docking and dynamic simulations provide results that are highly consistent with
experimental approaches and provide a unique visualization opportunity of enzymeligand interactions. From this point of view, it can be concluded that molecular
interaction simulations that are architecturally developing more and more each day
will always maintain their place as a complementary tool to experimental biology.
Author Contributions Statement T.K. reviewed the literature, drew figures, created the tables, and contributed to the writing of Sects. 9.3, 9.4, 9.5, and 9.7. N.A.İ.
reviewed the literature; determined the topic; drew figures; created the tables;
contributed to the writing of Sects. 9.1, 9.2, and 9.7; and drafted the review. E.S.İ.
performed molecular docking, reviewed the literature, and contributed to the writing
of Sects. 9.6 and 9.7.
References
Abada EA, Masrahi YS, Al-Abboud M, Alnashiri HM, El-Gayar KE (2018) Bioethanol production
with cellulase enzyme from Bacillus cereus isolated from sesame seed residue from the Jazan
region. Bioresources 13(2):3832–3845
Abdel-Hamid AM, Solbiati JO, Cann IK (2013) Insights into lignin degradation and its potential
industrial applications. In: Advances in applied microbiology, vol 82. Elsevier, Amsterdam, pp
1–28
Abdullah JJ, Greetham D, Du C, Tucker GA (2020) Viability of municipal solid waste as a source
for bioenergy products production. Int J Environ Agric Biotechnol 5(2):1767
Fig. 9.9 The workflow of a classical molecular docking experiment
9 Microbial and Bioinformatics Approach in Biofuel Production
291
experimental approaches and provide a unique visualization opportunity of enzymeligand interactions. From this point of view, it can be concluded that molecular
interaction simulations that are architecturally developing more and more each day
will always maintain their place as a complementary tool to experimental biology.
Author Contributions Statement T.K. reviewed the literature, drew figures, created the tables, and contributed to the writing of Sects. 9.3, 9.4, 9.5, and 9.7. N.A.İ.
reviewed the literature; determined the topic; drew figures; created the tables;
contributed to the writing of Sects. 9.1, 9.2, and 9.7; and drafted the review. E.S.İ.
performed molecular docking, reviewed the literature, and contributed to the writing
of Sects. 9.6 and 9.7.
References
Abada EA, Masrahi YS, Al-Abboud M, Alnashiri HM, El-Gayar KE (2018) Bioethanol production
with cellulase enzyme from Bacillus cereus isolated from sesame seed residue from the Jazan
region. Bioresources 13(2):3832–3845
Abdel-Hamid AM, Solbiati JO, Cann IK (2013) Insights into lignin degradation and its potential
industrial applications. In: Advances in applied microbiology, vol 82. Elsevier, Amsterdam, pp
1–28
Abdullah JJ, Greetham D, Du C, Tucker GA (2020) Viability of municipal solid waste as a source
for bioenergy products production. Int J Environ Agric Biotechnol 5(2):1767
Fig. 9.9 The workflow of a classical molecular docking experiment
9 Microbial and Bioinformatics Approach in Biofuel Production
291