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9. M. Petrou, C. Petrou, Image processing: The Fundamentals. (John Wiley & Sons, 2010)
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transmission electron microscope images using markers. J. Struct. Biol. 133, 10–22 (2001)
11. H. Winkler, K.A. Taylor, Accurate marker-free alignment with simultaneous geometry
determination and reconstruction of tilt series in electron tomography. Ultramicroscopy 106
(3), 240–254 (2006)
12. S. Brandt, J. Heikkonen, Optimal method for the affine F-matrix and its uncertainty estimation
in the sense of both noise and outliers. In Proc. of the 8th IEEE Intl. Conf. on Computer
Vision (ICCV) (Vancouver, Canada, 2001), pp. 166–173
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dual-axis tilt series. J. Struct. Biol. 169(2), 192–199 (2010)
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alignment of cryo-sections. J. Struct. Biol. 159(3), 413–423 (2007)
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(Springer, 1992), pp. 197–204
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60(3), 393–410 (1995)
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Marco, J.M. Carazo, Marker-free image registration of electron tomography tilt-series. Bmc
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J. Nucl. Med. Mol. Imaging 36(1), 44–55 (2009)
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multi-modality image registration based on information theory. Inf. Process. Med. Imaging
263–274 (1995)
26. W.M. Wells, P. Viola, H. Atsumi, S. Nakajima, R. Kikinis, Multi-modal volume registration
by maximization of mutual information. Med. Image Anal. 1(1), 35–51 (1996)
27. D.G. Lowe, Distinctive image features from scale-invariant keypoints. Int. J. Comput. Vis. 60
(2), 91–110 (2004)
28. R. Han, F. Zhang, X. Wan, J.-J. Fernández, F. Sun, Z. Liu, A marker-free automatic alignment
method based on scale-invariant features. J. Struct. Biol. 186(1), 167–180 (2014)
29. E. Rosten, T. Drummond, Machine learning for high-speed corner detection. Comput.
Vision–ECCV 2006 (Springer, 2006), pp. 430–443
30. H. Bay, T. Tuytelaars, L. Van Gool, Surf: speeded up robust features. Proc. Computer
Vision-ECCV (2006)
206
A. Verguet et al.
Cheng, Electron counting and beam-induced motion correction enable near-atomic-resolution
single-particle cryo-EM. Nature Methods 10(6), 584–590 (2013)
9. M. Petrou, C. Petrou, Image processing: The Fundamentals. (John Wiley & Sons, 2010)
10. S. Brandt, J. Heikkonen, P. Engehardt, Multiphase method for automatic alignment of
transmission electron microscope images using markers. J. Struct. Biol. 133, 10–22 (2001)
11. H. Winkler, K.A. Taylor, Accurate marker-free alignment with simultaneous geometry
determination and reconstruction of tilt series in electron tomography. Ultramicroscopy 106
(3), 240–254 (2006)
12. S. Brandt, J. Heikkonen, Optimal method for the affine F-matrix and its uncertainty estimation
in the sense of both noise and outliers. In Proc. of the 8th IEEE Intl. Conf. on Computer
Vision (ICCV) (Vancouver, Canada, 2001), pp. 166–173
13. F. Cantele, E. Paccagnini, G. Pigino, P. Lupetti, S. Lanzavecchia, Simultaneous alignment of
dual-axis tilt series. J. Struct. Biol. 169(2), 192–199 (2010)
14. D. Castaño-Díez, A. Al-Amoudi, A.M. Glynn, A. Seybert, A.S. Frangakis, Fiducial-less
alignment of cryo-sections. J. Struct. Biol. 159(3), 413–423 (2007)
15. D. Castaño-Díez, A. Seybert, A.S. Frangakis, Tilt-series and electron microscope alignment
for the correction of the non-perpendicularity of beam and tilt-axis. J. Struct. Biol. 154, 195–
205 (2006)
16. M.C. Lawrence, Least-squares method of alignment using markers. Electron tomogr.
(Springer, 1992), pp. 197–204
17. P. Penczek, M. Marko, K. Buttle, J. Frank, Double-tilt electron tomography. Ultramicroscopy
60(3), 393–410 (1995)
18. C.O.S. Sorzano, C. Messaoudi, M. Eibauer, J.R. Bilbao-Castro, R. Hegerl, S. Nickell, S.
Marco, J.M. Carazo, Marker-free image registration of electron tomography tilt-series. Bmc
Bioinf. 10(1), 1 (2009)
19. P.J. Burt, E.H. Adelson, The Laplacian pyramid as a compact image code. Commun. IEEE
Trans. 31(4), 532–540 (1983)
20. E. Tadmor, S. Nezzar, L. Vese, A multiscale image representation using hierarchical (BV, L
2) decompositions. Multiscale Model. Simul. 2(4), 554–579 (2004)
21. S. Klein, M. Staring, J.P.W. Pluim, Evaluation of optimization methods for nonrigid medical
image registration using mutual information and B-splines. Image Process. IEEE Trans. 16
(12), 2879–2890 (2007)
22. V.R.S. Mani, S. Arivazhagan, J.J. Braino, Multimodal image fusion using multiresolution
techniques. Elixir Adv. Engg. Info. A. 55, 13160–13163 (2013)
23. D.C. Paquin, D. Levy, E. Schreibmann, L. Xing, Multiscale image registration. Mathematics
5 (2006)
24. P.J. Slomka, R.P. Baum, Multimodality image registration with software: state-of-the-art. Eur.
J. Nucl. Med. Mol. Imaging 36(1), 44–55 (2009)
25. A. Collignon, F. Maes, D. Delaere, D. Vandermeulen, P. Suetens, G. Marchal, Automated
multi-modality image registration based on information theory. Inf. Process. Med. Imaging
263–274 (1995)
26. W.M. Wells, P. Viola, H. Atsumi, S. Nakajima, R. Kikinis, Multi-modal volume registration
by maximization of mutual information. Med. Image Anal. 1(1), 35–51 (1996)
27. D.G. Lowe, Distinctive image features from scale-invariant keypoints. Int. J. Comput. Vis. 60
(2), 91–110 (2004)
28. R. Han, F. Zhang, X. Wan, J.-J. Fernández, F. Sun, Z. Liu, A marker-free automatic alignment
method based on scale-invariant features. J. Struct. Biol. 186(1), 167–180 (2014)
29. E. Rosten, T. Drummond, Machine learning for high-speed corner detection. Comput.
Vision–ECCV 2006 (Springer, 2006), pp. 430–443
30. H. Bay, T. Tuytelaars, L. Van Gool, Surf: speeded up robust features. Proc. Computer
Vision-ECCV (2006)
206
A. Verguet et al.