Table 19.5
A summary of the acdS
gene regulatory mechanisms that have been found in various phylogenetic groups
Bacteria
AcdR or similar
protein
AcdB
FNR
box
CRP
box
nifA
σ70 σ54 GntR LysR
MFS
family
References
Pseudomonas
sp. 6G5
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
Pseudomonas
sp. F17
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
P. putida
UW4
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
Enterobacter cloacae
strain CAL2
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
Bradyrhizobium japonicum
USDA
110
Yes
No
No
No
No
Yes No No
No
No
Singh et al. (2015)
Rhizobium leguminosarum bv Viciae
128C53K
Yes
No
No
No
No
Yes No No
No
No
Singh et al. (2015)
Burkholderia xenovorans
LB4000
Yes
No
No
No
No
No No No
Yes
No
Nascimento et al.
(2014)
Burkholderia
sp. CCGE1002
No
No
No
No
No
No No No
No
No
Nascimento et al.
(2014)
Burkholderiaphymatum
STM815
No
No
No
No
No
No No No
No
No
Nascimento et al.
(2014)
Variovorax parrdoxus
5C2
No
No
No
No
No
No No No
No
No
Singh et al. (2015)
Achromobacter xylosoxidans
A551
No
No
No
No
No
No No No
No
No
Singh et al. (2015)
Mesorhizobium loti
MAFF303099
No
No
No
No
Yes No No No
No
No
Nukui et al. (2006)
Many strains of Meiothermus
No
No
No
No
No
No No Yes
No
No
Nascimento et al.
(2014)
Many strains of Acinetobacter
No
No
No
No
No
No No No
Yes
No
Nascimento et al.
(2014)
(continued)
19 Biochemistry and Molecular Biology of the Enzyme ACC Deaminase
381
A summary of the acdS
gene regulatory mechanisms that have been found in various phylogenetic groups
Bacteria
AcdR or similar
protein
AcdB
FNR
box
CRP
box
nifA
σ70 σ54 GntR LysR
MFS
family
References
Pseudomonas
sp. 6G5
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
Pseudomonas
sp. F17
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
P. putida
UW4
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
Enterobacter cloacae
strain CAL2
Yes
Yes
Yes
Yes
No
No No No
No
No
Li and Glick
(2001)
Bradyrhizobium japonicum
USDA
110
Yes
No
No
No
No
Yes No No
No
No
Singh et al. (2015)
Rhizobium leguminosarum bv Viciae
128C53K
Yes
No
No
No
No
Yes No No
No
No
Singh et al. (2015)
Burkholderia xenovorans
LB4000
Yes
No
No
No
No
No No No
Yes
No
Nascimento et al.
(2014)
Burkholderia
sp. CCGE1002
No
No
No
No
No
No No No
No
No
Nascimento et al.
(2014)
Burkholderiaphymatum
STM815
No
No
No
No
No
No No No
No
No
Nascimento et al.
(2014)
Variovorax parrdoxus
5C2
No
No
No
No
No
No No No
No
No
Singh et al. (2015)
Achromobacter xylosoxidans
A551
No
No
No
No
No
No No No
No
No
Singh et al. (2015)
Mesorhizobium loti
MAFF303099
No
No
No
No
Yes No No No
No
No
Nukui et al. (2006)
Many strains of Meiothermus
No
No
No
No
No
No No Yes
No
No
Nascimento et al.
(2014)
Many strains of Acinetobacter
No
No
No
No
No
No No No
Yes
No
Nascimento et al.
(2014)
(continued)
19 Biochemistry and Molecular Biology of the Enzyme ACC Deaminase
381
