292 Marine Macro- and Microalgae: An Overview
Bonacci, W., P.K. Teng, B. Afonso, H. Niederholtmeyer, P. Grob, P.A. Silver and D.F. Savage. 2012. Modularity of a carbonfixing protein organelle. Proc. Natl. Acad. Sci. USA 109: 478–483.
Boyle, N.R., M.D. Page, B. Liu, I.K. Blaby, D. Casero, J. Kropat, S.J. Cokus, A. Hong-Hermesdorf, J. Shaw, S.J. Karpowicz,
S.D. Gallaher, S. Johnson, C. Benning, M. Pellegrini, A. Grossman and S.S. Merchant. 2012. Three acyltransferases
and nitrogen-responsive regulator are implicated in nitrogen starvation-induced triacylglycerol accumulation in
Chlamydomonas. J. Biol. Chem. 287: 15811–15825.
Boynton, J.E., N.W. Gillham, E.H. Harris, J.P. Hosler, A.M. Johnson, A.R. Jones, B.L. Randolph-Anderson, D. Robertson,
T.M. Klein, K.B. Shark and J.C. Sanford. 1988. Chloroplast transformation in Chlamydomonas with high velocity
microprojectiles. Science 240: 1534–1538.
Bowler, C., A.E. Allen, J.H. Badger, J. Grimwood, K. Jabbari, A. Kuo, U. Maheswari, C. Martens, F. Maumus, R.P. Otillar,
E. Rayko, A. Salamov, K. Vandepoele, B. Beszteri, A. Gruber, M. Heijde, M. Katinka, T. Mock, K. Valentin, F. Verret,
J.A. Berges, C. Brownlee, J.P. Cadoret, A. Chiovitti, C.J. Choi, S. Coesel, A. De Martino, J.C. Detter, C. Durkin,
A. Falciatore, J. Fournet, M. Haruta, M.J. Huysman, B.D. Jenkins, K. Jiroutova, R.E. Jorgensen, Y. Joubert, A. Kaplan,
N. Kröger, P.G. Kroth, J. La Roche, E. Lindquist, M. Lommer, V. Martin-Jézéquel, P.J. Lopez, S. Lucas, M. Mangogna,
K. McGinnis, L.K. Medlin, A. Montsant, M.P. Oudot-Le Secq, C. Napoli, M. Obornik, M.S. Parker, J.L. Petit,
B.M. Porcel, N. Poulsen, M. Robison, L. Rychlewski, T.A. Rynearson, J. Schmutz, H. Shapiro, M. Siaut, M. Stanley,
M.R. Sussman, A.R. Taylor, A. Vardi, P. von Dassow, W. Vyverman, A. Willis, L.S. Wyrwicz, D.S. Rokhsar, J. Weissenbach,
E.V. Armbrust, B.R. Green, Y. Van de Peer and I.V. Grigoriev. 2008. The Phaeodactylum genome reveals the evolutionary
history of diatom genomes. Nature 456: 239–244.
Brodie, J., C.X. Chan, O. De Clerck, J.M. Cock, S.M. Coelho, C. Gachon, A.R. Grossman, T. Mock, J.A. Raven, A.G. Smith,
H.S. Yoon and D. Bhattacharya. 2017. The algal revolution. Trends Plant Sci. 22: 726–738.
Burgess, S.J., B. Tamburic, F. Zemichael, K. Hellgardt and P.J. Nixon. 2011. Solar-driven hydrogen production in green algae.
Adv. Appl. Microbiol. 75: 71–110.
Burgess, S.J., G. Tredwell, A. Molnar, J.G. Bundy and P.J. Nixon. 2012. Artificial microRNA-mediated knockdown of
pyruvate formate lyase (PFL1) provides evidence for an active 3-hydroxybutyrate production pathway in the green alga
Chlamydomonas reinhardtii. J. Biotechnol. 162: 57–66.
Cha, T.S., C.F. Chen, W. Yee, A. Aziz and S.H. Loh. 2011. Cinnamic acid, coumarin and vanillin: alternative phenolic
compounds for efficient Agrobacterium-mediated transformation of the unicellular green alga, Nannochloropsis sp. J.
Microbiol. Methods 84: 430–434.
Cha, T.S., W. Yee and A. Aziz. 2012. Assessment of factors affecting Agrobacterium-mediated genetic transformation of the
unicellular green alga, Chlorella vulgaris. World J. Microbiol. Biotechnol. 28: 1771–1779.
Chen, H.C., A.J. Newton and A. Melis. 2005. Role of SulP, a nuclear-encoded chloroplast sulfate permease, in sulfate transport
and H 2 evolution in Chlamydomonas reinhardtii. Photosynth. Res. 84: 289–296.
Chen, M., M. Schliep, R.D. Wllows, Z.L. Cai, B.A. Neilan and H. Scheer. 2010. A red-shifted chlorophyll. Science 329:
1318–1319.
Chen, M. and R.E. Blankenship. 2011. Expanding the solar spectrum used by photosynthesis. Trends Plant. Sci. 16: 427–431.
Chen, Y., Y. Wang, Y. Sun, L. Zhang and W. Li. 2001. Highly efficient expression of rabbit neutrophil peptide-1 gene in
Chlorella ellipsoidea cells. Curr. Genet. 39: 365–370.
Cheney, D., B. Metz and J. Stiller. 2001. Agrobacterium-mediated genetic transformation in the macroscopic marine red alga
Porphyra yezoensis. J. Phycol. 37(Suppl.): 11.
Chochois, V., D. Dauvillee, A. Beyly, D. Tolleter, S. Cuine, H. Timpano, S. Ball, L. Cournac and G. Peltier. 2009. Hydrogen
production in Chlamydomonas: photosystem II-dependent and -independent pathways differ in their requirement for
starch metabolism. Plant Physiol. 151: 631–640.
Chochois, V., S. Constans, D. Dauvillee, A. Beyly, M. Soliveres, S. Ball, G. Peltier and L. Cournac. 2010. Relationships
between PSII-independent hydrogen bioproduction and starch metabolism as evidenced from isolation of starch catabolism
mutants in the green alga Chlamydomonas reinhardtii. Int. J. Hydrogen Energy 35: 10731–10740.
Day, J.G., S.P. Slocombe and M.S. Stanley. 2012. Overcoming biological constraints to enable the exploitation of microalgae
for biofuels. Biores. Technol. 109: 245–251.
Dawson, H.N., R. Burlingame and A.C. Cannons. 1997. Stable transformation of Chlorella: rescue of nitrate reductase-deficient
mutants with the nitrate reductase gene. Curr. Microbiol. 35: 356–362.
Deng, M.D. and J.R. Coleman. 1999. Ethanol synthesis by genetic engineering in cyanobacteria. Appl. Environ. Microbiol.
65: 523–528.
Doebbe, A., J. Rupprecht, J. Beckmann, J.H. Mussgnug, A. Hallmann, B. Hankamer and O. Kruse. 2007. Functional
integration of the HUP1 hexose symporter gene into the genome of C. reinhardtii: Impacts on biological H 2 production.
J. Biotechnol. 131: 27–33.
Doebbe, A., M. Keck, R.M. La, J.H. Mussgnug, B. Hankamer, E. Tekce, K. Niehaus and O. Kruse. 2010. The interplay of
proton, electron, and metabolite supply for photosynthetic H 2 production in Chlamydomonas reinhardtii. J. Biol. Chem.
285: 30247–30260.
Dubini, A. and M.L. Ghirardi. 2015. Engineering photosynthetic organisms for the production of biohydrogen. Photosynth.
Res. 123: 241–253.
Dunahay, T.G., E.E. Jarvis and P.G. Roessler. 1995. Genetic transformation of the diatoms Cyclotella cryptica and Navicula
saprophila. J. Phycol. 31: 1004–1011.
Bonacci, W., P.K. Teng, B. Afonso, H. Niederholtmeyer, P. Grob, P.A. Silver and D.F. Savage. 2012. Modularity of a carbonfixing protein organelle. Proc. Natl. Acad. Sci. USA 109: 478–483.
Boyle, N.R., M.D. Page, B. Liu, I.K. Blaby, D. Casero, J. Kropat, S.J. Cokus, A. Hong-Hermesdorf, J. Shaw, S.J. Karpowicz,
S.D. Gallaher, S. Johnson, C. Benning, M. Pellegrini, A. Grossman and S.S. Merchant. 2012. Three acyltransferases
and nitrogen-responsive regulator are implicated in nitrogen starvation-induced triacylglycerol accumulation in
Chlamydomonas. J. Biol. Chem. 287: 15811–15825.
Boynton, J.E., N.W. Gillham, E.H. Harris, J.P. Hosler, A.M. Johnson, A.R. Jones, B.L. Randolph-Anderson, D. Robertson,
T.M. Klein, K.B. Shark and J.C. Sanford. 1988. Chloroplast transformation in Chlamydomonas with high velocity
microprojectiles. Science 240: 1534–1538.
Bowler, C., A.E. Allen, J.H. Badger, J. Grimwood, K. Jabbari, A. Kuo, U. Maheswari, C. Martens, F. Maumus, R.P. Otillar,
E. Rayko, A. Salamov, K. Vandepoele, B. Beszteri, A. Gruber, M. Heijde, M. Katinka, T. Mock, K. Valentin, F. Verret,
J.A. Berges, C. Brownlee, J.P. Cadoret, A. Chiovitti, C.J. Choi, S. Coesel, A. De Martino, J.C. Detter, C. Durkin,
A. Falciatore, J. Fournet, M. Haruta, M.J. Huysman, B.D. Jenkins, K. Jiroutova, R.E. Jorgensen, Y. Joubert, A. Kaplan,
N. Kröger, P.G. Kroth, J. La Roche, E. Lindquist, M. Lommer, V. Martin-Jézéquel, P.J. Lopez, S. Lucas, M. Mangogna,
K. McGinnis, L.K. Medlin, A. Montsant, M.P. Oudot-Le Secq, C. Napoli, M. Obornik, M.S. Parker, J.L. Petit,
B.M. Porcel, N. Poulsen, M. Robison, L. Rychlewski, T.A. Rynearson, J. Schmutz, H. Shapiro, M. Siaut, M. Stanley,
M.R. Sussman, A.R. Taylor, A. Vardi, P. von Dassow, W. Vyverman, A. Willis, L.S. Wyrwicz, D.S. Rokhsar, J. Weissenbach,
E.V. Armbrust, B.R. Green, Y. Van de Peer and I.V. Grigoriev. 2008. The Phaeodactylum genome reveals the evolutionary
history of diatom genomes. Nature 456: 239–244.
Brodie, J., C.X. Chan, O. De Clerck, J.M. Cock, S.M. Coelho, C. Gachon, A.R. Grossman, T. Mock, J.A. Raven, A.G. Smith,
H.S. Yoon and D. Bhattacharya. 2017. The algal revolution. Trends Plant Sci. 22: 726–738.
Burgess, S.J., B. Tamburic, F. Zemichael, K. Hellgardt and P.J. Nixon. 2011. Solar-driven hydrogen production in green algae.
Adv. Appl. Microbiol. 75: 71–110.
Burgess, S.J., G. Tredwell, A. Molnar, J.G. Bundy and P.J. Nixon. 2012. Artificial microRNA-mediated knockdown of
pyruvate formate lyase (PFL1) provides evidence for an active 3-hydroxybutyrate production pathway in the green alga
Chlamydomonas reinhardtii. J. Biotechnol. 162: 57–66.
Cha, T.S., C.F. Chen, W. Yee, A. Aziz and S.H. Loh. 2011. Cinnamic acid, coumarin and vanillin: alternative phenolic
compounds for efficient Agrobacterium-mediated transformation of the unicellular green alga, Nannochloropsis sp. J.
Microbiol. Methods 84: 430–434.
Cha, T.S., W. Yee and A. Aziz. 2012. Assessment of factors affecting Agrobacterium-mediated genetic transformation of the
unicellular green alga, Chlorella vulgaris. World J. Microbiol. Biotechnol. 28: 1771–1779.
Chen, H.C., A.J. Newton and A. Melis. 2005. Role of SulP, a nuclear-encoded chloroplast sulfate permease, in sulfate transport
and H 2 evolution in Chlamydomonas reinhardtii. Photosynth. Res. 84: 289–296.
Chen, M., M. Schliep, R.D. Wllows, Z.L. Cai, B.A. Neilan and H. Scheer. 2010. A red-shifted chlorophyll. Science 329:
1318–1319.
Chen, M. and R.E. Blankenship. 2011. Expanding the solar spectrum used by photosynthesis. Trends Plant. Sci. 16: 427–431.
Chen, Y., Y. Wang, Y. Sun, L. Zhang and W. Li. 2001. Highly efficient expression of rabbit neutrophil peptide-1 gene in
Chlorella ellipsoidea cells. Curr. Genet. 39: 365–370.
Cheney, D., B. Metz and J. Stiller. 2001. Agrobacterium-mediated genetic transformation in the macroscopic marine red alga
Porphyra yezoensis. J. Phycol. 37(Suppl.): 11.
Chochois, V., D. Dauvillee, A. Beyly, D. Tolleter, S. Cuine, H. Timpano, S. Ball, L. Cournac and G. Peltier. 2009. Hydrogen
production in Chlamydomonas: photosystem II-dependent and -independent pathways differ in their requirement for
starch metabolism. Plant Physiol. 151: 631–640.
Chochois, V., S. Constans, D. Dauvillee, A. Beyly, M. Soliveres, S. Ball, G. Peltier and L. Cournac. 2010. Relationships
between PSII-independent hydrogen bioproduction and starch metabolism as evidenced from isolation of starch catabolism
mutants in the green alga Chlamydomonas reinhardtii. Int. J. Hydrogen Energy 35: 10731–10740.
Day, J.G., S.P. Slocombe and M.S. Stanley. 2012. Overcoming biological constraints to enable the exploitation of microalgae
for biofuels. Biores. Technol. 109: 245–251.
Dawson, H.N., R. Burlingame and A.C. Cannons. 1997. Stable transformation of Chlorella: rescue of nitrate reductase-deficient
mutants with the nitrate reductase gene. Curr. Microbiol. 35: 356–362.
Deng, M.D. and J.R. Coleman. 1999. Ethanol synthesis by genetic engineering in cyanobacteria. Appl. Environ. Microbiol.
65: 523–528.
Doebbe, A., J. Rupprecht, J. Beckmann, J.H. Mussgnug, A. Hallmann, B. Hankamer and O. Kruse. 2007. Functional
integration of the HUP1 hexose symporter gene into the genome of C. reinhardtii: Impacts on biological H 2 production.
J. Biotechnol. 131: 27–33.
Doebbe, A., M. Keck, R.M. La, J.H. Mussgnug, B. Hankamer, E. Tekce, K. Niehaus and O. Kruse. 2010. The interplay of
proton, electron, and metabolite supply for photosynthetic H 2 production in Chlamydomonas reinhardtii. J. Biol. Chem.
285: 30247–30260.
Dubini, A. and M.L. Ghirardi. 2015. Engineering photosynthetic organisms for the production of biohydrogen. Photosynth.
Res. 123: 241–253.
Dunahay, T.G., E.E. Jarvis and P.G. Roessler. 1995. Genetic transformation of the diatoms Cyclotella cryptica and Navicula
saprophila. J. Phycol. 31: 1004–1011.