Biomineral, 237
BIOMOC, 175
Biopiles, 160
Bioplastic, 138, 165, 327–330
Biopolymers, 114, 125, 126, 129, 140, 312, 314
Bioprospecting, 23
Bio-refineries, 145, 147
Biorefinery, 22, 84, 100, 139, 147, 148
Biosensor, 107, 197–205
Bioslurping, 159
Biosparging, 159
Biosurfactant, 114, 124, 125, 128, 163, 174
BioSurfDb, 174
Biotransformationis, 347, 354
Bioventing, 159
β-ketoadipate pathway, 92, 93, 98, 172
C
Calvin cycle, 238, 239, 243, 244
Carbamazepine, 282
Carbon concentration mechanism, 241–242
Carbon dioxide (CO 2 ), 3, 4, 8, 12–19, 21, 24,
32–34, 36, 37, 50, 51, 56, 58, 66, 106–
108, 118, 119, 123–125, 128, 141, 147,
165, 166, 202–203, 235–247, 274, 276,
314, 315, 325, 326
emitters, 315
sensor, 202–203
Carbonic anhydrase, 11, 242–243, 247
Carboxysome, 241–247
Carcinogen, 23, 139, 161, 212, 213, 215–218,
220, 222, 226, 227, 258, 294, 305
Catabolic pathways, 90–92
Catalase-peroxidases, 97
Cellobiohydrolases, 70, 71
Cellulases, 69, 71
Cellulose based paper, 314
Cellulosic sugars, 69, 70
Cellulosome, 71, 72, 77
Chemical additives, 319
Chemical EOR, 114, 124
Chemical flocculation, 10
Chemical sensor, 204
Chemolitho autotrophic, 236
Chitosan, 147, 314, 321
Chitosan coatings, 321
Ciprofloxacin, 282, 283
Cis-dihydrodiol dehydrogenases, 300
Clostridium, 35, 47, 51–53, 67, 71, 73, 77, 165,
166, 196, 313
Co-digestion, 13, 44, 48
Combustion, 13, 17, 23, 34, 124, 236, 293, 295
Community genomics, 163
Composting, 160–161
CO2 sequestration, 166, 246
Cosmetic products, 143
CRAFT, 175
CYP gene superfamily, 217
Cytotoxic, 257, 268
D
Degradation, 41, 44, 46, 47, 50, 52, 53, 69, 73,
77, 83–100, 118, 124, 129, 157, 159,
161–163, 169, 172–175, 267–284, 294,
296–302, 329
Dehalogenation, 341
Dehydrogenases, 97–98
Denaturing gradient gel electrophoresis
(DGGE), 189, 191–192
Deoxyribonucleic acid (DNA) sequencing, 191,
193–194
Deoxyribonucleotide triphosphates (dNTPs),
188, 190
Depolymerization, 83–100
Desulfuration, 340
Detoxication mechanism, 339
Diarylpropane, 91–92
Dibenzofuran 4,4a-dioxygenase, 302, 303
Dibenzo-p-dioxins (DD), 294, 298–300, 304
Dicarboxylate–hydroxybutyrate cycle, 239, 242
2,6-dichoroindophenol, 325
Diclofenac, 278, 281, 282
Dioxins, 293–305
Dioxygenases, 92, 93, 297, 300–304
Diseases, 18, 21, 33, 34, 42, 157, 176, 186, 190,
196, 215, 223, 224, 228, 253, 257, 338,
355
Disulfide reduction, 341
Dry digester, 41
DyP-type peroxidases, 94
E
EAWAG-BBD, 175
Ecological genomics, 163
Electrochemical biosensors, 198–199, 204
Electroflocculation, 10
Embryonic stem cell, 257–260
Embryotoxicity, 257–259
Energy, 4, 5, 8, 9, 11, 13–15, 17, 20, 22–24,
32–34, 40, 42, 44, 53, 54, 57–59, 66, 76,
84, 88, 115, 118, 125, 127, 136–138,
144, 145, 148, 237, 269, 299, 342, 346
Enhanced oil recovery (EOR), 114, 124–126
360
Index
BIOMOC, 175
Biopiles, 160
Bioplastic, 138, 165, 327–330
Biopolymers, 114, 125, 126, 129, 140, 312, 314
Bioprospecting, 23
Bio-refineries, 145, 147
Biorefinery, 22, 84, 100, 139, 147, 148
Biosensor, 107, 197–205
Bioslurping, 159
Biosparging, 159
Biosurfactant, 114, 124, 125, 128, 163, 174
BioSurfDb, 174
Biotransformationis, 347, 354
Bioventing, 159
β-ketoadipate pathway, 92, 93, 98, 172
C
Calvin cycle, 238, 239, 243, 244
Carbamazepine, 282
Carbon concentration mechanism, 241–242
Carbon dioxide (CO 2 ), 3, 4, 8, 12–19, 21, 24,
32–34, 36, 37, 50, 51, 56, 58, 66, 106–
108, 118, 119, 123–125, 128, 141, 147,
165, 166, 202–203, 235–247, 274, 276,
314, 315, 325, 326
emitters, 315
sensor, 202–203
Carbonic anhydrase, 11, 242–243, 247
Carboxysome, 241–247
Carcinogen, 23, 139, 161, 212, 213, 215–218,
220, 222, 226, 227, 258, 294, 305
Catabolic pathways, 90–92
Catalase-peroxidases, 97
Cellobiohydrolases, 70, 71
Cellulases, 69, 71
Cellulose based paper, 314
Cellulosic sugars, 69, 70
Cellulosome, 71, 72, 77
Chemical additives, 319
Chemical EOR, 114, 124
Chemical flocculation, 10
Chemical sensor, 204
Chemolitho autotrophic, 236
Chitosan, 147, 314, 321
Chitosan coatings, 321
Ciprofloxacin, 282, 283
Cis-dihydrodiol dehydrogenases, 300
Clostridium, 35, 47, 51–53, 67, 71, 73, 77, 165,
166, 196, 313
Co-digestion, 13, 44, 48
Combustion, 13, 17, 23, 34, 124, 236, 293, 295
Community genomics, 163
Composting, 160–161
CO2 sequestration, 166, 246
Cosmetic products, 143
CRAFT, 175
CYP gene superfamily, 217
Cytotoxic, 257, 268
D
Degradation, 41, 44, 46, 47, 50, 52, 53, 69, 73,
77, 83–100, 118, 124, 129, 157, 159,
161–163, 169, 172–175, 267–284, 294,
296–302, 329
Dehalogenation, 341
Dehydrogenases, 97–98
Denaturing gradient gel electrophoresis
(DGGE), 189, 191–192
Deoxyribonucleic acid (DNA) sequencing, 191,
193–194
Deoxyribonucleotide triphosphates (dNTPs),
188, 190
Depolymerization, 83–100
Desulfuration, 340
Detoxication mechanism, 339
Diarylpropane, 91–92
Dibenzofuran 4,4a-dioxygenase, 302, 303
Dibenzo-p-dioxins (DD), 294, 298–300, 304
Dicarboxylate–hydroxybutyrate cycle, 239, 242
2,6-dichoroindophenol, 325
Diclofenac, 278, 281, 282
Dioxins, 293–305
Dioxygenases, 92, 93, 297, 300–304
Diseases, 18, 21, 33, 34, 42, 157, 176, 186, 190,
196, 215, 223, 224, 228, 253, 257, 338,
355
Disulfide reduction, 341
Dry digester, 41
DyP-type peroxidases, 94
E
EAWAG-BBD, 175
Ecological genomics, 163
Electrochemical biosensors, 198–199, 204
Electroflocculation, 10
Embryonic stem cell, 257–260
Embryotoxicity, 257–259
Energy, 4, 5, 8, 9, 11, 13–15, 17, 20, 22–24,
32–34, 40, 42, 44, 53, 54, 57–59, 66, 76,
84, 88, 115, 118, 125, 127, 136–138,
144, 145, 148, 237, 269, 299, 342, 346
Enhanced oil recovery (EOR), 114, 124–126
360
Index