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324
C. Cuellar-Gempeler
microbiota. Nature 533:255–259
Ramirez KS, Snoek LB, Koorem K, Geisen S, Bloem LJ, ten Hooven F, Kostenko O, Krigas N,
Manrubia M, Caković D, van Raaij D, Tsiafouli MA, Vreš B, Čelik T, Weser C, Wilschut RA,
van der Putten WH (2019) Range-expansion effects on the belowground plant microbiome. Nat
Ecol Evol 3:604–611
Raymann K, Moran NA (2018) The role of the gut microbiome in health and disease of adult honey
bee workers. Curr Opin Insect Sci 26:97–104
Reese AT, Dunn RR (2018) Drivers of microbiome biodiversity: a review of general rules, feces,
and ignorance. mBio 9:e01294-18
Rodriguez Estrada AE, Hegeman A, Corby Kistler H, May G (2011) In vitro interactions between
Fusarium verticillioides and Ustilago maydis through real-time PCR and metabolic profiling.
Fungal Genet Biol 48:874–885
Rolig AS, Parthasarathy R, Burns AR, Bohannan BJM, Guillemin K (2015) Individual members of
the microbiota disproportionately modulate host innate immune responses. Cell Host Microbe
18:613–620
Sachs JL, Russell JE, Lil YE, Black KC, Lopez G, Patil AS (2010) Host control over infection and
proliferation of a cheater symbiont. J Evol Biol 23:1919–1927
Sandhya V, Ali SKZ, Grover M, Reddy G, Venkateswarlu B (2009) Alleviation of drought stress
effects in sunflower seedlings by the exopolysaccharides producing Pseudomonas putida strain
GAP-P45. Biol Fertil Soils 46:17–26
Schamberger GP, Diez-Gonzalez F (2002) Selection of recently isolated colicinogenic escherichia
coli strains inhibitory to Escherichia coli O157:H7. J Food Prot 65:1381–1387
Scheffer M, van Nes EH (2006) Self-organized similarity, the evolutionary emergence of groups of
similar species. Proc Natl Acad Sci USA 103:6230–6235
Scherer-Lorenzen M (2005) Biodiversity and ecosystem functioning: basic principles. In:
Barthlott W, Linsenmair KE, Porembski S (eds) Encyclopedia of life support systems
(EOLSS). EOLSS, Oxford
Schlaeppi K, Bulgarelli D (2014) The plant microbiome at work. Mol Plant Microbe Interact
28:212–217
Schmitz AM, Harrison MJ (2014) Signaling events during initiation of arbuscular mycorrhizal
symbiosis. J Integr Plant Biol 56:250–261
Schwartzman JA, Ruby EG (2016) A conserved chemical dialog of mutualism: lessons from squid
and vibrio. Microbes Infect 18:1–10
Shade A, Gregory Caporaso J, Handelsman J, Knight R, Fierer N (2013) A meta-analysis of
changes in bacterial and archaeal communities with time. ISME J 7:1493–1506
Shafquat A, Joice R, Simmons SL, Huttenhower C (2014) Functional and phylogenetic assembly of
microbial communities in the human microbiome. Trends Microbiol 22:261–266
Shin R, Suzuki M, Morishita Y (2002) Influence of intestinal anaerobes and organic acids on the
growth of enterohaemorrhagic Escherichia coli O157:H7. J Med Microbiol 51:201–206
Smith AH, Łukasik P, O’Connor MP, Lee A, Mayo G, Drott MT, Doll S, Tuttle R, Disciullo RA,
Messina A, Oliver KM, Russell JA (2015) Patterns, causes and consequences of defensive
microbiome dynamics across multiple scales. Mol Ecol 24:1135–1149
Sommer F, Bäckhed F (2013) The gut microbiota — masters of host development and physiology.
Nat Rev Microbiol 11:227–238
Song SJ, Lauber C, Costello EK, Lozupone CA, Humphrey G, Berg-Lyons D, Caporaso JG,
Knights D, Clemente JC, Nakielny S, Gordon JI, Fierer N, Knight R (2013) Cohabiting family
members share microbiota with one another and with their dogs. Elife 2:e00458
Spasojevic MJ, Catano CP, LaManna JA, Myers JA (2018) Integrating species traits into species
pools. Ecology 99:1265–1276
Sprent JI, Sutherland JM, De Faria SM, Dilworth MJ, Corby HDL, Becking JH, Materon LA,
Drozd JW, Bergersen FJ, Postgate JR (1987) Some aspects of the biology of nitrogen-fixing
organisms. Philos Trans Roy Soc Lond B Biol Sci 317:111–129
324
C. Cuellar-Gempeler