88
Larsen PE, Collart FR, Field D, Meyer F, Keegan KP, Henry CS, McGrath J, Quinn J, Gilbert JA
(2011) Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover
from a coastal marine metagenomic dataset. Microb Inf Exp 1:4
Laserson J, Jojic V, Koller D (2011) Genovo: de novo assembly for metagenomes. J Comput Biol
18:429–443
Lasken RS (2012) Genomic sequencing of uncultured microorganisms from single cells. Nat Rev
Microbiol 10:631–640. https://doi.org/10.1038/nrmicro2857
Leary DH, Hervey WJ, Li RW, Deschamps JR, Kusterbeck AW, Vora GJ (2012) Method development for metaproteomic analyses of marine biofilms. Anal Chem 84:4006–4013
Lecault V, White AK, Singhal A, Hansen CL (2012) Microfluidic single cell analysis: from promise to practice. Curr Opin Chem Biol 16:381–390
Lee KH (2001) Proteomics: a technology-driven and technology-limited discovery science.
Trends Biotechnol 19:217–222
Lee DH, Zo YG, Kim SJ (1996) Nonradioactive method to study genetic profiles of natural
bacterial communities by PCR–single-strand conformation polymorphism. Appl Environ
Microbiol 62:3112–3120
Lee CK, Barbier BK, Bottos EM, McDonald IR, Cary SC (2012) The Inter-Valley Soil Comparative
Survey: the ecology of Dry Valley edaphic microbial communities. ISME J 6:1046–1057
Lehman RM, Cambardella CA, Stott DE, Acosta-Martinez V, Manter DK, Buyer JS, Maul JE,
Smith JL, Collins HP, Halvorson JP (2015) Understanding and enhancing soil biological
health: the solution for reversing soil degradation. Sustainability 7:988–1027
Lehninger AL (1965) Bioenergetics: The molecular basis of biological energy transformations.
W. A. Benjamin, New York. pp xv, 258
Lester ED, Satomi M, Ponce A (2007) Microflora of extreme arid Atacama Desert soils. Soil Biol
Biochem 39:704–708
Leung K et al (2012) A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities. Proc Natl Acad Sci U S A
109:7665–7670
Leung ML, Wang Y, Waters J, Navin NES (2015) single nucleus exome sequencing. Genome Biol
16:55
Li W (2009) Analysis and comparison of very large metagenomes with fast clustering and functional annotation. BMC Bioinform 10:359. https://doi.org/10.1186/1471-2105-10-359
Li R, Zhu H, Ruan J, Qian W, Fang X, Shi Z, Li Y, Li S, Shan G, Kristiansen K, Li S, Yang H,
Wang J, Wang J (2010) De novo assembly of human genomes with massively parallel short
read sequencing. Genome Res 20:265–272
Li H-Y et al (2012) Endophytes and their role in phytoremediation. Fungal Divers 54:11–18
Li X, Sun J, Wang H, Li X, Wang J, Zhang H (2017) Changes in the soil microbial phospholipid fatty acid profile with depth in three soil types of paddy fields in China. Geoderma
290:69–74
Lichter P, Ledbetter SA, Ledbetter DH, Ward DC (1990) Fluorescence in situ hybridization with
Alu and L1 polymerase chain reaction probes for rapid characterization of human chromosomes in hybrid cell lines. Proc Natl Acad Sci U S A 87:6634–6638
Likar M, Stres B, Rusjan D, Potisek M, Regvar M (2017) Ecological and conventional viticulture
gives rise to distinct fungal and bacterial microbial communities in vineyard soils. Appl Soil
Ecol 113:86–95
Lin HH, Liao YC (2016) Accurate binning of metagenomic contigs via automated clustering
sequences using information of genomic signatures and marker genes. Sci Rep 6:24175
Liu B, Gibbons T, Ghodsi M, Treangen T, Pop M (2011) Accurate and fast estimation of taxonomic
profiles from metagenomic shotgun sequences. BMC Genomics 2:S4
Liu W, Sun J, Ding L, Luo Y, Chen M, Tang C (2013) Rhizobacteria (Pseudomonas sp. SB) assist
phytoremediation of oily-sludge-contaminated soil by tall fescue (Testuca arundinacea L.).
Plant Soil 371:533–542
References
Larsen PE, Collart FR, Field D, Meyer F, Keegan KP, Henry CS, McGrath J, Quinn J, Gilbert JA
(2011) Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover
from a coastal marine metagenomic dataset. Microb Inf Exp 1:4
Laserson J, Jojic V, Koller D (2011) Genovo: de novo assembly for metagenomes. J Comput Biol
18:429–443
Lasken RS (2012) Genomic sequencing of uncultured microorganisms from single cells. Nat Rev
Microbiol 10:631–640. https://doi.org/10.1038/nrmicro2857
Leary DH, Hervey WJ, Li RW, Deschamps JR, Kusterbeck AW, Vora GJ (2012) Method development for metaproteomic analyses of marine biofilms. Anal Chem 84:4006–4013
Lecault V, White AK, Singhal A, Hansen CL (2012) Microfluidic single cell analysis: from promise to practice. Curr Opin Chem Biol 16:381–390
Lee KH (2001) Proteomics: a technology-driven and technology-limited discovery science.
Trends Biotechnol 19:217–222
Lee DH, Zo YG, Kim SJ (1996) Nonradioactive method to study genetic profiles of natural
bacterial communities by PCR–single-strand conformation polymorphism. Appl Environ
Microbiol 62:3112–3120
Lee CK, Barbier BK, Bottos EM, McDonald IR, Cary SC (2012) The Inter-Valley Soil Comparative
Survey: the ecology of Dry Valley edaphic microbial communities. ISME J 6:1046–1057
Lehman RM, Cambardella CA, Stott DE, Acosta-Martinez V, Manter DK, Buyer JS, Maul JE,
Smith JL, Collins HP, Halvorson JP (2015) Understanding and enhancing soil biological
health: the solution for reversing soil degradation. Sustainability 7:988–1027
Lehninger AL (1965) Bioenergetics: The molecular basis of biological energy transformations.
W. A. Benjamin, New York. pp xv, 258
Lester ED, Satomi M, Ponce A (2007) Microflora of extreme arid Atacama Desert soils. Soil Biol
Biochem 39:704–708
Leung K et al (2012) A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities. Proc Natl Acad Sci U S A
109:7665–7670
Leung ML, Wang Y, Waters J, Navin NES (2015) single nucleus exome sequencing. Genome Biol
16:55
Li W (2009) Analysis and comparison of very large metagenomes with fast clustering and functional annotation. BMC Bioinform 10:359. https://doi.org/10.1186/1471-2105-10-359
Li R, Zhu H, Ruan J, Qian W, Fang X, Shi Z, Li Y, Li S, Shan G, Kristiansen K, Li S, Yang H,
Wang J, Wang J (2010) De novo assembly of human genomes with massively parallel short
read sequencing. Genome Res 20:265–272
Li H-Y et al (2012) Endophytes and their role in phytoremediation. Fungal Divers 54:11–18
Li X, Sun J, Wang H, Li X, Wang J, Zhang H (2017) Changes in the soil microbial phospholipid fatty acid profile with depth in three soil types of paddy fields in China. Geoderma
290:69–74
Lichter P, Ledbetter SA, Ledbetter DH, Ward DC (1990) Fluorescence in situ hybridization with
Alu and L1 polymerase chain reaction probes for rapid characterization of human chromosomes in hybrid cell lines. Proc Natl Acad Sci U S A 87:6634–6638
Likar M, Stres B, Rusjan D, Potisek M, Regvar M (2017) Ecological and conventional viticulture
gives rise to distinct fungal and bacterial microbial communities in vineyard soils. Appl Soil
Ecol 113:86–95
Lin HH, Liao YC (2016) Accurate binning of metagenomic contigs via automated clustering
sequences using information of genomic signatures and marker genes. Sci Rep 6:24175
Liu B, Gibbons T, Ghodsi M, Treangen T, Pop M (2011) Accurate and fast estimation of taxonomic
profiles from metagenomic shotgun sequences. BMC Genomics 2:S4
Liu W, Sun J, Ding L, Luo Y, Chen M, Tang C (2013) Rhizobacteria (Pseudomonas sp. SB) assist
phytoremediation of oily-sludge-contaminated soil by tall fescue (Testuca arundinacea L.).
Plant Soil 371:533–542
References