N Fertilization Dependent Bacterial and Archaeal …
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102. Wang, Y., Ke, X., Wu, L., Lu, Y.: Community composition of ammonia-oxidizing bacteria
and archaea in rice field soil as affected by nitrogen fertilization. Syst. Appl. Microbiol. 32,
27–36 (2009). https://doi.org/10.1016/j.syapm.2008.09.007
103. Wegner, C.E., Liesack, W.: Microbial community dynamics during the early stages of plant
polymer breakdown in paddy soil. Environ. Microbiol. 18, 2825–2842 (2016). https://doi.org/
10.1111/1462-2920.12815
104. Welte, C.U., et al.: Nitrate- and nitrite-dependent anaerobic oxidation of methane. Environ.
Microbiol. Rep. 8, 941–955 (2016). https://doi.org/10.1111/1758-2229.12487
105. Wu, Q., Chen, T., Chi, D., Xia, G., Sun, Y., Song, Y.: Increasing nitrogen use efficiency with
lower nitrogen application frequencies using zeolite in rice paddy fields. Int. Agrophys. 33,
263–269 (2019). https://doi.org/10.31545/intagr/109545
106. Yan-bing, H., et al.: A three-season field study on the in-situ remediation of Cd-contaminated
paddy soil using lime, two industrial by-products, and a low-Cd-accumulation rice cultivar.
Ecotoxicol. Environ. Saf. 136, 135–141 (2017). https://doi.org/10.1016/j.ecoenv.2016.11.005
107. Yang, X.R., et al.: Potential contribution of Anammox to nitrogen loss from paddy soils in
Southern China. Appl. Environ. Microbiol. 81, 938–947 (2015). https://doi.org/10.1128/aem.
02664-14
108. Yang, Y., Meng, T., Qian, X., Zhang, J., Cai, Z.: Evidence for nitrification ability controlling
nitrogen use efficiency and N losses via denitrification in paddy soils. Biol. Fert. Soils 53,
349–356 (2017). https://doi.org/10.1007/s00374-017-1185-1
109. Yoshida, M., Ishii, S., Otsuka, S., Senoo, K.: Temporal shifts in diversity and quantity of nirS
and nirK in a rice paddy field soil. Soil Biol. Biochem. 41, 2044–2051 (2009). https://doi.org/
10.1016/j.soilbio.2009.07.012
110. Zhan, Y., et al.: Fertilization shapes a well-organized community of bacterial decomposers
for accelerated paddy straw degradation. Sci. Rep. 8, 7981 (2018). https://doi.org/10.1038/
s41598-018-26375-8
111. Zhang, J., Lan, T., Müller, C., Cai, Z.: Dissimilatory nitrate reduction to ammonium (DNRA)
plays an important role in soil nitrogen conservation in neutral and alkaline but not acidic rice
soil. J. Soils Sediments 15, 523–531 (2015). https://doi.org/10.1007/s11368-014-1037-7
112. Zhang, J., et al.: Agricultural land use affects nitrate production and conservation in humid
subtropical soils in China. Soil Biol. Biochem. 62, 107–114 (2013). https://doi.org/10.1016/
j.soilbio.2013.03.006
113. Zhang, X., et al.: Thirty-one years of rice-rice-green manure rotations shape the rhizosphere
microbial community and enrich beneficial bacteria. Soil Biol. Biochem. 104, 208–217 (2017).
https://doi.org/10.1016/j.soilbio.2016.10.023
114. Zhang, Y., et al.: Soil N transformation mechanisms can effectively conserve N in soil under
saturated conditions compared to unsaturated conditions in subtropical China. Biol. Fert. Soils
54, 495–507 (2018). https://doi.org/10.1007/s00374-018-1276-7
115. Zhao, Z., et al.: Carbon and nitrogen availability in paddy soil affects rice photosynthate allocation, microbial community composition, and priming: combining continuous 13C labeling
with PLFA analysis Plant Soil (2018). https://doi.org/10.1007/s11104-018-3873-5
116. Zhong, W.H., Cai, Z.C.: Long-term effects of inorganic fertilizers on microbial biomass and
community functional diversity in a paddy soil derived from quaternary red clay. Appl. Soil
Ecol. 36, 84–91 (2007). https://doi.org/10.1016/j.apsoil.2006.12.001
117. Zhou, J., et al.: Consistent effects of nitrogen fertilization on soil bacterial communities in
black soils for two crop seasons in China. Sci. Rep. 7, 3267 (2017). https://doi.org/10.1038/
s41598-017-03539-6
118. Zhou, L., Wang, Y., Long, X.E., Guo, J., Zhu, G.: High abundance and diversity of nitritedependent anaerobic methane-oxidizing bacteria in a paddy field profile. FEMS Microbiol.
Lett. 360, 33–41 (2014). https://doi.org/10.1111/1574-6968.12567
119. Zhou, S., Borjigin, S., Riya, S., Terada, A., Hosomi, M.: The relationship between anammox
and denitrification in the sediment of an inland river. Sci. Total Environ. 490, 1029–1036
(2014). https://doi.org/10.1016/j.scitotenv.2014.05.096
85
102. Wang, Y., Ke, X., Wu, L., Lu, Y.: Community composition of ammonia-oxidizing bacteria
and archaea in rice field soil as affected by nitrogen fertilization. Syst. Appl. Microbiol. 32,
27–36 (2009). https://doi.org/10.1016/j.syapm.2008.09.007
103. Wegner, C.E., Liesack, W.: Microbial community dynamics during the early stages of plant
polymer breakdown in paddy soil. Environ. Microbiol. 18, 2825–2842 (2016). https://doi.org/
10.1111/1462-2920.12815
104. Welte, C.U., et al.: Nitrate- and nitrite-dependent anaerobic oxidation of methane. Environ.
Microbiol. Rep. 8, 941–955 (2016). https://doi.org/10.1111/1758-2229.12487
105. Wu, Q., Chen, T., Chi, D., Xia, G., Sun, Y., Song, Y.: Increasing nitrogen use efficiency with
lower nitrogen application frequencies using zeolite in rice paddy fields. Int. Agrophys. 33,
263–269 (2019). https://doi.org/10.31545/intagr/109545
106. Yan-bing, H., et al.: A three-season field study on the in-situ remediation of Cd-contaminated
paddy soil using lime, two industrial by-products, and a low-Cd-accumulation rice cultivar.
Ecotoxicol. Environ. Saf. 136, 135–141 (2017). https://doi.org/10.1016/j.ecoenv.2016.11.005
107. Yang, X.R., et al.: Potential contribution of Anammox to nitrogen loss from paddy soils in
Southern China. Appl. Environ. Microbiol. 81, 938–947 (2015). https://doi.org/10.1128/aem.
02664-14
108. Yang, Y., Meng, T., Qian, X., Zhang, J., Cai, Z.: Evidence for nitrification ability controlling
nitrogen use efficiency and N losses via denitrification in paddy soils. Biol. Fert. Soils 53,
349–356 (2017). https://doi.org/10.1007/s00374-017-1185-1
109. Yoshida, M., Ishii, S., Otsuka, S., Senoo, K.: Temporal shifts in diversity and quantity of nirS
and nirK in a rice paddy field soil. Soil Biol. Biochem. 41, 2044–2051 (2009). https://doi.org/
10.1016/j.soilbio.2009.07.012
110. Zhan, Y., et al.: Fertilization shapes a well-organized community of bacterial decomposers
for accelerated paddy straw degradation. Sci. Rep. 8, 7981 (2018). https://doi.org/10.1038/
s41598-018-26375-8
111. Zhang, J., Lan, T., Müller, C., Cai, Z.: Dissimilatory nitrate reduction to ammonium (DNRA)
plays an important role in soil nitrogen conservation in neutral and alkaline but not acidic rice
soil. J. Soils Sediments 15, 523–531 (2015). https://doi.org/10.1007/s11368-014-1037-7
112. Zhang, J., et al.: Agricultural land use affects nitrate production and conservation in humid
subtropical soils in China. Soil Biol. Biochem. 62, 107–114 (2013). https://doi.org/10.1016/
j.soilbio.2013.03.006
113. Zhang, X., et al.: Thirty-one years of rice-rice-green manure rotations shape the rhizosphere
microbial community and enrich beneficial bacteria. Soil Biol. Biochem. 104, 208–217 (2017).
https://doi.org/10.1016/j.soilbio.2016.10.023
114. Zhang, Y., et al.: Soil N transformation mechanisms can effectively conserve N in soil under
saturated conditions compared to unsaturated conditions in subtropical China. Biol. Fert. Soils
54, 495–507 (2018). https://doi.org/10.1007/s00374-018-1276-7
115. Zhao, Z., et al.: Carbon and nitrogen availability in paddy soil affects rice photosynthate allocation, microbial community composition, and priming: combining continuous 13C labeling
with PLFA analysis Plant Soil (2018). https://doi.org/10.1007/s11104-018-3873-5
116. Zhong, W.H., Cai, Z.C.: Long-term effects of inorganic fertilizers on microbial biomass and
community functional diversity in a paddy soil derived from quaternary red clay. Appl. Soil
Ecol. 36, 84–91 (2007). https://doi.org/10.1016/j.apsoil.2006.12.001
117. Zhou, J., et al.: Consistent effects of nitrogen fertilization on soil bacterial communities in
black soils for two crop seasons in China. Sci. Rep. 7, 3267 (2017). https://doi.org/10.1038/
s41598-017-03539-6
118. Zhou, L., Wang, Y., Long, X.E., Guo, J., Zhu, G.: High abundance and diversity of nitritedependent anaerobic methane-oxidizing bacteria in a paddy field profile. FEMS Microbiol.
Lett. 360, 33–41 (2014). https://doi.org/10.1111/1574-6968.12567
119. Zhou, S., Borjigin, S., Riya, S., Terada, A., Hosomi, M.: The relationship between anammox
and denitrification in the sediment of an inland river. Sci. Total Environ. 490, 1029–1036
(2014). https://doi.org/10.1016/j.scitotenv.2014.05.096