7 Genomic Approaches in Aquaculture and Fisheries
279
Ni D, Song L, Wu L et al (2007) Molecular cloning and mRNA expression of peptidoglycan
recognition protein (PGRP) gene in bay scallop (Argopecten irradians, Lamarck 1819). Dev
Comp Immunol 31:548–558
Nielsen EE, Hansen MM, Schmidt C et al (2001) Determining the population origin of individual
cod in the Northeast Atlantic. Nature 413:272
Nielsen EE, Hansen MM, Ruzzante DE et al (2003) Evidence of a hybrid-zone in Atlantic cod
(Gadus morhua) in the Baltic and the Danish Belt Sea, revealed by individual admixture
analysis. Mol Ecol 12:1497–1508
Nielsen EE, Hansen MM, Meldrup D (2006) Evidence of microsatellite hitch-hiking selection in
Atlantic cod (Gadus morhua L.): Implications for inferring population structure in non-model
organisms. Mol Ecol 15:3219–3229
Nielsen EE, MacKenzie BR, Magnussen E et al (2007) Historical analysis of Pan I in Atlantic cod
(Gadus morhua): temporal stability of allele frequencies in the southeastern part of the species
distribution. Can J Fish Aquat Sci 64:1448–1455
Nielsen EE, Hansen MM (2008) Waking the dead: the value of population genetic analyses of
historical samples. Fish Fish 9:450–461
Nikula R, Strelkov P, Vainola R (2008) A broad transition zone between an inner Baltic hybrid
swarm and a pure North Sea subspecies of Macoma balthica (Mollusca, Bivalvia). Mol Ecol
17:1505–1522
Nordstrom JL, Vickery MC, Blackstone GM et al (2007) Development of a multiplex real-time
PCR assay with an internal amplification control for the detection of total and pathogenic Vibrio
parahaemolyticus bacteria in oysters. Appl Environ Microbiol 73:5840–5847
Norris AT, Bradley DG, Cunningham EP (1999) Microsatellite genetic variation between
and within farmed and wild Atlantic salmon (Salmo salar) populations. Aquaculture 180:
247–264
Norris AT, Bradley DG, Cunningham EP (2000) Parentage and relatedness determination in farmed
Atlantic salmon (Salmo salar) using microsatellite markers. Aquaculture 182:73–83
Nottage AS, Birkbeck TH (1990) Interactions between different strains of Vibrio alginolyticus and
hemolymph fractions from adult Mytilus edulis. J Invertebr Pathol 56:15–19
Nürnberger T, Brunner F, Kemmerling B et al (2004) Innate immunity in plants and animals:
striking similarities and obvious differences. Immunol Rev 198:249–266
Nygaard V, Liu F, Holden M et al (2008) Validation of oligoarrays for quantitative exploration of
the transcriptome. BMC Genomics 9:258
Oleksiak MF, Churchill GA, Crawford DL (2002) Variation in gene expression within and among
natural populations. Nat Genet 32:261–266
Oliver JL, Gaffney PM, Allen SK et al (2000) Protease inhibitory activity in selectively bred
families of eastern oysters. J Aquat Anim Health 12:136–145
Ommen B, Groten JP (2004) Nutrigenomics in efficacy and safety evaluation of food components.
World Rev Nutr Diet 93:134–152
Orr HA (2005) The genetic theory of adaptation: a brief history. Nat Rev genet 6:119–127
Ozaki A, Sakamoto T, Khoo S et al (2001) Quantitative trait loci (QTLs) associated with
resistance/susceptibility to infectious pancreatic necrosis virus (IPNV) in rainbow trout
(Oncorhynchus mykiss). Mol Genet Genomics 265:23–31
Paillard C, Le Roux F, Borrego JJ (2004) Bacterial disease in marine bivalves, a review of recente
studies: Trends and evolution. Aquat Living Resour 17:477–498
Palumbi SR (2004) Marine reserves and ocean neighborhoods: The spatial scale of marine
populations and their management. Annu Rev Environ Resour 29:31–68
Pampoulie C, Jorundsdottir TD, Steinarsson A et al (2006) Genetic comparison of experimental
farmed strains and wild Icelandic populations of Atlantic cod (Gadus morhua L.). Aquaculture
261:556–564
Panicker G, Vickery MC, Bej AK (2004) Multiplex PCR detection of clinical and environmental
strains of Vibrio vulnificus in shellfish. Can J Microbiol 50:911–922
279
Ni D, Song L, Wu L et al (2007) Molecular cloning and mRNA expression of peptidoglycan
recognition protein (PGRP) gene in bay scallop (Argopecten irradians, Lamarck 1819). Dev
Comp Immunol 31:548–558
Nielsen EE, Hansen MM, Schmidt C et al (2001) Determining the population origin of individual
cod in the Northeast Atlantic. Nature 413:272
Nielsen EE, Hansen MM, Ruzzante DE et al (2003) Evidence of a hybrid-zone in Atlantic cod
(Gadus morhua) in the Baltic and the Danish Belt Sea, revealed by individual admixture
analysis. Mol Ecol 12:1497–1508
Nielsen EE, Hansen MM, Meldrup D (2006) Evidence of microsatellite hitch-hiking selection in
Atlantic cod (Gadus morhua L.): Implications for inferring population structure in non-model
organisms. Mol Ecol 15:3219–3229
Nielsen EE, MacKenzie BR, Magnussen E et al (2007) Historical analysis of Pan I in Atlantic cod
(Gadus morhua): temporal stability of allele frequencies in the southeastern part of the species
distribution. Can J Fish Aquat Sci 64:1448–1455
Nielsen EE, Hansen MM (2008) Waking the dead: the value of population genetic analyses of
historical samples. Fish Fish 9:450–461
Nikula R, Strelkov P, Vainola R (2008) A broad transition zone between an inner Baltic hybrid
swarm and a pure North Sea subspecies of Macoma balthica (Mollusca, Bivalvia). Mol Ecol
17:1505–1522
Nordstrom JL, Vickery MC, Blackstone GM et al (2007) Development of a multiplex real-time
PCR assay with an internal amplification control for the detection of total and pathogenic Vibrio
parahaemolyticus bacteria in oysters. Appl Environ Microbiol 73:5840–5847
Norris AT, Bradley DG, Cunningham EP (1999) Microsatellite genetic variation between
and within farmed and wild Atlantic salmon (Salmo salar) populations. Aquaculture 180:
247–264
Norris AT, Bradley DG, Cunningham EP (2000) Parentage and relatedness determination in farmed
Atlantic salmon (Salmo salar) using microsatellite markers. Aquaculture 182:73–83
Nottage AS, Birkbeck TH (1990) Interactions between different strains of Vibrio alginolyticus and
hemolymph fractions from adult Mytilus edulis. J Invertebr Pathol 56:15–19
Nürnberger T, Brunner F, Kemmerling B et al (2004) Innate immunity in plants and animals:
striking similarities and obvious differences. Immunol Rev 198:249–266
Nygaard V, Liu F, Holden M et al (2008) Validation of oligoarrays for quantitative exploration of
the transcriptome. BMC Genomics 9:258
Oleksiak MF, Churchill GA, Crawford DL (2002) Variation in gene expression within and among
natural populations. Nat Genet 32:261–266
Oliver JL, Gaffney PM, Allen SK et al (2000) Protease inhibitory activity in selectively bred
families of eastern oysters. J Aquat Anim Health 12:136–145
Ommen B, Groten JP (2004) Nutrigenomics in efficacy and safety evaluation of food components.
World Rev Nutr Diet 93:134–152
Orr HA (2005) The genetic theory of adaptation: a brief history. Nat Rev genet 6:119–127
Ozaki A, Sakamoto T, Khoo S et al (2001) Quantitative trait loci (QTLs) associated with
resistance/susceptibility to infectious pancreatic necrosis virus (IPNV) in rainbow trout
(Oncorhynchus mykiss). Mol Genet Genomics 265:23–31
Paillard C, Le Roux F, Borrego JJ (2004) Bacterial disease in marine bivalves, a review of recente
studies: Trends and evolution. Aquat Living Resour 17:477–498
Palumbi SR (2004) Marine reserves and ocean neighborhoods: The spatial scale of marine
populations and their management. Annu Rev Environ Resour 29:31–68
Pampoulie C, Jorundsdottir TD, Steinarsson A et al (2006) Genetic comparison of experimental
farmed strains and wild Icelandic populations of Atlantic cod (Gadus morhua L.). Aquaculture
261:556–564
Panicker G, Vickery MC, Bej AK (2004) Multiplex PCR detection of clinical and environmental
strains of Vibrio vulnificus in shellfish. Can J Microbiol 50:911–922