6 Genomics of Marine Algae
207
Goddard H, Manison NF, Tomos D, Brownlee C (2000) Elemental propagation of calcium signals
in response-specific patterns determined by environmental stimulus strength. Proc Natl Acad
Sci USA 97:1932–1937
Guillou L, Eikrem W, Chrétiennot-Dinet MJ, Le Gall F, Massana R, Romari K, Pedrós-Alió C,
Vaulot D (2004) Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU
rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and
coastal marine ecosystems. Protist 155:193–214
Guillou L, Moon-Van Der Staay SY, Claustre H, Partensky F, Vaulot D (1999) Diversity and
abundance of Bolidophyceae (Heterokonta) in two oceanic regions. Appl Environ Microbiol
65:4528–4536
Guiry MD, Guiry GM (2008) AlgaeBase. Worldwide electronic publication, National University
of Ireland, Galway. http://www.algaebase.org.
Hackett JD, Scheetz TE, Yoon HS, Soares MB, Bonaldo MF, Casavant TL, Bhattacharya D (2005)
Insights into a dinoflagellate genome through expressed sequence tag analysis. BMC Genomics
6:80
Hackett JD, Yoon HS, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Nosenko T,
Bhattacharya D (2004) Migration of the plastid genome to the nucleus in a peridinin
dinoflagellate. Curr Biol 14:213–218
He P, Yao Q, Chen Q, Guo M, Xiong A, Wu W, Ma J (2001) Transferring and expression of glucose
oxidase gene – gluc in Porphyra yezoensis. J Phycol 37(suppl):22
Hutchinson GE (1961) The paradox of the plankton. Amer Nat 95:137–145
Ianora A, Miralto A, Poulet SA, Carotenuto Y, Buttino I, Romano G, Casotti R, Pohnert G, Wichard
T, Colucci-D’Amato L, Terrazzano G, Smetacek V (2004) Aldehyde suppression of copepod
recruitment in blooms of a ubiquitous planktonic diatom. Nature 429:403–407
Inagaki Y, Dacks JB, Doolittle WF, Watanabe KI, Ohama T (2000) Evolutionary relationship between dinoflagellates bearing obligate diatom endosymbionts: insight into tertiary
endosymbiosis. Int J Syst Evol Microbiol 50:2075–2081
Kapraun DF (2005) Nuclear DNA content estimates in multicellular green, red and brown algae:
phylogenetic considerations. Ann Bot 95:7–44
Keeling PJ (2004) Diversity and evolutionary history of plastids and their hosts. Amer J Bot
91:1481–1493
Keeling PJ (2007) Ostreococcus tauri: seeing through the genes to the genome. Trends Genet
23:151–154
Keeling PJ, Palmer JD (2008) Horizontal gene transfer in eukaryotic evolution. Nat Rev Genet
9:605–628
Kilian O, Kroth PG (2005) Identification and characterization of a new conserved motif within the
presequence of proteins targeted into complex diatom plastids. Plant J 41:175–183
Kitade Y, Asamizu E, Fukuda S, Nakajima M, Ootsuka S, Endo H, Tabata S, Saga N (2008)
Identification of genes preferentially expressed during asexual sporulation in Porphyra yezoensis gametophytes (bangiales, rhodophyta). J Phycol 44:113–123
Kitade Y, Iitsuka O, Fukuda S, Saga N (2004) Porphyra yezoensis as a model plant for genome
sciences. Jpn J Phycol 52:129–131
Klarzynski O, Plesse B, Joubert J-M, Yvin J-C, Kopp M, Kloareg B, Fritig B (2000) Linear b-1,3
glucans are elicitors of defense responses in tobacco. Plant Physiol 124:1027–1037
Kroth PG, Chiovitti A, Gruber A, Martin-Jezequel V, Mock T, Parker MS, Stanley MS, Kaplan
A, Caron L, Weber T, Maheswari U, Armbrust EV, Bowler C (2008) A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole
genome analysis. PLoS ONE 3:e1426
La Claire JW 2nd. (2006) Analysis of expressed sequence tags from the harmful alga, Prymnesium
parvum (Prymnesiophyceae, Haptophyta). Mar Biotechnol 8:534–546
LaJeunesse TC, Lambert G, Andersen RA, Coffroth MA, Galbraith DW (2005) Symbiodinium
(Pyrrhophyta) genome sizes (DNA content) are smallest among dinoflagellates. J Phycol
41:880–886
207
Goddard H, Manison NF, Tomos D, Brownlee C (2000) Elemental propagation of calcium signals
in response-specific patterns determined by environmental stimulus strength. Proc Natl Acad
Sci USA 97:1932–1937
Guillou L, Eikrem W, Chrétiennot-Dinet MJ, Le Gall F, Massana R, Romari K, Pedrós-Alió C,
Vaulot D (2004) Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU
rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and
coastal marine ecosystems. Protist 155:193–214
Guillou L, Moon-Van Der Staay SY, Claustre H, Partensky F, Vaulot D (1999) Diversity and
abundance of Bolidophyceae (Heterokonta) in two oceanic regions. Appl Environ Microbiol
65:4528–4536
Guiry MD, Guiry GM (2008) AlgaeBase. Worldwide electronic publication, National University
of Ireland, Galway. http://www.algaebase.org.
Hackett JD, Scheetz TE, Yoon HS, Soares MB, Bonaldo MF, Casavant TL, Bhattacharya D (2005)
Insights into a dinoflagellate genome through expressed sequence tag analysis. BMC Genomics
6:80
Hackett JD, Yoon HS, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Nosenko T,
Bhattacharya D (2004) Migration of the plastid genome to the nucleus in a peridinin
dinoflagellate. Curr Biol 14:213–218
He P, Yao Q, Chen Q, Guo M, Xiong A, Wu W, Ma J (2001) Transferring and expression of glucose
oxidase gene – gluc in Porphyra yezoensis. J Phycol 37(suppl):22
Hutchinson GE (1961) The paradox of the plankton. Amer Nat 95:137–145
Ianora A, Miralto A, Poulet SA, Carotenuto Y, Buttino I, Romano G, Casotti R, Pohnert G, Wichard
T, Colucci-D’Amato L, Terrazzano G, Smetacek V (2004) Aldehyde suppression of copepod
recruitment in blooms of a ubiquitous planktonic diatom. Nature 429:403–407
Inagaki Y, Dacks JB, Doolittle WF, Watanabe KI, Ohama T (2000) Evolutionary relationship between dinoflagellates bearing obligate diatom endosymbionts: insight into tertiary
endosymbiosis. Int J Syst Evol Microbiol 50:2075–2081
Kapraun DF (2005) Nuclear DNA content estimates in multicellular green, red and brown algae:
phylogenetic considerations. Ann Bot 95:7–44
Keeling PJ (2004) Diversity and evolutionary history of plastids and their hosts. Amer J Bot
91:1481–1493
Keeling PJ (2007) Ostreococcus tauri: seeing through the genes to the genome. Trends Genet
23:151–154
Keeling PJ, Palmer JD (2008) Horizontal gene transfer in eukaryotic evolution. Nat Rev Genet
9:605–628
Kilian O, Kroth PG (2005) Identification and characterization of a new conserved motif within the
presequence of proteins targeted into complex diatom plastids. Plant J 41:175–183
Kitade Y, Asamizu E, Fukuda S, Nakajima M, Ootsuka S, Endo H, Tabata S, Saga N (2008)
Identification of genes preferentially expressed during asexual sporulation in Porphyra yezoensis gametophytes (bangiales, rhodophyta). J Phycol 44:113–123
Kitade Y, Iitsuka O, Fukuda S, Saga N (2004) Porphyra yezoensis as a model plant for genome
sciences. Jpn J Phycol 52:129–131
Klarzynski O, Plesse B, Joubert J-M, Yvin J-C, Kopp M, Kloareg B, Fritig B (2000) Linear b-1,3
glucans are elicitors of defense responses in tobacco. Plant Physiol 124:1027–1037
Kroth PG, Chiovitti A, Gruber A, Martin-Jezequel V, Mock T, Parker MS, Stanley MS, Kaplan
A, Caron L, Weber T, Maheswari U, Armbrust EV, Bowler C (2008) A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole
genome analysis. PLoS ONE 3:e1426
La Claire JW 2nd. (2006) Analysis of expressed sequence tags from the harmful alga, Prymnesium
parvum (Prymnesiophyceae, Haptophyta). Mar Biotechnol 8:534–546
LaJeunesse TC, Lambert G, Andersen RA, Coffroth MA, Galbraith DW (2005) Symbiodinium
(Pyrrhophyta) genome sizes (DNA content) are smallest among dinoflagellates. J Phycol
41:880–886