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water bathymetry, hydrooptics, and benthos mapping techniques in Australian and Caribbean
coastal environments. Limnol Oceanogr Methods 9:396–425
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community composition of coral reefs. Conserv Biol 15:892–902
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Satellite observation of Keppel Islands (Great Barrier Reef) 2002 coral bleaching using
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using spectral unmixing. J Appl Remote Sens 1:011501
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retrieval of bottom depth and reflectance using a semi-analytical model: a case study in
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coastal management. UNESCO, Paris
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hyperspectral remote sensing data: multiple discriminant function analysis and linear spectral
unmixing. Int J Remote Sens. doi:10.1080/01431161.2011.574162
Harborne AR, Mumby PJ, Zychaluk K, Hedley JD, Blackwell PG (2006) Modeling the beta
diversity of coral reefs. Ecology 87:2871–2881
Heege T, Hausknecht P, Kobryn H (2007) Hyperspectral seafloor mapping and direct bathymetry
calculation using HyMap data from the Ningaloo Reef and Rottnest Island areas in Western
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environments using the finite difference time domain (FDTD) method. Geo Marine Letters.
doi:10.1007/s00367-011-0265-8
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4 Hyperspectral Applications
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In: 7th Australasian remote sensing conference proceedings, pp 136–140, ARSC, Melbourne,
Australia
Dekker A, Byrne G, Brando V, Anstee J (2003) Hyperspectral mapping of intertidal rock
platform vegetation as a tool for adaptive management. CSIRO Land and Water, Canberra,
Australia
Dekker AG, Phinn SR, Anstee J, Bissett P, Brando VE, Casey B, Fearns P, Hedley J, Klonowski
W, Lee ZP, Lynch M, Lyons M, Mobley C, Roelfsema C (2011b) Inter-comparison of shallow
water bathymetry, hydrooptics, and benthos mapping techniques in Australian and Caribbean
coastal environments. Limnol Oceanogr Methods 9:396–425
Dustan P, Dobson E, Nelson G (2002) Landsat Thematic Mapper: detection of shifts in
community composition of coral reefs. Conserv Biol 15:892–902
Elvidge CD, Dietz JB, Berkelmans R, Andréfouët S, Skirving W, Strong AE, Tuttle BT (2004)
Satellite observation of Keppel Islands (Great Barrier Reef) 2002 coral bleaching using
IKONOS data. Coral Reefs 23:123–132
Enriquez S, Mendez ER, Iglesias-Prieto R (2005) Multiple scattering on coral skeletons enhances
light absorption by symbiotic algae. Limnol Oceanogr 50:1025–1032
ERDAS (2011). ERDAS IMAGINE. http://www.erdas.com
Exelis VIS, Exelis Visual Information Solutions (2012) ENVI—Environment for visualizing
images, Version 4.8
Fearns P, Rodrigo G, Klonowski W (2008) Combining hyperspectral and environmental
knowledge using probabilistic methods to produce shallow water habitat maps. In:
Proceedings of ocean optics XIX, Ciocco, Tuscany, Italy
Ferrier G, Trahair NS (1995) Evaluation of apparent surface reflectance estimation methodologies. Int J Remote Sens 16:2291–2297
Gao B-C, Montes MJ, Ahmad Z, Davis CO (2000) Atmospheric correction algorithm for
hyperspectral remote sensing of ocean color from space. Appl Opt 39:887–896
Goodman JA, Ustin SL (2007) Classification of benthic composition in a coral reef environment
using spectral unmixing. J Appl Remote Sens 1:011501
Goodman JA, Lee ZP, Ustin SL (2008) Influence of atmospheric and sea-surface corrections on
retrieval of bottom depth and reflectance using a semi-analytical model: a case study in
Kaneohe Bay, Hawaii. Appl Optics 47:F1–F11
Green EP, Mumby PJ, Edwards AJ, Clark CD (1996) A review of remote sensing for tropical
coastal resources assessment and management. Coastal Manage 24:1–40
Green EP, Mumby PJ, Edwards AJ, Clark CD (2000) Remote sensing handbook for tropical
coastal management. UNESCO, Paris
Hamylton S (2011) Estimating the coverage of coral reef benthic communities from airborne
hyperspectral remote sensing data: multiple discriminant function analysis and linear spectral
unmixing. Int J Remote Sens. doi:10.1080/01431161.2011.574162
Harborne AR, Mumby PJ, Zychaluk K, Hedley JD, Blackwell PG (2006) Modeling the beta
diversity of coral reefs. Ecology 87:2871–2881
Heege T, Hausknecht P, Kobryn H (2007) Hyperspectral seafloor mapping and direct bathymetry
calculation using HyMap data from the Ningaloo Reef and Rottnest Island areas in Western
Australia. In: Proceedings of the 5th EARSel Workshop on imaging spectroscopy, Bruges,
23–25 April, pp 1–8
Hedley JD (2008) A three-dimensional radiative transfer model for shallow water environments.
Opt Express 16:21887–21902
Hedley JD (2011a) Modelling the optical properties of suspended particulate matter of coral reef
environments using the finite difference time domain (FDTD) method. Geo Marine Letters.
doi:10.1007/s00367-011-0265-8
Hedley JD (2011b) PlanarRad user manual. http://www.planarrad.com
Hedley JD, Enríquez S (2010) Optical properties of canopies of the tropical seagrass Thalassia
testudinum estimated by a three-dimensional radiative transfer model. Limnol Oceanogr
55:1537–1550
4 Hyperspectral Applications
109