7 Genomic Approaches in Aquaculture and Fisheries
273
Huvet A, Herpin A, Degremont L et al (2004) The identification of genes from the oyster
Crassostrea gigas that are differentially expressed in progeny exhibiting opposed susceptibility
to summer mortality. Gene 343:211–220
Huvet A, Jeffroy F, Fabioux C et al (2008) Association among growth, food consumption-related
traits and amylase gene polymorphism in the Pacific oyster Crassostrea gigas. Anim Genet
39:662–665
Itoh N, Takahashi KG (2008) Distribution of multiple peptidoglycan recognition proteins in the
tissues of Pacific oyster, Crassostrea gigas. Comp Biochem Physiol B-Biochem Mol Biol
150:409–417
Izquierdo MS, Robaina L, Juárez E et al (2008) Regulation of growth, fatty acid composition and
delta 6 desaturase expression by dietary lipids in gilthead seabream larvae (Sparus aurata).
Fish Physiol Biochem 34:117–127
Janeway CA, Medzhitov R (2002) Innate immune recognition. Annu Rev Immunol 20:197–216
Jenny MJ, Warr GW, Ringwood AH et al (2006) Regulation of metallothionein genes in the
American oyster (Crassostrea virginica): ontogeny and differential expression in response to
different stressors. Gene 379:156–165
Jenny MJ, Chapman RW, Mancia A (2007) A cDNA microarray for Crassostrea virginica and C.
gigas. Mar Biotechnol 9:577–591
Jeyasekaran G, Karunasagar I (1996) Incidence of Listeria spp. in tropical fish. Int J Food
Microbiol 31:333–340
Johnston IA (1999) Muscle development and growth: potential implications for flesh quality in
fish. Aquaculture 177:99–115
Johnston IA, Manthri S, Alderson R et al (2002) Effects of dietary protein level on muscle cellularity and flesh quality in Atlantic salmon with particular reference to gaping. Aquaculture
210:259–283
Johnston IA, Alderson R, Sandham C et al (2004) Muscle fibre density in relation to the colour
and texture of smoked Atlantic salmon (Salmo salar L.). Aquaculture 189:335–349
Johnston IA (2006) Environment and plasticity of myogenesis in teleost fish. J Exp Biol 209:2249–
2264
Jones GP, Planes S, Thorrold SR (2005) Coral reef fish larvae settle close to home. Curr Biol
15:1314–1318
Joost S, Bonin A, Bruford W et al (2007) A spatial analysis method (SAM) to detect candidate loci
for selection: towards a landscape genomics approach to adaptation. Mol Ecol 16:3955–3969
Jordal A-EO, Torstensen BE, Tsoi S et al (2005) Dietary rapeseed oil affects the expression
of genes involved in hepatic lipid metabolism in Atlantic salmon (Salmo salar L.). J Nutr
135:2355–2361
Jørgensen HBH, Hansen MM, Bekkevold D et al (2005) Marine landscapes and population genetic
structure of herring (Clupea harengus L.) in the Baltic Sea. Mol Ecol 14:3219–3234
Jørgensen HBH, Pertoldi C, Hansen MM et al (2008) Genetic and environmental correlates of
morphological variation in a marine fish: the case of Baltic Sea herring (Clupea harengus).
Can J Fish Aquat Sci 65:389–400
Kadereit B, Kumar P, Wang WJ et al (2008) Evolutionarily conserved gene family important for
fat storage. Proc Natl Acad Sci USA 105:84–99
Kalbe M, Kurtz J (2006) Local differences in immunocompetence reflect resistance of sticklebacks
against the eye fluke Diplostomum pseudospathaceum. Parasitology 132:105–116
Kang YS, Kim YM, Park KI et al (2006) Analysis of EST and lectin expressions in hemocytes of
Manila clams (Ruditapes philippinarum) (Bivalvia: Mollusca) infected with Perkinsus olseni.
Dev Comp Immunol 30:1119–1131
Kang JH, Kim WJ, Lee WJ (2008) Genetic linkage map of olive flounder, Paralichthys olivaceus.
Int J Biol Sci 4:143–149
Karlsson S, Renshaw MA, Rexroad CE et al (2008) PCR primers for 100 microsatellites in red
drum (Sciaenops ocellatus). Mol Ecol Resour 8:393–398
273
Huvet A, Herpin A, Degremont L et al (2004) The identification of genes from the oyster
Crassostrea gigas that are differentially expressed in progeny exhibiting opposed susceptibility
to summer mortality. Gene 343:211–220
Huvet A, Jeffroy F, Fabioux C et al (2008) Association among growth, food consumption-related
traits and amylase gene polymorphism in the Pacific oyster Crassostrea gigas. Anim Genet
39:662–665
Itoh N, Takahashi KG (2008) Distribution of multiple peptidoglycan recognition proteins in the
tissues of Pacific oyster, Crassostrea gigas. Comp Biochem Physiol B-Biochem Mol Biol
150:409–417
Izquierdo MS, Robaina L, Juárez E et al (2008) Regulation of growth, fatty acid composition and
delta 6 desaturase expression by dietary lipids in gilthead seabream larvae (Sparus aurata).
Fish Physiol Biochem 34:117–127
Janeway CA, Medzhitov R (2002) Innate immune recognition. Annu Rev Immunol 20:197–216
Jenny MJ, Warr GW, Ringwood AH et al (2006) Regulation of metallothionein genes in the
American oyster (Crassostrea virginica): ontogeny and differential expression in response to
different stressors. Gene 379:156–165
Jenny MJ, Chapman RW, Mancia A (2007) A cDNA microarray for Crassostrea virginica and C.
gigas. Mar Biotechnol 9:577–591
Jeyasekaran G, Karunasagar I (1996) Incidence of Listeria spp. in tropical fish. Int J Food
Microbiol 31:333–340
Johnston IA (1999) Muscle development and growth: potential implications for flesh quality in
fish. Aquaculture 177:99–115
Johnston IA, Manthri S, Alderson R et al (2002) Effects of dietary protein level on muscle cellularity and flesh quality in Atlantic salmon with particular reference to gaping. Aquaculture
210:259–283
Johnston IA, Alderson R, Sandham C et al (2004) Muscle fibre density in relation to the colour
and texture of smoked Atlantic salmon (Salmo salar L.). Aquaculture 189:335–349
Johnston IA (2006) Environment and plasticity of myogenesis in teleost fish. J Exp Biol 209:2249–
2264
Jones GP, Planes S, Thorrold SR (2005) Coral reef fish larvae settle close to home. Curr Biol
15:1314–1318
Joost S, Bonin A, Bruford W et al (2007) A spatial analysis method (SAM) to detect candidate loci
for selection: towards a landscape genomics approach to adaptation. Mol Ecol 16:3955–3969
Jordal A-EO, Torstensen BE, Tsoi S et al (2005) Dietary rapeseed oil affects the expression
of genes involved in hepatic lipid metabolism in Atlantic salmon (Salmo salar L.). J Nutr
135:2355–2361
Jørgensen HBH, Hansen MM, Bekkevold D et al (2005) Marine landscapes and population genetic
structure of herring (Clupea harengus L.) in the Baltic Sea. Mol Ecol 14:3219–3234
Jørgensen HBH, Pertoldi C, Hansen MM et al (2008) Genetic and environmental correlates of
morphological variation in a marine fish: the case of Baltic Sea herring (Clupea harengus).
Can J Fish Aquat Sci 65:389–400
Kadereit B, Kumar P, Wang WJ et al (2008) Evolutionarily conserved gene family important for
fat storage. Proc Natl Acad Sci USA 105:84–99
Kalbe M, Kurtz J (2006) Local differences in immunocompetence reflect resistance of sticklebacks
against the eye fluke Diplostomum pseudospathaceum. Parasitology 132:105–116
Kang YS, Kim YM, Park KI et al (2006) Analysis of EST and lectin expressions in hemocytes of
Manila clams (Ruditapes philippinarum) (Bivalvia: Mollusca) infected with Perkinsus olseni.
Dev Comp Immunol 30:1119–1131
Kang JH, Kim WJ, Lee WJ (2008) Genetic linkage map of olive flounder, Paralichthys olivaceus.
Int J Biol Sci 4:143–149
Karlsson S, Renshaw MA, Rexroad CE et al (2008) PCR primers for 100 microsatellites in red
drum (Sciaenops ocellatus). Mol Ecol Resour 8:393–398