59
10. Cody RB, Laramée JA, Durst HD (2005) Versatile new ion source for the analysis of materials
in open air under ambient conditions. Anal Chem 77:2297–2302
11. Zhang Y, Ma XX, Zhang SC, Yang CD, Ouyang Z, Zhang XR (2009) Direct detection of
explosives on solid surfaces by low temperature plasma desorption mass spectrometry. Analyst
134:176–181
12. Balog J, Szaniszlo T, Schaefer K-C, Denes J, Lopata A, Godorhazy L, Szalay D, Balogh L,
Sasi-Szabo L, Toth M, Takats Z (2010) Identification of biological tissues by rapid evaporative
ionization mass spectrometry. Anal Chem 82:7343–7350
13. Liu J, Wang H, Manicke NE, Lin J-M, Cooks RG, Ouyang Z (2010) Development, characterization, and application of paper spray ionization. Anal Chem 82:2463–2471
14. Huang M, Jhang S, Chan Y, Cheng S, Cheng C, Shiea J (2014) Electrospray laser desorption
ionization mass spectrometry. In: Domin M, Cody R (eds) Ambient ionization mass spectrometry. New developments in mass spectrometry. Royal Society of Chemistry, pp 372–388
15. Vaclavik L, Zachariasova M, Hrbek V, Hajslova J (2010) Analysis of multiple mycotoxins in
cereals under ambient conditions using direct analysis in real time (DART) ionization coupled
to high resolution mass spectrometry. Talanta 82:1950–1957
16. Su H, Liu K-T, Chen B-H, Lin Y-P, Jiang Y-M, Tsai Y-H, Chang F-R, Shiea J, Lee C-W (2019)
Rapid identification of herbal toxins using electrospray laser desorption ionization mass spectrometry for emergency care. J Food Drug Anal 27:415–427
17. Wang R, Yin Y, Zhu Z-J (2019) Advancing untargeted metabolomics using data-independent
acquisition mass spectrometry technology. Anal Bioanal Chem 411:4349–4357
18. Fiorino GM, Fresch M, Brümmer I, Losito I, Arlorio M, Brockmeyer J, Monaci L (2019) Mass
spectrometry-based untargeted proteomics for the assessment of food authenticity: the case of
farmed versus wild-type salmon. J AOAC Int 102:1339–1345
19. Wu AHB, Colby J (2016) High-resolution mass spectrometry for untargeted drug screening.
In: Garg U (ed) Clinical applications of mass spectrometry in drug analysis. Methods in molecular biology, vol 1383. Humana Press, New York
20. Plumb RS, Johnson KA, Rainville P, Smith BW, Wilson ID, Castro-Perez JM, Nicholson JK
(2006) UPLC/MS
E ; a new approach for generating molecular fragment information for biomarker structure elucidation. Rapid Commun Mass Spectrom 20:1989–1994
21. Geiger T, Cox J, Mann M (2010) Proteomics on an orbitrap benchtop mass spectrometer using
all-ion fragmentation. Mol Cell Proteomics 9:2252–2261
22. Naz S, Gallart-Ayala H, Reinke SN, Mathon C, Blankley R, Chaleckis R, Wheelock CE (2017)
Development of a liquid chromatography-high resolution mass spectrometry metabolomics
method with high specificity for metabolite identification using all ion fragmentation acquisition. Anal Chem 89:7933–7942
23. Kramer G, Moerland PD, Jeeninga RE, Vlietstra WJ, Ringrose JH, Byrman C, Berkhout B,
Speijer D (2012) Proteomic analysis of HIV–T cell interaction: an update. Front Microbiol 3:240
24. Gillet LC, Navarro P, Tate S, Rost H, Selevsek N, Reiter L, Bonner R, Aebersold R (2012)
Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis. Mol Cell Proteomics
11:O111.016717
25. Bonner R, Hopfgartner G (2019) SWATH data independent acquisition mass spectrometry for
metabolomics. TrAC Trends Anal Chem 120:115278
26. Zhang Y, Bilbao A, Bruderer T, Luban J, Strambio-De-Castillia C, Lisacek F, Hopfgartner
G, Varesio E (2015) The use of variable Q1 isolation windows improves selectivity in
LC-SWATH-MS acquisition. J Proteome Res 14:4359–4371
27. Ludwig C, Gillet L, Rosenberger G, Amon S, Collins BC, Aebersold R (2018) Dataindependent acquisition-based SWATH-MS for quantitative proteomics: a tutorial. Mol Syst
Biol 14:e8126
28. Panchaud A, Scherl A, Shaffer SA, von Haller PD, Kulasekara HD, Miller SI, Goodlett DR
(2011) PAcIFIC: how to dive deeper into the proteomics ocean. Anal Chem 81:6481–6488
3 Mass Spectrometry Methods for Food Safety/Detection of Toxins in Food
10. Cody RB, Laramée JA, Durst HD (2005) Versatile new ion source for the analysis of materials
in open air under ambient conditions. Anal Chem 77:2297–2302
11. Zhang Y, Ma XX, Zhang SC, Yang CD, Ouyang Z, Zhang XR (2009) Direct detection of
explosives on solid surfaces by low temperature plasma desorption mass spectrometry. Analyst
134:176–181
12. Balog J, Szaniszlo T, Schaefer K-C, Denes J, Lopata A, Godorhazy L, Szalay D, Balogh L,
Sasi-Szabo L, Toth M, Takats Z (2010) Identification of biological tissues by rapid evaporative
ionization mass spectrometry. Anal Chem 82:7343–7350
13. Liu J, Wang H, Manicke NE, Lin J-M, Cooks RG, Ouyang Z (2010) Development, characterization, and application of paper spray ionization. Anal Chem 82:2463–2471
14. Huang M, Jhang S, Chan Y, Cheng S, Cheng C, Shiea J (2014) Electrospray laser desorption
ionization mass spectrometry. In: Domin M, Cody R (eds) Ambient ionization mass spectrometry. New developments in mass spectrometry. Royal Society of Chemistry, pp 372–388
15. Vaclavik L, Zachariasova M, Hrbek V, Hajslova J (2010) Analysis of multiple mycotoxins in
cereals under ambient conditions using direct analysis in real time (DART) ionization coupled
to high resolution mass spectrometry. Talanta 82:1950–1957
16. Su H, Liu K-T, Chen B-H, Lin Y-P, Jiang Y-M, Tsai Y-H, Chang F-R, Shiea J, Lee C-W (2019)
Rapid identification of herbal toxins using electrospray laser desorption ionization mass spectrometry for emergency care. J Food Drug Anal 27:415–427
17. Wang R, Yin Y, Zhu Z-J (2019) Advancing untargeted metabolomics using data-independent
acquisition mass spectrometry technology. Anal Bioanal Chem 411:4349–4357
18. Fiorino GM, Fresch M, Brümmer I, Losito I, Arlorio M, Brockmeyer J, Monaci L (2019) Mass
spectrometry-based untargeted proteomics for the assessment of food authenticity: the case of
farmed versus wild-type salmon. J AOAC Int 102:1339–1345
19. Wu AHB, Colby J (2016) High-resolution mass spectrometry for untargeted drug screening.
In: Garg U (ed) Clinical applications of mass spectrometry in drug analysis. Methods in molecular biology, vol 1383. Humana Press, New York
20. Plumb RS, Johnson KA, Rainville P, Smith BW, Wilson ID, Castro-Perez JM, Nicholson JK
(2006) UPLC/MS
E ; a new approach for generating molecular fragment information for biomarker structure elucidation. Rapid Commun Mass Spectrom 20:1989–1994
21. Geiger T, Cox J, Mann M (2010) Proteomics on an orbitrap benchtop mass spectrometer using
all-ion fragmentation. Mol Cell Proteomics 9:2252–2261
22. Naz S, Gallart-Ayala H, Reinke SN, Mathon C, Blankley R, Chaleckis R, Wheelock CE (2017)
Development of a liquid chromatography-high resolution mass spectrometry metabolomics
method with high specificity for metabolite identification using all ion fragmentation acquisition. Anal Chem 89:7933–7942
23. Kramer G, Moerland PD, Jeeninga RE, Vlietstra WJ, Ringrose JH, Byrman C, Berkhout B,
Speijer D (2012) Proteomic analysis of HIV–T cell interaction: an update. Front Microbiol 3:240
24. Gillet LC, Navarro P, Tate S, Rost H, Selevsek N, Reiter L, Bonner R, Aebersold R (2012)
Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis. Mol Cell Proteomics
11:O111.016717
25. Bonner R, Hopfgartner G (2019) SWATH data independent acquisition mass spectrometry for
metabolomics. TrAC Trends Anal Chem 120:115278
26. Zhang Y, Bilbao A, Bruderer T, Luban J, Strambio-De-Castillia C, Lisacek F, Hopfgartner
G, Varesio E (2015) The use of variable Q1 isolation windows improves selectivity in
LC-SWATH-MS acquisition. J Proteome Res 14:4359–4371
27. Ludwig C, Gillet L, Rosenberger G, Amon S, Collins BC, Aebersold R (2018) Dataindependent acquisition-based SWATH-MS for quantitative proteomics: a tutorial. Mol Syst
Biol 14:e8126
28. Panchaud A, Scherl A, Shaffer SA, von Haller PD, Kulasekara HD, Miller SI, Goodlett DR
(2011) PAcIFIC: how to dive deeper into the proteomics ocean. Anal Chem 81:6481–6488
3 Mass Spectrometry Methods for Food Safety/Detection of Toxins in Food