7 Genomic Approaches in Aquaculture and Fisheries
269
Emmerich R, Weibel E (1894) Ueber eine durch bakterien erzengte seuche unter den forellen. Arch
Hyg Bakteriol 21:1–21
Endler JA (1986) Natural selection in the wild. Princeton University Press, Princeton
Escoubas J-M, Briant L, Montagnani C et al (1999) Oyster IKK-like protein shares structural and
functional properties with its mammalian homologues. FEBS Lett 453:293–298
Espe M, Ruohonen K, Bjørnevik M et al (2004) Interactions between ice storage time, collagen
composition, gaping and textural properties in farmed salmon muscle harvested at different
times of the year. Aquaculture 240:489–504
Ewart KV, Belanger JC, Williams J et al (2005) Identification of genes differentially expressed in
Atlantic salmon (Salmo salar) in response to infection by Aeromonas salmonicida using cDNA
microarray technology. Dev Comp Immunol 29:333–347
Faisal M, MacIntyre EA, Adham KG et al (1998) Evidence for the presence of protease inhibitors
in Eastern (Crassostrea virginica) and Pacific (Crassostrea gigas) oysters. Comp Biochem
Physiol B-Biochem Mol Biol 121:161–168
Faisal M, Schafhauser DY, Garreis KA et al (1999) Isolation and characterization of Perkinsus
marinus proteases using bacitracin-sepharose affinity chromatography. Comp Biochem Physiol
B-Biochem Mol Biol 123:417–426
Falch E, Rustad T, Jonsdottir R et al (2006) Geographical and seasonal differences in lipid composition and relative weight of by-products from gadiform species. J Food Compos Anal
19:727–736
Faliex E, Da Silva C, Simon G et al (2008) Dynamic expression of immune response genes in
the sea bass, Dicentrarchus labrax, experimentally infected with the monogenean Diplectanum
aequans. Fish Shellfish Immunol 24:759–767
Fawcett LB, Tripp MR (1994) Chemotaxis of Mercenaria mercenaria hemocytes to bacteria in
vitro. J Invertebr Pathol 63:275–284
Feder ME, Mitchell-Olds T (2003) Evolutionary and ecological functional genomics. Nat Rev
Genet 4:651–657
Fernandes JMO, Mackenzie MG, Elgar G et al (2005) A genomic approach to reveal novel genes
associated with myotube formation in the model teleost, Takifugu rubripes. Physiol Genomics
22:327–338
Ferraresso S, Vitulo N, Mininni AN et al (2008) Development and validation of a gene
expression oligo microarray for the gilthead sea bream (Sparus aurata). BMC Genomics 9:580
Fishback AG, Danzmann RG, Ferguson MM et al (2002) Estimates of genetic parameters and
genotype by environment interactions for growth traits of rainbow trout (Oncorhynchus mykiss)
as inferred using molecular pedigrees. Aquaculture 206:137–150
Ford SE, Haskin HH (1987) Infection and mortality patterns in strains of oysters Crassostrea
virginica selected for resistance to the parasite Haplosporidium nelsoni (MSX). J Parasitol
73:368–376
Franch R, Louro B, Tsalavouta M et al (2006) A genetic linkage map of the hermaphrodite teleost
fish Sparus aurata. Genetics 174:851–861
Frerichs GN, Rodger HD, Peric Z (1996) Cell culture isolation of piscine neuropathy nodavirus
from juvenile sea bass, Dicentrarchus labrax. J Gen Virol 77:2067–2071
Fryer JL, Sanders JE (1981) Bacterial kidney disease of salmonid fish. Annu Rev Microbiol
35:273–298
Gahr SA, Vallejo RL, Weber GM et al (2008) Effects of short-term growth hormone treatment on
liver and muscle transcriptomes in rainbow trout (Oncorhynchus mykiss). Physiol Genomics
32:380–392
Galindo HM, Olson DB, Palumbi SR (2006) Seascape genetics: A coupled oceanographic-genetic
model predicts population structure of Caribbean corals. Curr Biol 16:1622–1626
Gallardo JA, Garcia X, Lhorente JP et al (2004) Inbreeding and inbreeding depression of female
reproductive traits in two populations of Coho salmon selected using BLUP predictors of
breeding values. Aquaculture 234:111–122
269
Emmerich R, Weibel E (1894) Ueber eine durch bakterien erzengte seuche unter den forellen. Arch
Hyg Bakteriol 21:1–21
Endler JA (1986) Natural selection in the wild. Princeton University Press, Princeton
Escoubas J-M, Briant L, Montagnani C et al (1999) Oyster IKK-like protein shares structural and
functional properties with its mammalian homologues. FEBS Lett 453:293–298
Espe M, Ruohonen K, Bjørnevik M et al (2004) Interactions between ice storage time, collagen
composition, gaping and textural properties in farmed salmon muscle harvested at different
times of the year. Aquaculture 240:489–504
Ewart KV, Belanger JC, Williams J et al (2005) Identification of genes differentially expressed in
Atlantic salmon (Salmo salar) in response to infection by Aeromonas salmonicida using cDNA
microarray technology. Dev Comp Immunol 29:333–347
Faisal M, MacIntyre EA, Adham KG et al (1998) Evidence for the presence of protease inhibitors
in Eastern (Crassostrea virginica) and Pacific (Crassostrea gigas) oysters. Comp Biochem
Physiol B-Biochem Mol Biol 121:161–168
Faisal M, Schafhauser DY, Garreis KA et al (1999) Isolation and characterization of Perkinsus
marinus proteases using bacitracin-sepharose affinity chromatography. Comp Biochem Physiol
B-Biochem Mol Biol 123:417–426
Falch E, Rustad T, Jonsdottir R et al (2006) Geographical and seasonal differences in lipid composition and relative weight of by-products from gadiform species. J Food Compos Anal
19:727–736
Faliex E, Da Silva C, Simon G et al (2008) Dynamic expression of immune response genes in
the sea bass, Dicentrarchus labrax, experimentally infected with the monogenean Diplectanum
aequans. Fish Shellfish Immunol 24:759–767
Fawcett LB, Tripp MR (1994) Chemotaxis of Mercenaria mercenaria hemocytes to bacteria in
vitro. J Invertebr Pathol 63:275–284
Feder ME, Mitchell-Olds T (2003) Evolutionary and ecological functional genomics. Nat Rev
Genet 4:651–657
Fernandes JMO, Mackenzie MG, Elgar G et al (2005) A genomic approach to reveal novel genes
associated with myotube formation in the model teleost, Takifugu rubripes. Physiol Genomics
22:327–338
Ferraresso S, Vitulo N, Mininni AN et al (2008) Development and validation of a gene
expression oligo microarray for the gilthead sea bream (Sparus aurata). BMC Genomics 9:580
Fishback AG, Danzmann RG, Ferguson MM et al (2002) Estimates of genetic parameters and
genotype by environment interactions for growth traits of rainbow trout (Oncorhynchus mykiss)
as inferred using molecular pedigrees. Aquaculture 206:137–150
Ford SE, Haskin HH (1987) Infection and mortality patterns in strains of oysters Crassostrea
virginica selected for resistance to the parasite Haplosporidium nelsoni (MSX). J Parasitol
73:368–376
Franch R, Louro B, Tsalavouta M et al (2006) A genetic linkage map of the hermaphrodite teleost
fish Sparus aurata. Genetics 174:851–861
Frerichs GN, Rodger HD, Peric Z (1996) Cell culture isolation of piscine neuropathy nodavirus
from juvenile sea bass, Dicentrarchus labrax. J Gen Virol 77:2067–2071
Fryer JL, Sanders JE (1981) Bacterial kidney disease of salmonid fish. Annu Rev Microbiol
35:273–298
Gahr SA, Vallejo RL, Weber GM et al (2008) Effects of short-term growth hormone treatment on
liver and muscle transcriptomes in rainbow trout (Oncorhynchus mykiss). Physiol Genomics
32:380–392
Galindo HM, Olson DB, Palumbi SR (2006) Seascape genetics: A coupled oceanographic-genetic
model predicts population structure of Caribbean corals. Curr Biol 16:1622–1626
Gallardo JA, Garcia X, Lhorente JP et al (2004) Inbreeding and inbreeding depression of female
reproductive traits in two populations of Coho salmon selected using BLUP predictors of
breeding values. Aquaculture 234:111–122