Bioaugmentation, 425, 426
Bio-blocks, 298, 306, 312
Bio-brick, 229, 233
Bioethanol production, 424–425
Biofuel, 320, 322
Biogas production, 425–427
Bioluminescence, 302
Biomass, 372, 389–391
Biopharmaceutical, 328–331, 333
Bioprocess, 325, 330–332
Biopulping, 382, 389
Biorefinery, 382, 384, 386, 389, 390
Biosensor, 340, 347, 354–356, 360
Biosynthetic gene cluster (BGC), 249
Biotechnological applications, 389–391
Biotechnology, 49
BipA, 247
Bipartite gene-targeting, 231
Blast, 211, 212
Bleached, 379, 380, 389
Blue stain, 387
Blumenols, 158
Bordered pits, 370, 371, 373
Bore holes, 371, 386, 387
BROAD Institute, 207
Brown rots, 369–371, 375, 376, 378, 389, 391
Butanol, 322
C
Cand1/A, 192
Carbohydrate-active enzymes, 213–214
Carbon catabolite repression, 92, 421
Cargo-receptors, 247
Carminic acid, 254
Carotenoids, 324–326
Carrier protein, 245
Casein Kinase-1a (CK-1a), 79, 89
Catalytic, 373–378, 387
Cavity-formation, 384, 385
CAZy, 211
CAZy database, 213
CAZymes, 67, 373, 376, 378, 381, 385, 390, 391,
418, 419, 421–423
Cellobiohydrolases (CBH), 378, 380, 381
Cellobiose dehydrogenases, 376, 378, 380
Cellulase, 66, 373, 376, 381, 385, 390, 405
Cellulose, 369, 371–374, 376–378, 380–382, 384,
385, 388, 389, 391
Cellulose binding module, 381
Cellulosomes, 418–420
Cell wall, 154
Cell wall integrity pathway, 64–65, 270
Centromeres, 109, 110, 112
Chain length, 340, 347–351, 353, 357, 358, 360
Chelator-mediated Fenton (CMF), 373–375,
377, 378, 390, 391
Chemical cycling, 401
Chemical modification, 272
Chemical sensing, 179
Chitin-triggered immunity, 152
Chito-oligosaccharides, 151
Chromated copper arsenate (CCA), 384
Chromatin, 3
Chromatin remodelers, 85
Chromatin remodeling enzymes, 6
Chromosomal integration, 230
Circadian rhythms, 77
Citric acid, 323, 332
Citrinin, 253
Clock-ATPase, 6
Clock Box (c-box), 85
Clock-controlled genes (ccgs), 84, 91
CLOCKSWITCH, 6
Clonality, 145
Cloned, 383, 390
Co-cultivation, 276–280
Codon optimization, 234
Cofactor, 340–344, 346, 347, 350, 357
ATP, 340, 342–347, 350–353
NADH, 341, 343–347, 350
NADP, 341, 344–346
NADPH, 341, 343–348, 350, 354, 357
Combinatorial synthetic biology, 273–274
Compatible solutes, 406
Compensation, 78
Confocal microscopy, 144
Conidial Separation Protein 1 (CSP-1), 83
Conservation, 403
Constitutive heterochromatin, 12
Constitutive promoter, 271
COP9 signalosome (CSN), 190–193
Core clock, 79
Co-suppression, 105, 109
CRISPR/Cas9, 214, 216, 274–275, 302, 307
Cryptochromes, 181, 182, 301
Crystalline cellulose, 380, 381, 388
Cultivation, 402–403
Cultivation conditions, 407
Cultured diversity, 402
446
Subject Index
Bio-blocks, 298, 306, 312
Bio-brick, 229, 233
Bioethanol production, 424–425
Biofuel, 320, 322
Biogas production, 425–427
Bioluminescence, 302
Biomass, 372, 389–391
Biopharmaceutical, 328–331, 333
Bioprocess, 325, 330–332
Biopulping, 382, 389
Biorefinery, 382, 384, 386, 389, 390
Biosensor, 340, 347, 354–356, 360
Biosynthetic gene cluster (BGC), 249
Biotechnological applications, 389–391
Biotechnology, 49
BipA, 247
Bipartite gene-targeting, 231
Blast, 211, 212
Bleached, 379, 380, 389
Blue stain, 387
Blumenols, 158
Bordered pits, 370, 371, 373
Bore holes, 371, 386, 387
BROAD Institute, 207
Brown rots, 369–371, 375, 376, 378, 389, 391
Butanol, 322
C
Cand1/A, 192
Carbohydrate-active enzymes, 213–214
Carbon catabolite repression, 92, 421
Cargo-receptors, 247
Carminic acid, 254
Carotenoids, 324–326
Carrier protein, 245
Casein Kinase-1a (CK-1a), 79, 89
Catalytic, 373–378, 387
Cavity-formation, 384, 385
CAZy, 211
CAZy database, 213
CAZymes, 67, 373, 376, 378, 381, 385, 390, 391,
418, 419, 421–423
Cellobiohydrolases (CBH), 378, 380, 381
Cellobiose dehydrogenases, 376, 378, 380
Cellulase, 66, 373, 376, 381, 385, 390, 405
Cellulose, 369, 371–374, 376–378, 380–382, 384,
385, 388, 389, 391
Cellulose binding module, 381
Cellulosomes, 418–420
Cell wall, 154
Cell wall integrity pathway, 64–65, 270
Centromeres, 109, 110, 112
Chain length, 340, 347–351, 353, 357, 358, 360
Chelator-mediated Fenton (CMF), 373–375,
377, 378, 390, 391
Chemical cycling, 401
Chemical modification, 272
Chemical sensing, 179
Chitin-triggered immunity, 152
Chito-oligosaccharides, 151
Chromated copper arsenate (CCA), 384
Chromatin, 3
Chromatin remodelers, 85
Chromatin remodeling enzymes, 6
Chromosomal integration, 230
Circadian rhythms, 77
Citric acid, 323, 332
Citrinin, 253
Clock-ATPase, 6
Clock Box (c-box), 85
Clock-controlled genes (ccgs), 84, 91
CLOCKSWITCH, 6
Clonality, 145
Cloned, 383, 390
Co-cultivation, 276–280
Codon optimization, 234
Cofactor, 340–344, 346, 347, 350, 357
ATP, 340, 342–347, 350–353
NADH, 341, 343–347, 350
NADP, 341, 344–346
NADPH, 341, 343–348, 350, 354, 357
Combinatorial synthetic biology, 273–274
Compatible solutes, 406
Compensation, 78
Confocal microscopy, 144
Conidial Separation Protein 1 (CSP-1), 83
Conservation, 403
Constitutive heterochromatin, 12
Constitutive promoter, 271
COP9 signalosome (CSN), 190–193
Core clock, 79
Co-suppression, 105, 109
CRISPR/Cas9, 214, 216, 274–275, 302, 307
Cryptochromes, 181, 182, 301
Crystalline cellulose, 380, 381, 388
Cultivation, 402–403
Cultivation conditions, 407
Cultured diversity, 402
446
Subject Index