Environmental DNA (eDNA) Metabarcoding as a Sustainable Tool …
223
Primers
Short oligonucleotides that are
complimentary to a particular
region of the genome and are the
starting point of DNA replication
in PCR process.
Taxon
An organism identified to any
taxonomic rank; from kingdom
to species level.
References
Barnosky AD, Matzke N, Tomiya S, Wogan GO, Swartz B, Quental TB, Marshall C, McGuire JL,
Lindsey EL, Maguire KC (2011) Has the Earth’s sixth mass extinction already arrived? Nature
471:51–57
Bohmann K, Evans A, Gilbert MTP, Carvalho GR, Creer S, Knapp M, Douglas WY, De Bruyn M
(2014) Environmental DNA for wildlife biology and biodiversity monitoring. Trends Ecol Evol
29:358–367
Butchart SH, Walpole M, Collen B, Van Strien A, Scharlemann JP, Almond RE, Baillie JE, Bomhard
B, Brown C, Bruno J, Carpenter KE (2010) Global biodiversity: indicators of recent declines.
Science 328(5982):1164–1168
Bylemans J, Furlan EM, Hardy CM, McGuffie P, Lintermans M, Gleeson DM (2017) An environmental DNA based method for monitoring spawning activity: a case study, using the endangered
Macquarie perch (Macquaria australasica). Methods Ecol Evol 8:646–655
Carim KJ, Dysthe JCS, Young MK, McKelvey KS, Schwartz MK (2016) An environmental DNA
assay for detecting arctic grayling in the upper Missouri River basin, North America. Conserv
Genet Resour 8(3):197–199
Closek CJ, Starks H, Walz K, Boehm AB, Chavez F (2016) Anchovies to Whales: tracking vertebrate
biodiversity in Monterey Bay by metabarcoding environmental DNA (eDNA). In: AGU Fall
Meeting Abstracts
Collen B, Whitton F, Dyer EE, Baillie JEM, Cumberlidge N, Darwall WRT, Pollock C, Richman
NI, Soulsby AM, Böhm M (2014) Global patterns of freshwater species diversity, threat and
endemism. Glob Ecol Biogeogr 23:40–51
Darling JA, Mahon AR (2011) From molecules to management: adopting DNA-based methods for
monitoring biological invasions in aquatic environments. Environ Res 111:978–988
Dejean T, Valentini A, Duparc A, Pellier-Cuit S, Pompanon F, Taberlet P, Miaud C (2011) Persistence
of environmental DNA in freshwater ecosystems. PLoS ONE 6:e23398
Dejean T, Valentini A, Miquel C, Taberlet P, Bellemain E, Miaud C (2012) Improved detection of
an alien invasive species through environmental DNA barcoding: the example of the American
bullfrog Lithobates catesbeianus. J Appl Ecol 49:953–959
Dell’Era C, Landoni P (2014) Living lab: a methodology between user-centred design and participatory design. Creativity Innov Manage 23(2):137–154
Eva B, Harmony P, Thomas G, Francois G, Alice V, Claude M, Tony D (2016) Trails of river
monsters: detecting critically endangered Mekong giant catfish Pangasianodon gigas using environmental DNA. Global Ecol Conserv 7:148–156
Evans J, Karvonen A (2011) Living laboratories for sustainability: exploring the politics and
epistemology of urban transition. In: Cities and low carbon transitions. pp 126–141. Retrieved
from:
sustainability-exploring-thepolitics-and-epistemology-of-urban-transition(7ea05476-812748c7-b93c-ea17e78dd44d)/export.html#export
223
Primers
Short oligonucleotides that are
complimentary to a particular
region of the genome and are the
starting point of DNA replication
in PCR process.
Taxon
An organism identified to any
taxonomic rank; from kingdom
to species level.
References
Barnosky AD, Matzke N, Tomiya S, Wogan GO, Swartz B, Quental TB, Marshall C, McGuire JL,
Lindsey EL, Maguire KC (2011) Has the Earth’s sixth mass extinction already arrived? Nature
471:51–57
Bohmann K, Evans A, Gilbert MTP, Carvalho GR, Creer S, Knapp M, Douglas WY, De Bruyn M
(2014) Environmental DNA for wildlife biology and biodiversity monitoring. Trends Ecol Evol
29:358–367
Butchart SH, Walpole M, Collen B, Van Strien A, Scharlemann JP, Almond RE, Baillie JE, Bomhard
B, Brown C, Bruno J, Carpenter KE (2010) Global biodiversity: indicators of recent declines.
Science 328(5982):1164–1168
Bylemans J, Furlan EM, Hardy CM, McGuffie P, Lintermans M, Gleeson DM (2017) An environmental DNA based method for monitoring spawning activity: a case study, using the endangered
Macquarie perch (Macquaria australasica). Methods Ecol Evol 8:646–655
Carim KJ, Dysthe JCS, Young MK, McKelvey KS, Schwartz MK (2016) An environmental DNA
assay for detecting arctic grayling in the upper Missouri River basin, North America. Conserv
Genet Resour 8(3):197–199
Closek CJ, Starks H, Walz K, Boehm AB, Chavez F (2016) Anchovies to Whales: tracking vertebrate
biodiversity in Monterey Bay by metabarcoding environmental DNA (eDNA). In: AGU Fall
Meeting Abstracts
Collen B, Whitton F, Dyer EE, Baillie JEM, Cumberlidge N, Darwall WRT, Pollock C, Richman
NI, Soulsby AM, Böhm M (2014) Global patterns of freshwater species diversity, threat and
endemism. Glob Ecol Biogeogr 23:40–51
Darling JA, Mahon AR (2011) From molecules to management: adopting DNA-based methods for
monitoring biological invasions in aquatic environments. Environ Res 111:978–988
Dejean T, Valentini A, Duparc A, Pellier-Cuit S, Pompanon F, Taberlet P, Miaud C (2011) Persistence
of environmental DNA in freshwater ecosystems. PLoS ONE 6:e23398
Dejean T, Valentini A, Miquel C, Taberlet P, Bellemain E, Miaud C (2012) Improved detection of
an alien invasive species through environmental DNA barcoding: the example of the American
bullfrog Lithobates catesbeianus. J Appl Ecol 49:953–959
Dell’Era C, Landoni P (2014) Living lab: a methodology between user-centred design and participatory design. Creativity Innov Manage 23(2):137–154
Eva B, Harmony P, Thomas G, Francois G, Alice V, Claude M, Tony D (2016) Trails of river
monsters: detecting critically endangered Mekong giant catfish Pangasianodon gigas using environmental DNA. Global Ecol Conserv 7:148–156
Evans J, Karvonen A (2011) Living laboratories for sustainability: exploring the politics and
epistemology of urban transition. In: Cities and low carbon transitions. pp 126–141. Retrieved
from:
sustainability-exploring-thepolitics-and-epistemology-of-urban-transition(7ea05476-812748c7-b93c-ea17e78dd44d)/export.html#export