258
M. Melicherčík et al.
8.5.1 Order Parameters
In all simulations of the membrane gel phase, the peptides caused changes of the
lipid bilayer into less ordered state (lower values of deuterium order parameters)—
Fig. 8.1. Each peptide decreases these parameters by different value. The temperFig. 8.7 Two ns distant
frames from trajectory with
small differences in atoms
positions, but with very
changed helix parameters
(calculated by g_helix)
Fig. 8.8 Ramachandran graphs of frames from Fig. 8.7
M. Melicherčík et al.
8.5.1 Order Parameters
In all simulations of the membrane gel phase, the peptides caused changes of the
lipid bilayer into less ordered state (lower values of deuterium order parameters)—
Fig. 8.1. Each peptide decreases these parameters by different value. The temperFig. 8.7 Two ns distant
frames from trajectory with
small differences in atoms
positions, but with very
changed helix parameters
(calculated by g_helix)
Fig. 8.8 Ramachandran graphs of frames from Fig. 8.7