7 Genomic Approaches in Aquaculture and Fisheries
271
Gueguen Y, Cadoret JP, Flament D et al (2003) Immune gene discovery by expressed sequence
tags generated from hemocytes of the bacteria-challenged oyster, Crassostrea gigas. Gene 303:
139–145
Gueguen Y, Herpin A, Aumelas A et al (2006) Characterization of a Defensin from the oyster Crassostrea gigas: Recombinant production, folding, solution structure, antimicrobial
activities, and gene expression. J Biol Chem 281:313–323
Guelinckx J, Maes J, Geysen B et al (2008) Estuarine recruitment of a marine goby reconstructed
with an isotopic clock. Oecologia 157:41–52
Guerard F, Sellos D, Le Ga Y (2005) Fish and shellfish upgrading, traceability. Mar Biotechnol
96:127–163
Guinand B, Lemaire C, Bonhomme F (2004) How to detect polymorphisms undergoing selection in
marine fishes? A review of methods and case studies, including flatfishes. J Sea Res 51:167–182
Gunnarsson L, Kristiansson E, Forlin L et al (2007) Sensitive and robust gene expression changes
in fish exposed to estrogen: a microarray approach. BMC Genomics 8:149
Gupta PK (2008) Ultrafast and low-cost DNA-sequencing methods for applied genomics research.
Proc Natl Acad Sci USA 78:91–102
Hanchuan D, Liangqi L, Guang D (2006) Molecular cloning of the obese gene from Cyprinus
carpio and its expression in Escherichia coli. Front Biol China 1:50–55
Hansen MM, Kenchington E, Nielsen EE (2001) Assigning individual fish to populations using
microsatellite DNA markers: Methods and applications. Fish Fish 2:93–112
Hanski IA, Gilpin ME (1997) Metapopulation biology: ecology, genetics and evolution. Academic
Press, New York
Hanski IA, Gaggiotti OE (2004) Ecology, genetics, and evolution of metapopulations. Elsevier
Academic Press, San Diego
Harlizius B, van Wijk R, Merks JWM (2004) Genomics for food safety and sustainable animal
production. J Biotechnol 113:33–42
Håstein T, Hill BJ, Berthe F et al (2001) Traceability of aquatic animals. Rev Sci Tech 20:564–583
Håstein T, Scarfe AD, Lund VL (2005) Science-based assessment of welfare: aquatic animals. Rev
Sci Tech 24:529–547
Hauser L, Adcock GJ, Smith PJ et al (2002) Loss of microsatellite diversity and low effective
population size in an overexploited population of New Zealand snapper (Pagrus auratus). Proc
Nat Acad Sci USA 99:11742–11747
Hawke JP, McWhorter AC, Steigerwalt AG et al (1981) Edwardsiella ictaluri sp. nov., the causative
agent of enteric septicemia of catfish. Int J Syst Bacteriol 31:396–400
Hayes B, Sonesson AK, Gjerde B (2005) Evaluation of three strategies using DNA markers for
traceability in aquaculture species. Aquaculture 250:70–81
Hayes B, He J, Moen T et al (2006) Use of molecular markers to maximise diversity of flounder
populations for aquaculture breeding programs. Aquaculture 255:573–578
Hayes B, Lærdahl JK, Lien S et al (2007) An extensive resource of single nucleotide polymorphism
markers associated with Atlantic salmon (Salmo salar) expressed sequences. Aquaculture
265:82–90
He XP, Xu XW, Zhao SH et al (2008) Investigation of Lpin1 as a candidate gene for fat deposition
in pigs. Mol Biol Rep DOI 10.1007/s11033-008-9294-4
Hedgecock D (1994) Does variance in reproductive success limit effective population sizes of
marine organisms? In: Beaumont AR (ed) Genetics and evolution of aquatic organisms.
Chapman and Hall, London
Hedgecock D, Li G, Hubert S et al (2004) Widespread null alleles and poor cross-species amplification of microsatellite DNA loci cloned from the Pacific oyster, Crassostrea gigas. J Shellfish
Res 23:379–385
Hedgecock D, Davis J (2007) Heterosis for yield and crossbreeding of the Pacific oyster
Crassostrea gigas. Aquaculture 272:S17–S29
Hedgecock D, Lin JZ, DeCola S (2007) Transcriptomic analysis of growth heterosis in larval
Pacific oysters (Crassostrea gigas). Proc Natl Acad Sci USA 104:2313–2318
271
Gueguen Y, Cadoret JP, Flament D et al (2003) Immune gene discovery by expressed sequence
tags generated from hemocytes of the bacteria-challenged oyster, Crassostrea gigas. Gene 303:
139–145
Gueguen Y, Herpin A, Aumelas A et al (2006) Characterization of a Defensin from the oyster Crassostrea gigas: Recombinant production, folding, solution structure, antimicrobial
activities, and gene expression. J Biol Chem 281:313–323
Guelinckx J, Maes J, Geysen B et al (2008) Estuarine recruitment of a marine goby reconstructed
with an isotopic clock. Oecologia 157:41–52
Guerard F, Sellos D, Le Ga Y (2005) Fish and shellfish upgrading, traceability. Mar Biotechnol
96:127–163
Guinand B, Lemaire C, Bonhomme F (2004) How to detect polymorphisms undergoing selection in
marine fishes? A review of methods and case studies, including flatfishes. J Sea Res 51:167–182
Gunnarsson L, Kristiansson E, Forlin L et al (2007) Sensitive and robust gene expression changes
in fish exposed to estrogen: a microarray approach. BMC Genomics 8:149
Gupta PK (2008) Ultrafast and low-cost DNA-sequencing methods for applied genomics research.
Proc Natl Acad Sci USA 78:91–102
Hanchuan D, Liangqi L, Guang D (2006) Molecular cloning of the obese gene from Cyprinus
carpio and its expression in Escherichia coli. Front Biol China 1:50–55
Hansen MM, Kenchington E, Nielsen EE (2001) Assigning individual fish to populations using
microsatellite DNA markers: Methods and applications. Fish Fish 2:93–112
Hanski IA, Gilpin ME (1997) Metapopulation biology: ecology, genetics and evolution. Academic
Press, New York
Hanski IA, Gaggiotti OE (2004) Ecology, genetics, and evolution of metapopulations. Elsevier
Academic Press, San Diego
Harlizius B, van Wijk R, Merks JWM (2004) Genomics for food safety and sustainable animal
production. J Biotechnol 113:33–42
Håstein T, Hill BJ, Berthe F et al (2001) Traceability of aquatic animals. Rev Sci Tech 20:564–583
Håstein T, Scarfe AD, Lund VL (2005) Science-based assessment of welfare: aquatic animals. Rev
Sci Tech 24:529–547
Hauser L, Adcock GJ, Smith PJ et al (2002) Loss of microsatellite diversity and low effective
population size in an overexploited population of New Zealand snapper (Pagrus auratus). Proc
Nat Acad Sci USA 99:11742–11747
Hawke JP, McWhorter AC, Steigerwalt AG et al (1981) Edwardsiella ictaluri sp. nov., the causative
agent of enteric septicemia of catfish. Int J Syst Bacteriol 31:396–400
Hayes B, Sonesson AK, Gjerde B (2005) Evaluation of three strategies using DNA markers for
traceability in aquaculture species. Aquaculture 250:70–81
Hayes B, He J, Moen T et al (2006) Use of molecular markers to maximise diversity of flounder
populations for aquaculture breeding programs. Aquaculture 255:573–578
Hayes B, Lærdahl JK, Lien S et al (2007) An extensive resource of single nucleotide polymorphism
markers associated with Atlantic salmon (Salmo salar) expressed sequences. Aquaculture
265:82–90
He XP, Xu XW, Zhao SH et al (2008) Investigation of Lpin1 as a candidate gene for fat deposition
in pigs. Mol Biol Rep DOI 10.1007/s11033-008-9294-4
Hedgecock D (1994) Does variance in reproductive success limit effective population sizes of
marine organisms? In: Beaumont AR (ed) Genetics and evolution of aquatic organisms.
Chapman and Hall, London
Hedgecock D, Li G, Hubert S et al (2004) Widespread null alleles and poor cross-species amplification of microsatellite DNA loci cloned from the Pacific oyster, Crassostrea gigas. J Shellfish
Res 23:379–385
Hedgecock D, Davis J (2007) Heterosis for yield and crossbreeding of the Pacific oyster
Crassostrea gigas. Aquaculture 272:S17–S29
Hedgecock D, Lin JZ, DeCola S (2007) Transcriptomic analysis of growth heterosis in larval
Pacific oysters (Crassostrea gigas). Proc Natl Acad Sci USA 104:2313–2318