gnassia-Barelli M, Pergent-Martini C (2002a) Mercury uptake and
enzymatic response of Posidonia oceanica after an exposure to organic and inorganic forms.
Environ Toxicol Chem 21:2365–2371
Ferrat L, Roméo M, Gnassia-Barelli M, Pergent-Martini C (2002b) Effects of mercury on antioxidant mechanisms in the marine phanerogam Posidonia oceanica. Dis Aquat Org 50:157–160
Ferrat L, Pergent-Martini C, Romeo M, Fernandez C (2002c) Is glutathione transferase (GST) activity in Posidonia oceanica a stress response to mercury exposure? Bull Mar Sci 71:1183–1190
Ferrat L, Gnassia-Barelli M, Pergent-Martini C, Roméo M (2003) Mercury and non-protein thiol
compounds in the seagrass Posidonia oceanica. Comp Biochem Physiol C 134:147–155
Flanigan YS, Critchley C (1996) Light response of D1 turnover and photosystem II efficiency in
the seagrass Zostera capricorni. Planta 198:319–323
Foyer CH, Noctor G (2000) Oxygen processing in photosynthesis: regulation and signalling. New
Phytol 146:359–388
Franssen SU, Gu J, Bergmann N, Winters G, Klostermeier UC, Rosenstiel P, Bornberg-Bauer
E, Reusch TBH (2011) Transcriptomic resilience to global warming in the seagrass Zostera
marina, a marine foundation species. Proc Natl Acad Sci U S A 108:19276–19281
Fukushima A, Kusano M (2014) A network perspective on nitrogen metabolism from model to
crop plants using integrated ‘omics’ approaches. J Exp Bot 65:5619–5630
Fürtig K, Rüegsegger A, Brunold C, Brändle R (1996) Sulphide utilization and injuries in hypoxic
roots and rhizomes of common reed (Phragmites australis). Folia Geobot Phytotax 31:143–151
Gallegos CL, Kenworthy JW (1996) Seagrass depth limits in the Indian River Lagoon (Florida):
application of an optical water quality model. Estuar Coast Mar Sci 42:267–288
Gillespie KM, Xu F, Richter KT, McGrath JM, Markelz RC, Ort DR (2012) Greater antioxidant
and respiratory metabolism in field-grown soybean exposed to elevated O 3 under both ambient
and elevated CO 2 . Plant Cell Environ 35:169–184
Giordani T, Natali L, Maserti BE, Taddei S, Cavallini A (2000) Characterization and expression
of DNA sequences encoding putative type-II Metallothioneins in the seagrass Posidonia oceanica. Plant Physiol 123:1571–1582
Goodman JL, Moore KA, Dennison WC (1995) Photosynthetic responses of eelgrass (Zostera
marina) to light and sediment sulfide in a shallow barrier island lagoon. Aquat Bot 50:37–47
Govers LL, Lamers LPM, Bouma TJ, Eygensteyn J, de Brouwer JHF, Hendriks AJ, Huijberse CM,
van Katwijk MM (2014) Seagrasses as indicators for coastal trace metal pollution: a global
meta-analysis serving as a benchmark, and a Caribbean case study. Environ Pollut 195:210–217
Greco M, Chiappetta A, Bruno L, Bitonti MB (2013) Effects of light deficiency on genome methylation in Posidonia oceanica. Mar Ecol Prog Ser 473:103–114
Greve TM, Borum J, Pedersen O (2003) Meristematic oxygen variability in eelgrass (Zostera
marina). Limnol Oceanograp 48:210–216
Gausman HW (1982) Visible light reflectance, transmittance, and absorptance of differently pigmented cotton leaves. Remote Sens Environ 13:233–238
7 Photobiology of Seagrasses: A Systems Biology Perspective