Genetic potential, 403
Genome, 403
Genome annotation, 251
Genome instability, 109
Genome integrity, 105, 109, 110
Genome mining, 282
Genome stability, 110
Genomics, 207, 281–283
Geodin, 253
GH6, 381
GH7, 381
Gliotoxin, 270, 284
Global regulators, 269–270
Global transcription machinery engineering
(gTME), 353
Glomeromycotina, 143
Glucuronidase, 380
Glycoengineering, 329
Glycolysis, 344, 346
Glycopeptides, 376
Glycoside hydrolase (GH), 378, 381
Glycosyl hydrolase (GH), 373
Glycosylation, 246–247, 329
G-protein-coupled receptors, 179, 270
H
ɣH2A, 13
H2A.Z, 4
Hac1, 50–55, 247
Halimid, 405
Hemicellulose, 369, 372, 374, 380, 386, 389
HET domain, 125
Heterochromatin, 3, 107, 108, 112, 116
Heterokaryon incompatibility, 124
Heterologous expression, 228, 271–272, 276
Heterologous protein production, 244
Hi-C, 14
High-throughput screening, 354–356
Histone, 3
Histone deacetylase, 12
Histone methyltransferases, 8
Histone modifications, 178, 183, 187–189
Holobiont, 402
Holocellulose, 370, 374, 375, 380, 390
Homokaryotic, 145
Homologous recombination (HR), 230
Horizontal gene transfer, 419, 421, 428
Host-induced gene silencing (HIGS), 148
Heterochromatin protein one, 12
Hydrogen peroxide, 377
Hydrogenosomes, 418, 420, 426
Hydroquinone, 377
Hydroxyl radicals, 373, 374, 376–378
Hyphae, 369
Hyphal tip, 247
Hyphopodium, 153
Hypoxia, 49
I
Illumina, 208, 215
Immune system, 111, 117
Immunity, 116, 117
Indole alkaloids, 176, 177
Inducible promoter, 273
Industrial enzymes, 328, 331–333
Insulin, 329–332
Interaction, 401
InterPro, 211
Intrinsically disordered protein (IDP), 86
Intron splicing, 251
Introns, 233
Ire1, 50
Iron, 376–379
Isocyanides, 177
Iterative engineering, 237–238
J
Joint Genome Institute, 207, 209–211, 213
K
KEGG (Kyoto Encyclopedia of Genes and Genomes), 211
Kex2, 245
Kinases, 50, 79, 89
L
Laccases, 378, 381–383, 385, 389, 390, 406
Lactic acid, 322, 323
laeA, 269
laeB, 270
Leaf cutter ants-associated fungi, 281
Legumes, 151
LexA, 241
Life cycle, 414, 415, 429
Light, 297
blue, 301, 312
intensity, 308
448
Subject Index
Genome, 403
Genome annotation, 251
Genome instability, 109
Genome integrity, 105, 109, 110
Genome mining, 282
Genome stability, 110
Genomics, 207, 281–283
Geodin, 253
GH6, 381
GH7, 381
Gliotoxin, 270, 284
Global regulators, 269–270
Global transcription machinery engineering
(gTME), 353
Glomeromycotina, 143
Glucuronidase, 380
Glycoengineering, 329
Glycolysis, 344, 346
Glycopeptides, 376
Glycoside hydrolase (GH), 378, 381
Glycosyl hydrolase (GH), 373
Glycosylation, 246–247, 329
G-protein-coupled receptors, 179, 270
H
ɣH2A, 13
H2A.Z, 4
Hac1, 50–55, 247
Halimid, 405
Hemicellulose, 369, 372, 374, 380, 386, 389
HET domain, 125
Heterochromatin, 3, 107, 108, 112, 116
Heterokaryon incompatibility, 124
Heterologous expression, 228, 271–272, 276
Heterologous protein production, 244
Hi-C, 14
High-throughput screening, 354–356
Histone, 3
Histone deacetylase, 12
Histone methyltransferases, 8
Histone modifications, 178, 183, 187–189
Holobiont, 402
Holocellulose, 370, 374, 375, 380, 390
Homokaryotic, 145
Homologous recombination (HR), 230
Horizontal gene transfer, 419, 421, 428
Host-induced gene silencing (HIGS), 148
Heterochromatin protein one, 12
Hydrogen peroxide, 377
Hydrogenosomes, 418, 420, 426
Hydroquinone, 377
Hydroxyl radicals, 373, 374, 376–378
Hyphae, 369
Hyphal tip, 247
Hyphopodium, 153
Hypoxia, 49
I
Illumina, 208, 215
Immune system, 111, 117
Immunity, 116, 117
Indole alkaloids, 176, 177
Inducible promoter, 273
Industrial enzymes, 328, 331–333
Insulin, 329–332
Interaction, 401
InterPro, 211
Intrinsically disordered protein (IDP), 86
Intron splicing, 251
Introns, 233
Ire1, 50
Iron, 376–379
Isocyanides, 177
Iterative engineering, 237–238
J
Joint Genome Institute, 207, 209–211, 213
K
KEGG (Kyoto Encyclopedia of Genes and Genomes), 211
Kex2, 245
Kinases, 50, 79, 89
L
Laccases, 378, 381–383, 385, 389, 390, 406
Lactic acid, 322, 323
laeA, 269
laeB, 270
Leaf cutter ants-associated fungi, 281
Legumes, 151
LexA, 241
Life cycle, 414, 415, 429
Light, 297
blue, 301, 312
intensity, 308
448
Subject Index