ll4
B. BERSCH et al.
laboratories. We also want to thank all those who belonged to the Laboratory of
Magnetic Resonance at the IBS during the last years and who have contributed to
this work by numerous, invaluable discussions. This is publicatoin no 612 of the
Institut de Biologie Structurale - Jean-Pierre Ebel.
References
Arlaud GJ, Colomb MG, Gagnon J (1987) A functional model of the human Cl complex. Immunol.
Today 8, lO6-ll1.
Bai Y, Sosnick TR, Mayne L, Englander SW (1995) Protein folding intermediates: native state hydrogen exchange. Science 269: 192-197.
Banci L, Gori-Savanalli G, Turano P (1997) A molecular dynamics study in explicit water of the
reduced and oxidized form of yeast iSO-I-cytochrome c. Eur J Biochem 249: 716-723.
Basus VJ (1989) Proton nuclear magnetic resonance assignments. Meth Enzymol177: 132-149.
Beger RD, Bolton PH (1997) Protein and 'Ij! dihedral restraints determined from multidimensional
hypersurface correlation of backbone chemical shifts and their use in the determination of protein
tertiary structure. J Biomol NMR lO: 129-142.
Benning MM, Wesenberg G, Caffrey MS, Bartsch RG, Meyer TE, Cusanovich MA, Rayment I, Holden
MM (1991) Molecular structure of cytochrome C2 isolated from Rhodobacter capsulatus determined
at 2.5A resolution. J Mol BioI 220: 673-685.
Bersch B, Hernandez JF, Marion D, Arlaud GJ (1998) Solution structure of the epidermal growth factor (EGF)-like module of human complement protease Clr, an atypical member of the EGF family.
Biochemistry 37: 1204-1214.
Biamonti C, Rios CB, Lyons BA, Montelione GT (1994) Multidimensional NMR experiments and analysis techniques for determining homo- and heteronuclear scalar coupling constants in proteins and
nucleic acids. Adv Biophys Chern 4: 51-120
Blackledge MJ, Medvedeva S, Poncin M, Guerlesquin F, Bruschi M, Marion D (1995) Structure and
dynamics of ferrocytochrome Cm from Desulfovibrio vulgaris studied by NMR spectroscopy and
restrained molecular dynamics. J Mol BioI 245: 661-681.
Blackledge MJ, Guerlesquin F, Marion D (1996) Comparison of low oxidoreduction potential cytochrome c553 from Desulfovibrio vulgaris with the class I cytochrome c family. Proteins: Struct
Funct Genet 24: 178-194.
Blackledge M, Cordier F, Dosset P, Marion D (1998) Precision and uncertainty in the characterization
of anisotropic rotational diffusion by 15N relaxation. J Am Chern Soc 120: 4538-4539.
Clore GM, Gronenborn AM (1998) New methods of structure refinement for macromolecular structure determination by NMR. Proc Nat! Acad Sci 95: 5891-5898.
Cordier F, Caffrey M, Brutscher B, Cusanovich M, Marion D, Blackledge M (1998) Solution structure,
rotational diffusion anisotropy and local backbone dynamics of Rhodobacter capsulatus cytochrome C2' J Mol BioI 281: 341-361.
Dzakula Z, West!er WM, Edison AS, Markley JL (1992) The "CUPID" method for calculating the continuous probability distribution of rotamers from NMR data. J Am Chern Soc 114: 6195-6199.
Englander SW, So snick TR, Englander JJ, Mayne L (1996) Mechanisms and uses of hydrogen
exchange. Curr Opin Struct BioI 6: 18-23
Folkers PJM, Folmer RHA, Konigs RNH, Hilbers CW (1993) Overcoming the ambiguity problem
encountered in the analysis of nuclear Overhauser magnetic resonance spectra of symmetric dimer
proteins. J Am Chern Soc ll5: 3798-3799.
Garcia de la Torre JG, Bloomfield VA (1981) Hydrodynamic properties of complex, rigid, biological
macromolecules: theory and applications. Q Rev Biophys 14: 81-139.
Garrett DS, Kuszewski J, Hancock T, Lodi pJ, Vuister GW, Gronenborn AM, Clore GM (1994) The
impact of direct refinement against three-bond HN-C a coupling constants on protein structure
determinaton by NMR. J Magn Reson lO4: 99-lO3.
Gooley PR, MacKenzie NE (1990) Pro-Ala-35 Rhodobacter capsulatus cytochrome C2 shows dynamic
not structural differences. A lH and 15N NMR study. FEBS Lett 260: 225-288.
Handel TM, Domaille PJ (1996) Heteronuclear eH, l3C, 15N) NMR assignments and solution structure
of the monocyte chemoattractant protein-l (MCP-I) dimer. Biochemistry 35: 6569-6584.
Handford P, Downing AK, Rao Z, Hewett DR, Sykes BC, Kielty CM (1995). The calcium binding properties and molecular organization of epidermal growth factor-like domains in human fibrillin 1. J
Bioi Chern 270: 6751-6756.
Hansen MR, Mueller L, Pardi A (1998) Tunable alignment of macromolecules by filamentous phage
yields dipolar coupling interactions. Nat Struct BioI 5: 1065-lO74.
B. BERSCH et al.
laboratories. We also want to thank all those who belonged to the Laboratory of
Magnetic Resonance at the IBS during the last years and who have contributed to
this work by numerous, invaluable discussions. This is publicatoin no 612 of the
Institut de Biologie Structurale - Jean-Pierre Ebel.
References
Arlaud GJ, Colomb MG, Gagnon J (1987) A functional model of the human Cl complex. Immunol.
Today 8, lO6-ll1.
Bai Y, Sosnick TR, Mayne L, Englander SW (1995) Protein folding intermediates: native state hydrogen exchange. Science 269: 192-197.
Banci L, Gori-Savanalli G, Turano P (1997) A molecular dynamics study in explicit water of the
reduced and oxidized form of yeast iSO-I-cytochrome c. Eur J Biochem 249: 716-723.
Basus VJ (1989) Proton nuclear magnetic resonance assignments. Meth Enzymol177: 132-149.
Beger RD, Bolton PH (1997) Protein
hypersurface correlation of backbone chemical shifts and their use in the determination of protein
tertiary structure. J Biomol NMR lO: 129-142.
Benning MM, Wesenberg G, Caffrey MS, Bartsch RG, Meyer TE, Cusanovich MA, Rayment I, Holden
MM (1991) Molecular structure of cytochrome C2 isolated from Rhodobacter capsulatus determined
at 2.5A resolution. J Mol BioI 220: 673-685.
Bersch B, Hernandez JF, Marion D, Arlaud GJ (1998) Solution structure of the epidermal growth factor (EGF)-like module of human complement protease Clr, an atypical member of the EGF family.
Biochemistry 37: 1204-1214.
Biamonti C, Rios CB, Lyons BA, Montelione GT (1994) Multidimensional NMR experiments and analysis techniques for determining homo- and heteronuclear scalar coupling constants in proteins and
nucleic acids. Adv Biophys Chern 4: 51-120
Blackledge MJ, Medvedeva S, Poncin M, Guerlesquin F, Bruschi M, Marion D (1995) Structure and
dynamics of ferrocytochrome Cm from Desulfovibrio vulgaris studied by NMR spectroscopy and
restrained molecular dynamics. J Mol BioI 245: 661-681.
Blackledge MJ, Guerlesquin F, Marion D (1996) Comparison of low oxidoreduction potential cytochrome c553 from Desulfovibrio vulgaris with the class I cytochrome c family. Proteins: Struct
Funct Genet 24: 178-194.
Blackledge M, Cordier F, Dosset P, Marion D (1998) Precision and uncertainty in the characterization
of anisotropic rotational diffusion by 15N relaxation. J Am Chern Soc 120: 4538-4539.
Clore GM, Gronenborn AM (1998) New methods of structure refinement for macromolecular structure determination by NMR. Proc Nat! Acad Sci 95: 5891-5898.
Cordier F, Caffrey M, Brutscher B, Cusanovich M, Marion D, Blackledge M (1998) Solution structure,
rotational diffusion anisotropy and local backbone dynamics of Rhodobacter capsulatus cytochrome C2' J Mol BioI 281: 341-361.
Dzakula Z, West!er WM, Edison AS, Markley JL (1992) The "CUPID" method for calculating the continuous probability distribution of rotamers from NMR data. J Am Chern Soc 114: 6195-6199.
Englander SW, So snick TR, Englander JJ, Mayne L (1996) Mechanisms and uses of hydrogen
exchange. Curr Opin Struct BioI 6: 18-23
Folkers PJM, Folmer RHA, Konigs RNH, Hilbers CW (1993) Overcoming the ambiguity problem
encountered in the analysis of nuclear Overhauser magnetic resonance spectra of symmetric dimer
proteins. J Am Chern Soc ll5: 3798-3799.
Garcia de la Torre JG, Bloomfield VA (1981) Hydrodynamic properties of complex, rigid, biological
macromolecules: theory and applications. Q Rev Biophys 14: 81-139.
Garrett DS, Kuszewski J, Hancock T, Lodi pJ, Vuister GW, Gronenborn AM, Clore GM (1994) The
impact of direct refinement against three-bond HN-C a coupling constants on protein structure
determinaton by NMR. J Magn Reson lO4: 99-lO3.
Gooley PR, MacKenzie NE (1990) Pro-Ala-35 Rhodobacter capsulatus cytochrome C2 shows dynamic
not structural differences. A lH and 15N NMR study. FEBS Lett 260: 225-288.
Handel TM, Domaille PJ (1996) Heteronuclear eH, l3C, 15N) NMR assignments and solution structure
of the monocyte chemoattractant protein-l (MCP-I) dimer. Biochemistry 35: 6569-6584.
Handford P, Downing AK, Rao Z, Hewett DR, Sykes BC, Kielty CM (1995). The calcium binding properties and molecular organization of epidermal growth factor-like domains in human fibrillin 1. J
Bioi Chern 270: 6751-6756.
Hansen MR, Mueller L, Pardi A (1998) Tunable alignment of macromolecules by filamentous phage
yields dipolar coupling interactions. Nat Struct BioI 5: 1065-lO74.