Stumpp, M.T., Forrer, P., Binz, H.K., Plückthun, A. (2003) Designing repeat proteins: modular leucine-rich repeat
protein libraries based on the mammalian ribonuclease inhibitor family. J. Mol. Biol. 332:471–487.
Suárez-Suárez, S., Carriedo, G.A., Presa Soto, A. (2013) Gold-decorated chiral macroporous films by the self-assembly
of functionalised block copolymers. Chem. Eur. J. 19:15933–15940.
Tifrea, D.F., Pal, S., Le Bon, C., Giusti, F., Cocco, M.J., Zoonens, M., de la Maza, L.M. (2018a) Resiquimod conjugated
with amphipols bound to the Chlamydia muridarum MOMP enhances protection against a mucosal challenge.
In preparation.
Tifrea, D.F., Pal, S., Le Bon, C., Giusti, F., Popot, J.-L., Cocco, M.J., Zoonens, M., de la Maza, L.M. (2018b)
Co-delivery of amphipol-conjugated adjuvant with antigen, and adjuvant combinations, enhance immune protection
elicited by a membrane protein-based vaccine against a mucosal challenge with Chlamydia. Submitted for
publication.
Torres-Rodriguez, L.M., Roget, A., Billon, M., Bidan, G. (1998) Synthesis of a biotin functionalized pyrrole and its
electropolymerization: Toward a versatile avidin biosensor. Chem. Commun. 1998:1993–1994.
Tribet, C., Porcar, I., Bonnefont, P.A., Audebert, R. (1998) Association between hydrophobically modified polyanions
and negatively charged bovine serum albumin. J. Phys. Chem. B 102:1327–1333.
Troughton, E.B., Bain, C.D., Whitesides, G.M., Nuzzo, R.G., Allara, D.L., Porter, M.D. (1988) Monolayer films
prepared by the spontaneous self-assembly of symmetrical and unsymmetrical dialkyl sulfides from solution onto
gold substrates: Structure, properties, and reactivity of constituent functional groups. Langmuir 4:365–385.
Valiokas, R., Vaitekonis, Š., Klenkar, G., Trinkunas, G., Liedberg, B. (2006) Selective recruitment of membrane protein
complexes onto gold substrates patterned by dip-pen nanolithography. Langmuir 22:3456–3460.
Weinrich, D., Jonkheijm, P., Niemeyer, C.M., Waldmann, H. (2009) Applications of protein biochips in biomedical and
biotechnological research. Angew. Chem. Int. Ed. Engl. 48:7744–7751.
Wingren, C., Borrebaeck, C.A. (2007) Progress in miniaturization of protein arrays-a step closer to high-density
nanoarrays. Drug Discov. Today 12:813–818.
Wong, I.Y., Melosh, N.A. (2009) Directed hybridization and melting of DNA linkers using counterion-screened electric
fields. Nano Lett. 9:3521–3526.
Xu, C., Xu, K., Gu, H., Zhong, X., Guo, Z., Zheng, R., Zhang, X., Xu, B. (2004) Nitrilotriacetic acid-modified magnetic
nanoparticles as a general agent to bind histidine-tagged proteins. J. Am. Chem. Soc. 126:3392–3393.
Yang, Q., Lundahl, P. (1994) Steric immobilization of liposomes in chromatographic gel beads and incorporation of
integral membrane proteins into their lipid bilayers. Anal. Biochem. 218:210–221.
Yang, S.T., Witkowski, A., Hutchins, R.S., Scott, D.L., Bachas, L.G. (1998) Biotin-modified surfaces by electrochemical
polymerization of biotinyl-tyramide. Electroanalysis 10:58–60.
Zdyrko, B., Klep, V., Luzinov, I. (2003) Synthesis and surface morphology of high-density poly(ethylene glycol) grafted
layers. Langmuir 19:10179–10187.
Zhang, G.J., Tanii, T., Kanari, Y., Ohdomari, I. (2007) Production of nanopatterns by a combination of electron beam
lithography and a self-assembled monolayer for an antibody nanoarray. J. Nanosci. Nanotechnol. 7:410–417.
Zheng, Z.J., Daniel, W.L., Giam, L.R., Huo, F.W., Senesi, A.J., Zheng, G.F., Mirkin, C.A. (2009) Multiplexed protein
arrays enabled by polymer pen lithography: Addressing the inking challenge. Angew. Chem., Int. Ed. 48:7626–7629.
Zoonens, M., Giusti, F., Zito, F., Popot, J.-L. (2007) Dynamics of membrane protein/amphipol association studied by
Förster resonance energy transfer. Implications for in vitro studies of amphipol-stabilized membrane proteins.
Biochemistry 46:10392–10404.
Zoonens, M., Popot, J.-L. (2014) Amphipols for each season. J. Membr. Biol. 247:759–796.
Zoonens, M., Zito, F., Martinez, K.L., Popot, J.-L. (2014) Amphipols: a general introduction and some protocols, in:
Mus-Veteau, I., ed., Membrane Proteins Production for Structural Analysis. Springer, New York, Heidelberg,
Dordrecht, London, pp. 173–203.
References
623
protein libraries based on the mammalian ribonuclease inhibitor family. J. Mol. Biol. 332:471–487.
Suárez-Suárez, S., Carriedo, G.A., Presa Soto, A. (2013) Gold-decorated chiral macroporous films by the self-assembly
of functionalised block copolymers. Chem. Eur. J. 19:15933–15940.
Tifrea, D.F., Pal, S., Le Bon, C., Giusti, F., Cocco, M.J., Zoonens, M., de la Maza, L.M. (2018a) Resiquimod conjugated
with amphipols bound to the Chlamydia muridarum MOMP enhances protection against a mucosal challenge.
In preparation.
Tifrea, D.F., Pal, S., Le Bon, C., Giusti, F., Popot, J.-L., Cocco, M.J., Zoonens, M., de la Maza, L.M. (2018b)
Co-delivery of amphipol-conjugated adjuvant with antigen, and adjuvant combinations, enhance immune protection
elicited by a membrane protein-based vaccine against a mucosal challenge with Chlamydia. Submitted for
publication.
Torres-Rodriguez, L.M., Roget, A., Billon, M., Bidan, G. (1998) Synthesis of a biotin functionalized pyrrole and its
electropolymerization: Toward a versatile avidin biosensor. Chem. Commun. 1998:1993–1994.
Tribet, C., Porcar, I., Bonnefont, P.A., Audebert, R. (1998) Association between hydrophobically modified polyanions
and negatively charged bovine serum albumin. J. Phys. Chem. B 102:1327–1333.
Troughton, E.B., Bain, C.D., Whitesides, G.M., Nuzzo, R.G., Allara, D.L., Porter, M.D. (1988) Monolayer films
prepared by the spontaneous self-assembly of symmetrical and unsymmetrical dialkyl sulfides from solution onto
gold substrates: Structure, properties, and reactivity of constituent functional groups. Langmuir 4:365–385.
Valiokas, R., Vaitekonis, Š., Klenkar, G., Trinkunas, G., Liedberg, B. (2006) Selective recruitment of membrane protein
complexes onto gold substrates patterned by dip-pen nanolithography. Langmuir 22:3456–3460.
Weinrich, D., Jonkheijm, P., Niemeyer, C.M., Waldmann, H. (2009) Applications of protein biochips in biomedical and
biotechnological research. Angew. Chem. Int. Ed. Engl. 48:7744–7751.
Wingren, C., Borrebaeck, C.A. (2007) Progress in miniaturization of protein arrays-a step closer to high-density
nanoarrays. Drug Discov. Today 12:813–818.
Wong, I.Y., Melosh, N.A. (2009) Directed hybridization and melting of DNA linkers using counterion-screened electric
fields. Nano Lett. 9:3521–3526.
Xu, C., Xu, K., Gu, H., Zhong, X., Guo, Z., Zheng, R., Zhang, X., Xu, B. (2004) Nitrilotriacetic acid-modified magnetic
nanoparticles as a general agent to bind histidine-tagged proteins. J. Am. Chem. Soc. 126:3392–3393.
Yang, Q., Lundahl, P. (1994) Steric immobilization of liposomes in chromatographic gel beads and incorporation of
integral membrane proteins into their lipid bilayers. Anal. Biochem. 218:210–221.
Yang, S.T., Witkowski, A., Hutchins, R.S., Scott, D.L., Bachas, L.G. (1998) Biotin-modified surfaces by electrochemical
polymerization of biotinyl-tyramide. Electroanalysis 10:58–60.
Zdyrko, B., Klep, V., Luzinov, I. (2003) Synthesis and surface morphology of high-density poly(ethylene glycol) grafted
layers. Langmuir 19:10179–10187.
Zhang, G.J., Tanii, T., Kanari, Y., Ohdomari, I. (2007) Production of nanopatterns by a combination of electron beam
lithography and a self-assembled monolayer for an antibody nanoarray. J. Nanosci. Nanotechnol. 7:410–417.
Zheng, Z.J., Daniel, W.L., Giam, L.R., Huo, F.W., Senesi, A.J., Zheng, G.F., Mirkin, C.A. (2009) Multiplexed protein
arrays enabled by polymer pen lithography: Addressing the inking challenge. Angew. Chem., Int. Ed. 48:7626–7629.
Zoonens, M., Giusti, F., Zito, F., Popot, J.-L. (2007) Dynamics of membrane protein/amphipol association studied by
Förster resonance energy transfer. Implications for in vitro studies of amphipol-stabilized membrane proteins.
Biochemistry 46:10392–10404.
Zoonens, M., Popot, J.-L. (2014) Amphipols for each season. J. Membr. Biol. 247:759–796.
Zoonens, M., Zito, F., Martinez, K.L., Popot, J.-L. (2014) Amphipols: a general introduction and some protocols, in:
Mus-Veteau, I., ed., Membrane Proteins Production for Structural Analysis. Springer, New York, Heidelberg,
Dordrecht, London, pp. 173–203.
References
623