Sun M, Shen Y, Yang J, Cai X, Li H, Zhu Y, Jia B, Sun X (2020) miR535 negatively regulates cold
tolerance in rice. Mol Breed 40(1):1–2
Sunkar R, Zhu JK (2004) Novel and stress-regulated microRNAs and other small RNAs from
Arabidopsis. Plant Cell 16:2001–2019
Sunkar R, Kapoor A, Zhu JK (2006) Posttranscriptional induction of two Cu/Zn superoxide
dismutase genes in Arabidopsis is mediated by downregulation of miR398 and important for
oxidative stress tolerance. Plant Cell 18:2051–2065
Sunkar R, Chinnusamy V, Zhu J, Zhu JH (2007) Small RNAs as big players in plant abiotic stress
responses and nutrient deprivation. Trends Plant Sci 12:301–309
Szaker HM, Darkó É, Medzhiradszky AR, Janda T, Liu HC, Charng YY, Csorba T (2019) miR824/
AGAMOUS-LIKE16 module integrates recurring environmental heat stress changes to finetune post-stress development. Front Plant Sci 10:1454
Tang Z, Zhang L, Xu C, Yuan S, Zhang F, Zheng Y, Zhao C (2012) Uncovering small
RNA-mediated responses to cold stress in a wheat thermosensitive genic male-sterile line by
deep sequencing. Plant Physiol 159:721–738
Thiebaut F, Rojas CA, Almeida KL, Grativol C, Domiciano GC, Lamb CR, DE Almeida Engler JA,
Hemerly AS, Ferreira PC (2012) Regulation of miR319 during cold stress in sugarcane. Plant
Cell Environ 35:502–512
Trindade I, Capitão C, Dalmay T, Fevereiro MP, Dos Santos DM (2010) miR398 and miR408 are
up-regulated in response to water deficit in Medicago truncatula. Planta 231(3):705–716
Vakilian KA (2020) Determination of nitrogen deficiency-related microRNAs in plants using
fluorescence quenching of graphene oxide nanosheets. Mol Cell Probes:101576
Valdés-López O, Arenas-Huertero C, Ramírez M, Girard L, Sánchez F, Vance CP, Luis Reyes J,
Hernández G (2008) Essential role of MYB transcription factor: PvPHR1 and microRNA:
PvmiR399 in phosphorus-deficiency signalling in common bean roots. Plant Cell Environ
31:1834–1843
Vidal EA, Araus V, Lu C, Parry G, Green PJ, Coruzzi GM, Gutiérrez RA (2010) Nitrate-responsive
miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana.
Proc Natl Acad Sci U S A 107(9):4477–4482
Wang F, Perry SE (2013) Identification of direct targets of FUSCA3, a key regulator of Arabidopsis
seed development. Plant Physiol 161:1251–1264
Wang W, Vinocur B, Shoseyov O, Altman A (2004) Role of plant heat-shock proteins and
molecular chaperones in the abiotic stress response. Trends Plant Sci 9:244–252
Wang C, Huang W, Ying Y, Li S, Secco D, Tyerman S, Whelan J, Shou H (2012a) Functional
characterization of the rice SPX-MFS family reveals a key role of OsSPX-MFS1 in controlling
phosphate homeostasis in leaves. New Phytol 196(1):139–148
Wang Y, Sun F, Cao H, Peng H, Ni Z, Sun Q, Yao Y (2012b) TamiR159 directed wheat
TaGAMYB cleavage and its involvement in anther development and heat response. PLoS
One 7:e48445
Wang M, Wang Q, Zhang B (2013) Response of miRNAs and their targets to salt and drought
stresses in cotton (Gossypium hirsutum L.). Gene 530(1):26–32
Wang J, Sun N, Deng T, Zhang L, Zuo K (2014) Genome-wide cloning, identification, classification and functional analysis of cotton heat shock transcription factors in cotton (Gossypium
hirsutum). BMC Genomics 15(1):961
Wang Q, Liu N, Yang X, Tu L, Zhang X (2016) Small RNA-mediated responses to low-and hightemperature stresses in cotton. Sci Rep 6:35558
Wang R, Fang YN, Wu XM, Qing M, Li CC, Xie KD, Deng X, Guo WW (2020) The miR399CsUBC24 module regulates reproductive development and male fertility in citrus. Plant Physiol.
https://doi.org/10.1104/pp.20.00129
Weigel M, Varotto C, Pesaresi P, Finazzi G, Rappaport F, Salamini F, Leister D (2003) Plastocyanin is indispensable for photosynthetic electron flow in Arabidopsis thaliana. J Biol Chem 278
(33):31286–31289
8 Orchestration of MicroRNAs and Transcription Factors in the Regulation of Plant. . .
275
tolerance in rice. Mol Breed 40(1):1–2
Sunkar R, Zhu JK (2004) Novel and stress-regulated microRNAs and other small RNAs from
Arabidopsis. Plant Cell 16:2001–2019
Sunkar R, Kapoor A, Zhu JK (2006) Posttranscriptional induction of two Cu/Zn superoxide
dismutase genes in Arabidopsis is mediated by downregulation of miR398 and important for
oxidative stress tolerance. Plant Cell 18:2051–2065
Sunkar R, Chinnusamy V, Zhu J, Zhu JH (2007) Small RNAs as big players in plant abiotic stress
responses and nutrient deprivation. Trends Plant Sci 12:301–309
Szaker HM, Darkó É, Medzhiradszky AR, Janda T, Liu HC, Charng YY, Csorba T (2019) miR824/
AGAMOUS-LIKE16 module integrates recurring environmental heat stress changes to finetune post-stress development. Front Plant Sci 10:1454
Tang Z, Zhang L, Xu C, Yuan S, Zhang F, Zheng Y, Zhao C (2012) Uncovering small
RNA-mediated responses to cold stress in a wheat thermosensitive genic male-sterile line by
deep sequencing. Plant Physiol 159:721–738
Thiebaut F, Rojas CA, Almeida KL, Grativol C, Domiciano GC, Lamb CR, DE Almeida Engler JA,
Hemerly AS, Ferreira PC (2012) Regulation of miR319 during cold stress in sugarcane. Plant
Cell Environ 35:502–512
Trindade I, Capitão C, Dalmay T, Fevereiro MP, Dos Santos DM (2010) miR398 and miR408 are
up-regulated in response to water deficit in Medicago truncatula. Planta 231(3):705–716
Vakilian KA (2020) Determination of nitrogen deficiency-related microRNAs in plants using
fluorescence quenching of graphene oxide nanosheets. Mol Cell Probes:101576
Valdés-López O, Arenas-Huertero C, Ramírez M, Girard L, Sánchez F, Vance CP, Luis Reyes J,
Hernández G (2008) Essential role of MYB transcription factor: PvPHR1 and microRNA:
PvmiR399 in phosphorus-deficiency signalling in common bean roots. Plant Cell Environ
31:1834–1843
Vidal EA, Araus V, Lu C, Parry G, Green PJ, Coruzzi GM, Gutiérrez RA (2010) Nitrate-responsive
miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana.
Proc Natl Acad Sci U S A 107(9):4477–4482
Wang F, Perry SE (2013) Identification of direct targets of FUSCA3, a key regulator of Arabidopsis
seed development. Plant Physiol 161:1251–1264
Wang W, Vinocur B, Shoseyov O, Altman A (2004) Role of plant heat-shock proteins and
molecular chaperones in the abiotic stress response. Trends Plant Sci 9:244–252
Wang C, Huang W, Ying Y, Li S, Secco D, Tyerman S, Whelan J, Shou H (2012a) Functional
characterization of the rice SPX-MFS family reveals a key role of OsSPX-MFS1 in controlling
phosphate homeostasis in leaves. New Phytol 196(1):139–148
Wang Y, Sun F, Cao H, Peng H, Ni Z, Sun Q, Yao Y (2012b) TamiR159 directed wheat
TaGAMYB cleavage and its involvement in anther development and heat response. PLoS
One 7:e48445
Wang M, Wang Q, Zhang B (2013) Response of miRNAs and their targets to salt and drought
stresses in cotton (Gossypium hirsutum L.). Gene 530(1):26–32
Wang J, Sun N, Deng T, Zhang L, Zuo K (2014) Genome-wide cloning, identification, classification and functional analysis of cotton heat shock transcription factors in cotton (Gossypium
hirsutum). BMC Genomics 15(1):961
Wang Q, Liu N, Yang X, Tu L, Zhang X (2016) Small RNA-mediated responses to low-and hightemperature stresses in cotton. Sci Rep 6:35558
Wang R, Fang YN, Wu XM, Qing M, Li CC, Xie KD, Deng X, Guo WW (2020) The miR399CsUBC24 module regulates reproductive development and male fertility in citrus. Plant Physiol.
https://doi.org/10.1104/pp.20.00129
Weigel M, Varotto C, Pesaresi P, Finazzi G, Rappaport F, Salamini F, Leister D (2003) Plastocyanin is indispensable for photosynthetic electron flow in Arabidopsis thaliana. J Biol Chem 278
(33):31286–31289
8 Orchestration of MicroRNAs and Transcription Factors in the Regulation of Plant. . .
275