156
Collier CJ, Lavery PS, Ralph PJ, Masini RJ (2008) Physiological characteristics of the seagrass
Posidonia sinuosa along a depth-related gradient of light availability. Mar Ecol Prog Ser
353:65–79
Collier CJ, Uthicke S, Waycott M (2011) Thermal tolerance of two seagrass species at contrasting
light levels: implications for future distribution in the Great Barrier Reef. Limnol Oceanogr
56:2200–2210
Cornic G, Briantais JM (1991) Partitioning of photosynthetic electron flow between CO 2 and
O 2 reduction in a C3 leaf (Phaseolus vulgaris L.) at different CO 2 concentrations and during
drought stress. Planta 183:178–184
Cousins AB, Bloom AJ (2004) Oxygen consumption during leaf nitrate assimilation in a C3 and
C4 plant: the role of mitochondrial respiration. Plant Cell Environ 27:1537–1545
Cox TE, Gazeau F, Alliouane S, Hendriks IE, Mahacek P, Le Fur A, Gattuso J-P (2016) Effects
of in situ CO 2 enrichment on structural characteristics, photosynthesis, and growth of the
Mediterranean seagrass Posidonia oceanica. Biogeosciences 13:2179–2194
Cozza R, Pangaro T, Maestrini P, Giordani T, Natali L, Cavallini A (2006) Isolation of putative type
2 metallothionein encoding sequences and spatial expression pattern in the seagrass Posidonia
oceanica. Aquat Bot 85:317–323
Crafts-Brandner SJ, Salvucci ME (2000) Rubisco activase constrains the photosynthetic potential
of leaves at high temperature and CO 2 . Proc Natl Acad Sci U S A 97:13430–13435
Dattolo E, Gu J, Bayer PE, Mazzuca S, Serra IA, Spadafora A, Bernardo L, Natali L, Cavallini
A, Procaccini G (2013) Acclimation to different depths by the marine angiosperm Posidonia
oceanica: transcriptomic and proteomic profiles. Front Plant Sci 4:1–15
Dattolo E, Marín-Guirao L, Ruiz JM, Procaccini G (2017) Long-term acclimation to reciprocal
light conditions suggests depth-related selection in the marine foundation species Posidonia
oceanica. Ecol Evol 7:1148–1164
Dattolo E, Ruocco M, Brunet C, Lorenti M, Lauritano C, D’Esposito D, De Luca P, Sanges R,
Mazzuca S, Procaccini G (2014) Response of the seagrass Posidonia oceanica to different
light environments: insights from a combined molecular and photo-physicological study. Mar
Environ Res 101:225–236
Davey PA, Pernice M, Sablok G, Larkum A, Lee HT, Golicz A, Edwards D, Dolferus R, Ralph P
(2016) The emergence of molecular profiling and omics techniques in seagrass biology; furthering our understanding of seagrasses. Funct Integr Genomics 16:465–480
De Oliveira Dal’Molin CG, Quek LE, Palfreyman RW, Brumbley SM, Nielsen LK (2010)
AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis.
Plant Physiol 152:579–589
Deng Y, Yao J, Wang X, Guo H, Duan D (2012) Transcriptome sequencing and comparative analysis of Saccharina japonica (Laminariales, Phaeophyceae) under blue light induction. PLoS
One 7(6):e39704
Dennison WC, Alberte RS (1982) Photosynthetic response of Zostera marina L. (eelgrass) to in
situ manipulations of light intensity. Oecologia 55:137–144
Dent RM, Haglund CM, Chin BL, Kobayashi MC, Niyogi KK (2005) Functional genomics of
eukaryotic photosynthesis using insertional mutagenesis of Chlamydomonas reinhardtii. Plant
Physiol 137:545–556
Dent RM, Han M, Niyogi KK (2001) Functional genomics of plant photosynthesis in the fast lane
using Chlamydomonas reinhardtii. Trends Plant Sci 6:364–371
Dewez D, Geoffroy L, Vernet G, Popovic R (2005) Determination of photosynthetic and enzymatic biomarkers sensitivity used to evaluate toxic effects of copper and fludioxonil in alga
Scenedesmus obliquus. Aquat Toxicol 74:150–159
Downton WJS, Bishop DG, Larkum AWD, Osmond CB (1976) Oxygen inhibition of photosynthetic oxygen evolution in marine plants. Aust J Plant Physiol 3:73–79
Drake LA, Dobbs FC, Zimmerman RC (2003) Effects of epiphyte load on optical properties and
photosynthetic potential of the seagrasses Thalassia testudinum Banks ex König and Zostera
marina L. Limnol Oceanogr 48:456–463
P. Buapet
Collier CJ, Lavery PS, Ralph PJ, Masini RJ (2008) Physiological characteristics of the seagrass
Posidonia sinuosa along a depth-related gradient of light availability. Mar Ecol Prog Ser
353:65–79
Collier CJ, Uthicke S, Waycott M (2011) Thermal tolerance of two seagrass species at contrasting
light levels: implications for future distribution in the Great Barrier Reef. Limnol Oceanogr
56:2200–2210
Cornic G, Briantais JM (1991) Partitioning of photosynthetic electron flow between CO 2 and
O 2 reduction in a C3 leaf (Phaseolus vulgaris L.) at different CO 2 concentrations and during
drought stress. Planta 183:178–184
Cousins AB, Bloom AJ (2004) Oxygen consumption during leaf nitrate assimilation in a C3 and
C4 plant: the role of mitochondrial respiration. Plant Cell Environ 27:1537–1545
Cox TE, Gazeau F, Alliouane S, Hendriks IE, Mahacek P, Le Fur A, Gattuso J-P (2016) Effects
of in situ CO 2 enrichment on structural characteristics, photosynthesis, and growth of the
Mediterranean seagrass Posidonia oceanica. Biogeosciences 13:2179–2194
Cozza R, Pangaro T, Maestrini P, Giordani T, Natali L, Cavallini A (2006) Isolation of putative type
2 metallothionein encoding sequences and spatial expression pattern in the seagrass Posidonia
oceanica. Aquat Bot 85:317–323
Crafts-Brandner SJ, Salvucci ME (2000) Rubisco activase constrains the photosynthetic potential
of leaves at high temperature and CO 2 . Proc Natl Acad Sci U S A 97:13430–13435
Dattolo E, Gu J, Bayer PE, Mazzuca S, Serra IA, Spadafora A, Bernardo L, Natali L, Cavallini
A, Procaccini G (2013) Acclimation to different depths by the marine angiosperm Posidonia
oceanica: transcriptomic and proteomic profiles. Front Plant Sci 4:1–15
Dattolo E, Marín-Guirao L, Ruiz JM, Procaccini G (2017) Long-term acclimation to reciprocal
light conditions suggests depth-related selection in the marine foundation species Posidonia
oceanica. Ecol Evol 7:1148–1164
Dattolo E, Ruocco M, Brunet C, Lorenti M, Lauritano C, D’Esposito D, De Luca P, Sanges R,
Mazzuca S, Procaccini G (2014) Response of the seagrass Posidonia oceanica to different
light environments: insights from a combined molecular and photo-physicological study. Mar
Environ Res 101:225–236
Davey PA, Pernice M, Sablok G, Larkum A, Lee HT, Golicz A, Edwards D, Dolferus R, Ralph P
(2016) The emergence of molecular profiling and omics techniques in seagrass biology; furthering our understanding of seagrasses. Funct Integr Genomics 16:465–480
De Oliveira Dal’Molin CG, Quek LE, Palfreyman RW, Brumbley SM, Nielsen LK (2010)
AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis.
Plant Physiol 152:579–589
Deng Y, Yao J, Wang X, Guo H, Duan D (2012) Transcriptome sequencing and comparative analysis of Saccharina japonica (Laminariales, Phaeophyceae) under blue light induction. PLoS
One 7(6):e39704
Dennison WC, Alberte RS (1982) Photosynthetic response of Zostera marina L. (eelgrass) to in
situ manipulations of light intensity. Oecologia 55:137–144
Dent RM, Haglund CM, Chin BL, Kobayashi MC, Niyogi KK (2005) Functional genomics of
eukaryotic photosynthesis using insertional mutagenesis of Chlamydomonas reinhardtii. Plant
Physiol 137:545–556
Dent RM, Han M, Niyogi KK (2001) Functional genomics of plant photosynthesis in the fast lane
using Chlamydomonas reinhardtii. Trends Plant Sci 6:364–371
Dewez D, Geoffroy L, Vernet G, Popovic R (2005) Determination of photosynthetic and enzymatic biomarkers sensitivity used to evaluate toxic effects of copper and fludioxonil in alga
Scenedesmus obliquus. Aquat Toxicol 74:150–159
Downton WJS, Bishop DG, Larkum AWD, Osmond CB (1976) Oxygen inhibition of photosynthetic oxygen evolution in marine plants. Aust J Plant Physiol 3:73–79
Drake LA, Dobbs FC, Zimmerman RC (2003) Effects of epiphyte load on optical properties and
photosynthetic potential of the seagrasses Thalassia testudinum Banks ex König and Zostera
marina L. Limnol Oceanogr 48:456–463
P. Buapet