Henrich, E., Ma, Y., Engels, I., Münch, D., Otten, C., Schneider, T., Henrichfreise, B., Sahl, H.G., Dötsch, V., Bernhard,
F. (2016) Lipid requirements for the enzymatic activity of MraY translocases and in vitro reconstitution of Lipid II
synthesis pathway. J. Biol. Chem. 291:2535–2546.
Henrich, E., Peetz, O., Hein, C., LaGuerre, A., Hoffmann, B., Hoffmann, J., Dötsch, V., Bernhard, F., Morgner,
N. (2017) Analyzing native membrane protein assembly in nanodiscs by combined non-covalent mass spectrometry
and synthetic biology. eLife 6:e20954.
Ho, D.N., Pomroy, N.C., Cuesta-Seijo, J.A., Privé, G.G. (2008) Crystal structure of a self-assembling lipopeptide
detergent at 1.20 Å. Proc. Natl. Acad. Sci. USA 105:12861–12866.
Hopper, J.T.S., Yu, Y.T.-C., Li, D., Raymond, A., Bostock, M., Liko, I., Mikhailov, V., Laganowsky, A., Benesch, J.L.
P., Caffrey, M., Nietlispach, D., Robinson, C.V. (2013) Detergent-free mass spectrometry of membrane protein
complexes. Nat. Meth. 10:1206–1208.
Howell, S.C., Mesleh, M.F., Opella, S.J. (2005) NMR structure determination of a membrane protein with two
transmembrane helices in micelles: MerF of the bacterial mercury detoxification system. Biochemistry
44:5196–5206.
Imura, T., Tsukui, Y., Sakai, K., Sakai, H., Taira, T., Kitamoto, D. (2014a) Minimum amino acid residues of an α-helical
peptide leading to lipid nanodisc formation. J. Oleo Sci. 63:1203–1208.
Imura, T., Tsukui, Y., Taira, T., Aburai, K., Sakai, K., Sakai, H., Abe, M., Kitamoto, D. (2014b) Surfactant-like
properties of an amphiphilic α-helical peptide leading to lipid nanodisc formation. Langmuir 30:4752–4759.
Inagaki, S., Ghirlando, R. (2017) Nanodisc characterization by analytical ultracentrifugation. Nanotech. Rev. 6:3–14.
Israelachvili, J.N. (2011) Intermolecular and surface forces, 3rd edition. Academic Press, London, 706 p.
Israelachvili, J.N., Mitchell, D.J., Ninham, B.W. (1977) Theory of self-assembly of lipid bilayers and vesicles. Biochim.
Biophys. Acta 470:185–201.
Johansson, L.C., Wöhri, A.B., Katona, G., Engström, S., Neutze, R. (2009) Membrane protein crystallization from lipidic
phases. Curr. Opin. Struct. Biol. 19:372–378.
Johnson, P.J., Halpin, A., Morizumi, T., Brown, L.S., Prokhorenko, V.I., Ernst, O.P., Dwayne Miller, R.J. (2014) The
photocycle and ultrafast vibrational dynamics of bacteriorhodopsin in lipid nanodiscs. Phys. Chem. Chem. Phys.
16:21310–21320
Johnson, Z.L., Chen, J. (2017) Structural basis of substrate recognition by the multidrug resistance protein MRP1. Cell
168:1075–1085.
Jonas, A. (1986) Reconstitution of high-density lipoproteins. Methods Enzymol. 128:553–582.
Jonas, A., Kezdy, K.E., Wald, J.H. (1989) Defined apolipoprotein A-I conformations in reconstituted high-density
lipoprotein discs. J. Biol. Chem. 264:4818–4824.
Jonas, A., von Eckardstein, A., Kézdy, K.E., Steinmetz, A., Assmann, G. (1991) Structural and functional properties of
reconstituted high-density lipoprotein discs prepared with six apolipoprotein A-I variants. J. Lipid Res. 32:97–106.
Jonas, A., Wald, J.H., Toohill, K.L., Krul, E.S., Kézdy, K.E. (1990) Apolipoprotein A-I structure and lipid properties in
homogeneous, reconstituted spherical and discoidal high density lipoproteins. J. Biol. Chem. 265:22123–22129.
Joubert, O., Nehmé, R., Bidet, M., Mus-Veteau, I. (2010) Heterologous expression of human membrane receptors in the
yeast Saccharomyces cerevisiae, in: Mus-Veteau, I., ed., Heterologous expression of membrane proteins. Humana
Press, New York, pp. 87–103.
Kang, C., Vanoye, C.G., Welch, R.C., Van Horn, W.D., Sanders, C.R. (2010) Functional delivery of a membrane protein
into oocyte membranes using bicelles. Biochemistry 49:653–655.
Kang, Y., Zhou, X.E., Gao, X., He, Y., Liu, W., Ishchenko, A., Barty, A., White, T.A., Yefanov, O., Han, G.W., Xu, Q.,
deWaal, P.W., Ke, J., Tan, M.H.E., Zhang, C., Moeller, A., West, G.M., Pascal, B.D., Van Eps, N., Caro, L.N.,
Vishnivetskiy, S.A., Lee, R.J., Suino-Powell, K.M., Gu, X., Pal, K., Ma, J., Zhi, X., Boutet, S., Williams, G.J.,
Messerschmidt, M., Gati, C., Zatsepin, N.A., Wang, D., James, D., Basu, S., Roy-Chowdhury, S., Conrad, C.E., Coe,
J., Liu, H., Lisova, S., Kupitz, C., Grotjohann, I., Fromme, R., Jiang, Y., Tan, M., Yang, H., Li, J., Wang, M., Zheng,
Z., Li, D., Howe, N., Zhao, Y., Standfuss, J., Diederichs, K., Dong, Y., Potter, C.S., Carragher, B., Caffrey, M., Jiang,
H., Chapman, H.N., Spence, J.C.H., Fromme, P., Weierstall, U., Ernst, O.P., Katritch, V., Gurevich, V.V., Griffin, P.
R., Hubbell, W.L., Stevens, R.C., Cherezov, V., Melcher, K., Xu, E. (2015) Crystal structure of rhodopsin bound to
arrestin by femtosecond X-ray laser. Nature 523:561–567.
Kariyazono, H., Nadai, R., Miyajima, R., Takechi-Haraya, Y., Baba, T., Shigenaga, A., Okuhira, K., Otaka, A.,
Saito, H. (2016) Formation of stable nanodiscs by bihelical apolipoprotein A-I mimetic peptide. J. Pept. Sci.
22:116–122.
Katayama, H., Wang, J., Tama, F., Chollet, L., Gogol, E.P., Collier, R.J., Fisher, M.T. (2010) Three-dimensional
structure of the anthrax toxin pore inserted into lipid nanodiscs and lipid vesicles. Proc. Natl. Acad. Sci. USA
107:3453–3457.
Katzen, F., Fletcher, J.E., Yang, J.P., Kang, D., Peterson, T.C., Cappuccio, J.A., Blanchette, C.D., Sulchek, T., Chromy,
B.A., Hoeprich, P.D., Coleman, M.A., Kudlicki, W. (2008) Insertion of membrane proteins into discoidal membranes
using a cell-free protein expression approach. J. Proteome Res. 7:3535–3542.
140
3 Alternatives to Detergents for Handling Membrane Proteins in Aqueous Solutions
F. (2016) Lipid requirements for the enzymatic activity of MraY translocases and in vitro reconstitution of Lipid II
synthesis pathway. J. Biol. Chem. 291:2535–2546.
Henrich, E., Peetz, O., Hein, C., LaGuerre, A., Hoffmann, B., Hoffmann, J., Dötsch, V., Bernhard, F., Morgner,
N. (2017) Analyzing native membrane protein assembly in nanodiscs by combined non-covalent mass spectrometry
and synthetic biology. eLife 6:e20954.
Ho, D.N., Pomroy, N.C., Cuesta-Seijo, J.A., Privé, G.G. (2008) Crystal structure of a self-assembling lipopeptide
detergent at 1.20 Å. Proc. Natl. Acad. Sci. USA 105:12861–12866.
Hopper, J.T.S., Yu, Y.T.-C., Li, D., Raymond, A., Bostock, M., Liko, I., Mikhailov, V., Laganowsky, A., Benesch, J.L.
P., Caffrey, M., Nietlispach, D., Robinson, C.V. (2013) Detergent-free mass spectrometry of membrane protein
complexes. Nat. Meth. 10:1206–1208.
Howell, S.C., Mesleh, M.F., Opella, S.J. (2005) NMR structure determination of a membrane protein with two
transmembrane helices in micelles: MerF of the bacterial mercury detoxification system. Biochemistry
44:5196–5206.
Imura, T., Tsukui, Y., Sakai, K., Sakai, H., Taira, T., Kitamoto, D. (2014a) Minimum amino acid residues of an α-helical
peptide leading to lipid nanodisc formation. J. Oleo Sci. 63:1203–1208.
Imura, T., Tsukui, Y., Taira, T., Aburai, K., Sakai, K., Sakai, H., Abe, M., Kitamoto, D. (2014b) Surfactant-like
properties of an amphiphilic α-helical peptide leading to lipid nanodisc formation. Langmuir 30:4752–4759.
Inagaki, S., Ghirlando, R. (2017) Nanodisc characterization by analytical ultracentrifugation. Nanotech. Rev. 6:3–14.
Israelachvili, J.N. (2011) Intermolecular and surface forces, 3rd edition. Academic Press, London, 706 p.
Israelachvili, J.N., Mitchell, D.J., Ninham, B.W. (1977) Theory of self-assembly of lipid bilayers and vesicles. Biochim.
Biophys. Acta 470:185–201.
Johansson, L.C., Wöhri, A.B., Katona, G., Engström, S., Neutze, R. (2009) Membrane protein crystallization from lipidic
phases. Curr. Opin. Struct. Biol. 19:372–378.
Johnson, P.J., Halpin, A., Morizumi, T., Brown, L.S., Prokhorenko, V.I., Ernst, O.P., Dwayne Miller, R.J. (2014) The
photocycle and ultrafast vibrational dynamics of bacteriorhodopsin in lipid nanodiscs. Phys. Chem. Chem. Phys.
16:21310–21320
Johnson, Z.L., Chen, J. (2017) Structural basis of substrate recognition by the multidrug resistance protein MRP1. Cell
168:1075–1085.
Jonas, A. (1986) Reconstitution of high-density lipoproteins. Methods Enzymol. 128:553–582.
Jonas, A., Kezdy, K.E., Wald, J.H. (1989) Defined apolipoprotein A-I conformations in reconstituted high-density
lipoprotein discs. J. Biol. Chem. 264:4818–4824.
Jonas, A., von Eckardstein, A., Kézdy, K.E., Steinmetz, A., Assmann, G. (1991) Structural and functional properties of
reconstituted high-density lipoprotein discs prepared with six apolipoprotein A-I variants. J. Lipid Res. 32:97–106.
Jonas, A., Wald, J.H., Toohill, K.L., Krul, E.S., Kézdy, K.E. (1990) Apolipoprotein A-I structure and lipid properties in
homogeneous, reconstituted spherical and discoidal high density lipoproteins. J. Biol. Chem. 265:22123–22129.
Joubert, O., Nehmé, R., Bidet, M., Mus-Veteau, I. (2010) Heterologous expression of human membrane receptors in the
yeast Saccharomyces cerevisiae, in: Mus-Veteau, I., ed., Heterologous expression of membrane proteins. Humana
Press, New York, pp. 87–103.
Kang, C., Vanoye, C.G., Welch, R.C., Van Horn, W.D., Sanders, C.R. (2010) Functional delivery of a membrane protein
into oocyte membranes using bicelles. Biochemistry 49:653–655.
Kang, Y., Zhou, X.E., Gao, X., He, Y., Liu, W., Ishchenko, A., Barty, A., White, T.A., Yefanov, O., Han, G.W., Xu, Q.,
deWaal, P.W., Ke, J., Tan, M.H.E., Zhang, C., Moeller, A., West, G.M., Pascal, B.D., Van Eps, N., Caro, L.N.,
Vishnivetskiy, S.A., Lee, R.J., Suino-Powell, K.M., Gu, X., Pal, K., Ma, J., Zhi, X., Boutet, S., Williams, G.J.,
Messerschmidt, M., Gati, C., Zatsepin, N.A., Wang, D., James, D., Basu, S., Roy-Chowdhury, S., Conrad, C.E., Coe,
J., Liu, H., Lisova, S., Kupitz, C., Grotjohann, I., Fromme, R., Jiang, Y., Tan, M., Yang, H., Li, J., Wang, M., Zheng,
Z., Li, D., Howe, N., Zhao, Y., Standfuss, J., Diederichs, K., Dong, Y., Potter, C.S., Carragher, B., Caffrey, M., Jiang,
H., Chapman, H.N., Spence, J.C.H., Fromme, P., Weierstall, U., Ernst, O.P., Katritch, V., Gurevich, V.V., Griffin, P.
R., Hubbell, W.L., Stevens, R.C., Cherezov, V., Melcher, K., Xu, E. (2015) Crystal structure of rhodopsin bound to
arrestin by femtosecond X-ray laser. Nature 523:561–567.
Kariyazono, H., Nadai, R., Miyajima, R., Takechi-Haraya, Y., Baba, T., Shigenaga, A., Okuhira, K., Otaka, A.,
Saito, H. (2016) Formation of stable nanodiscs by bihelical apolipoprotein A-I mimetic peptide. J. Pept. Sci.
22:116–122.
Katayama, H., Wang, J., Tama, F., Chollet, L., Gogol, E.P., Collier, R.J., Fisher, M.T. (2010) Three-dimensional
structure of the anthrax toxin pore inserted into lipid nanodiscs and lipid vesicles. Proc. Natl. Acad. Sci. USA
107:3453–3457.
Katzen, F., Fletcher, J.E., Yang, J.P., Kang, D., Peterson, T.C., Cappuccio, J.A., Blanchette, C.D., Sulchek, T., Chromy,
B.A., Hoeprich, P.D., Coleman, M.A., Kudlicki, W. (2008) Insertion of membrane proteins into discoidal membranes
using a cell-free protein expression approach. J. Proteome Res. 7:3535–3542.
140
3 Alternatives to Detergents for Handling Membrane Proteins in Aqueous Solutions