58
Head, W. D., & Carpenter, E. J. (1975). Nitrogen fixation associated with the marine macroalga
Codium fragile. Limnology and Oceanography, 20(5), 815–823.
Hernandez-Agreda, A., Gates, R. D., & Ainsworth, T. D. (2017). Defining the core microbiome in
corals’ microbial soup. Trends in Microbiology, 25(2), 125–140.
Hewson, I., Moisander, P. H., Achilles, K. M., Carlson, C. A., & Bethany D. Jenkins, et al. (2007).
Characteristics of diazotrophs in surface to abyssopelagic waters of the Sargasso Sea. Aquatic
Microbial Ecology, 46, 15–30.
Hilton, J. A., Foster, R. A., Tripp, H. J., Carter, B. J., Zehr, J. P., et al. (2013). Genomic deletions disrupt nitrogen metabolism pathways of a cyanobacterial diatom symbiont. Nature
Communications, 4, 1767. https://doi.org/10.1038/ncomms2748.
Howarth, R. W., Marino, R., Lane, J., & Cole, J. J. (1988). Nitrogen fixation in freshwater, estuarine, and marine ecoystems. 1. Rates and importance. Limnology and Oceanography, 33,
669–687.
Huber, A. L. (1986). Nitrogen fixation by Nodularia spumigena Mertens (Cyanobacteriaceae). 1:
Field studies and the contribution of blooms to the nitrogen budget of the Peel-Harvey Esturary,
Western Australia. Hydrobiologia, 131, 193–203.
Hynes, A. M., Webb, E. A., Doney, S. C., & Waterbury, J. B. (2012). Comparison of cultured
Trichodesmium (Cyanophyceae) with species characterized from the field. Journal of
Phycology, 48(1), 196–210. https://doi.org/10.1111/j.1529- 8817.2011.01096.x.
Jayakumar, A., Chang, B. X., Widner, B., Bernhardt, P., Mulholland, M. R., et al. (2017). Biological
nitrogen fixation in the oxygen-minimum region of the eastern tropical North Pacific Ocean.
The ISME Journal, 11(10), 2356.
Kapili, B. J., Samuel, E. B., Buckley, D. H., & Dekas, A. E. (2019). Evidence for phylogenetically
and catabolically diverse active diazotrophs in deep-sea sediment. The ISME Journal. https://
doi.org/10.1038/s41396- 41019- 40584- 41398.
Kapili, B. J., Barnett, S. E., Buckley, D. H., & Dekas, A. E. (2020). Evidence for phylogenetically
and catabolically diverse active diazotrophs in deep-sea sediment. The ISME Journal, 14(4),
971–983. https://doi.org/10.1038/s41396- 019- 0584- 8. PMID – 31907368.
Karthikeyan, S., Rodriguez-R, L. M., Heritier-Robbins, P., Kim, M., Overholt, W. A., et al. (2019).
“Candidatus Macondimonas diazotrophica”, a novel gammaproteobacterial genus dominating
crude-oil-contaminated coastal sediments. The ISME Journal, 13(8), 2129–2134.
Langlois, R., Großkopf, T., Mills, M., Takeda, S., & LaRoche, J. (2015). Widespread distribution
and expression of Gamma A (UMB), an uncultured, diazotrophic, γ-proteobacterial nifH phylotype. PloS One, 10(6), e0128912. %@ 0121932-0126203.
Lesser, M. P., Falcon, L. I., Rodriguez-Roman, A., Enriquez, S., Hoegh-Guldberg, O., et al. (2007).
Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian
coral Montastraea cavernosa. Marine Ecology Progress Series, 346, 143–152.
Longhurst, A. (2007). Ecological geography of the sea (2nd ed.). San Diego: Academic.
Löscher, C. R., Großkopf, T., Desai, F. D., Gill, D., Schunck, H., et al. (2014). Facets of diazotrophy in the oxygen minimum zone waters off Peru. The ISME Journal, 8(11), 2180.
Mareš, J., Johansen, J. R., Hauer, T., Zima, J., Jr., Ventura, S., et al. (2019). Taxonomic resolution
of the genus Cyanothece (Chroococcales, Cyanobacteria), with a treatment on Gloeothece and
three new genera, Crocosphaera, Rippkaea, and Zehria. Journal of Phycology, 55(3), 578–610.
Martínez-Pérez, C., Mohr, W., Schwedt, A., Dürschlag, J., Callbeck, C. M., et al. (2018). Metabolic
versatility of a novel N 2 -fixing Alphaproteobacterium isolated from a marine oxygen minimum
zone. Environmental Microbiology, 20(2), 755–768.
Masuda, T., Inomura, K., Takahata, N., Shiozaki, T., Sano, Y., et al. (2020). Heterogeneous
nitrogen fixation rates confer energetic advantage and expanded ecological niche of unicellular diazotroph populations. Communications Biology, 3(1), 172. https://doi.org/10.1038/
s42003- 020- 0894- 4.
Mazard, S. L., Fuller, N. J., Orcutt, K. M., Bridle, O., & Scanlan, D. J. (2004). PCR analysis
of the distribution of unicellular cyanobacterial diazotrophs in the Arabian Sea. Applied and
Environmental Microbiology, 70(12), 7355–7364.
4 Microorganisms and Habitats
Head, W. D., & Carpenter, E. J. (1975). Nitrogen fixation associated with the marine macroalga
Codium fragile. Limnology and Oceanography, 20(5), 815–823.
Hernandez-Agreda, A., Gates, R. D., & Ainsworth, T. D. (2017). Defining the core microbiome in
corals’ microbial soup. Trends in Microbiology, 25(2), 125–140.
Hewson, I., Moisander, P. H., Achilles, K. M., Carlson, C. A., & Bethany D. Jenkins, et al. (2007).
Characteristics of diazotrophs in surface to abyssopelagic waters of the Sargasso Sea. Aquatic
Microbial Ecology, 46, 15–30.
Hilton, J. A., Foster, R. A., Tripp, H. J., Carter, B. J., Zehr, J. P., et al. (2013). Genomic deletions disrupt nitrogen metabolism pathways of a cyanobacterial diatom symbiont. Nature
Communications, 4, 1767. https://doi.org/10.1038/ncomms2748.
Howarth, R. W., Marino, R., Lane, J., & Cole, J. J. (1988). Nitrogen fixation in freshwater, estuarine, and marine ecoystems. 1. Rates and importance. Limnology and Oceanography, 33,
669–687.
Huber, A. L. (1986). Nitrogen fixation by Nodularia spumigena Mertens (Cyanobacteriaceae). 1:
Field studies and the contribution of blooms to the nitrogen budget of the Peel-Harvey Esturary,
Western Australia. Hydrobiologia, 131, 193–203.
Hynes, A. M., Webb, E. A., Doney, S. C., & Waterbury, J. B. (2012). Comparison of cultured
Trichodesmium (Cyanophyceae) with species characterized from the field. Journal of
Phycology, 48(1), 196–210. https://doi.org/10.1111/j.1529- 8817.2011.01096.x.
Jayakumar, A., Chang, B. X., Widner, B., Bernhardt, P., Mulholland, M. R., et al. (2017). Biological
nitrogen fixation in the oxygen-minimum region of the eastern tropical North Pacific Ocean.
The ISME Journal, 11(10), 2356.
Kapili, B. J., Samuel, E. B., Buckley, D. H., & Dekas, A. E. (2019). Evidence for phylogenetically
and catabolically diverse active diazotrophs in deep-sea sediment. The ISME Journal. https://
doi.org/10.1038/s41396- 41019- 40584- 41398.
Kapili, B. J., Barnett, S. E., Buckley, D. H., & Dekas, A. E. (2020). Evidence for phylogenetically
and catabolically diverse active diazotrophs in deep-sea sediment. The ISME Journal, 14(4),
971–983. https://doi.org/10.1038/s41396- 019- 0584- 8. PMID – 31907368.
Karthikeyan, S., Rodriguez-R, L. M., Heritier-Robbins, P., Kim, M., Overholt, W. A., et al. (2019).
“Candidatus Macondimonas diazotrophica”, a novel gammaproteobacterial genus dominating
crude-oil-contaminated coastal sediments. The ISME Journal, 13(8), 2129–2134.
Langlois, R., Großkopf, T., Mills, M., Takeda, S., & LaRoche, J. (2015). Widespread distribution
and expression of Gamma A (UMB), an uncultured, diazotrophic, γ-proteobacterial nifH phylotype. PloS One, 10(6), e0128912. %@ 0121932-0126203.
Lesser, M. P., Falcon, L. I., Rodriguez-Roman, A., Enriquez, S., Hoegh-Guldberg, O., et al. (2007).
Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian
coral Montastraea cavernosa. Marine Ecology Progress Series, 346, 143–152.
Longhurst, A. (2007). Ecological geography of the sea (2nd ed.). San Diego: Academic.
Löscher, C. R., Großkopf, T., Desai, F. D., Gill, D., Schunck, H., et al. (2014). Facets of diazotrophy in the oxygen minimum zone waters off Peru. The ISME Journal, 8(11), 2180.
Mareš, J., Johansen, J. R., Hauer, T., Zima, J., Jr., Ventura, S., et al. (2019). Taxonomic resolution
of the genus Cyanothece (Chroococcales, Cyanobacteria), with a treatment on Gloeothece and
three new genera, Crocosphaera, Rippkaea, and Zehria. Journal of Phycology, 55(3), 578–610.
Martínez-Pérez, C., Mohr, W., Schwedt, A., Dürschlag, J., Callbeck, C. M., et al. (2018). Metabolic
versatility of a novel N 2 -fixing Alphaproteobacterium isolated from a marine oxygen minimum
zone. Environmental Microbiology, 20(2), 755–768.
Masuda, T., Inomura, K., Takahata, N., Shiozaki, T., Sano, Y., et al. (2020). Heterogeneous
nitrogen fixation rates confer energetic advantage and expanded ecological niche of unicellular diazotroph populations. Communications Biology, 3(1), 172. https://doi.org/10.1038/
s42003- 020- 0894- 4.
Mazard, S. L., Fuller, N. J., Orcutt, K. M., Bridle, O., & Scanlan, D. J. (2004). PCR analysis
of the distribution of unicellular cyanobacterial diazotrophs in the Arabian Sea. Applied and
Environmental Microbiology, 70(12), 7355–7364.
4 Microorganisms and Habitats