3 Populations and Pathways
107
Boutet I, Ky CL, Bonhomme F (2006) A transcriptomic approach of salinity response in the
euryhaline teleost, Dicentrarchus labrax. Gene 379:40–50
Boutet I, Nebel C, De Lorgeril J, Guinand B (2007) Molecular characterisation and extrapituitary
prolactin expression in the European sea bass Dicentrarchus labrax under salinity stress. Comp
Biochem Physiol D 2:74–83
Boutet I, Tanguy A, Le Guen D, Piccino P, Hourdez S, Ravaux J, Shillito B, Legendre P, Jollivet D
(2008) Global depression in gene expression as a response to rapid changes of temperature in
the hydrothermal vent mussel Bathymodiolus azoricus. PLOS Biol 276:3071–3079
Bradley B, Theodorakis C (2002) The post-genomic era and ecotoxicology. Ecotoxicology 11:7–9
Brenner S, Johnson M, Bridgham J, Golda G, Lloyd DH, Johnson D, Luo S, McCurdy S, Foy M,
Ewan M et al. (2000a) Gene expression analysis by massively parallel signature sequencing
(MPSS) on microbead arrays. Nat Biotech 18:630–634
Britten RJ, Rowen L, Williams J, Cameron RA (2003) Majority of divergence between closely
related DNA samples is due to indels. Proc Natl Acad Sci USA 100:4661–4665
Buckley BA (2007) Comparative environmental genomics in non-model species: using heterologous hybridisation to DNA-based arrays. J Exp Biol 210:1602–1606
Buckley BA, Owen M-E, Hofmann GE (2001) Adjusting the thermostat: the threshold induction
temperature for the heat-shock response in intertidal mussels (genus Mytilus) changes as a
function of thermal history. J Exp Biol 204:3571–3579
Buckley BA, Somero GN (2009) cDNA analysis reveals the capacity of the cold adapted Antarctic
fish Trematomus bernacchii to alter gene expression in response to heat stress. Polar Biol
32:403–415
Caldeira K, Wicket ME (2003) Oceanography: anthropogenic carbon and ocean pH. Nature
425:365
Caldeira K, Wicket ME (2005) Ocean model prediction of chemistry changes from carbon dioxide emission to the atmosphere and ocean. Geophy Res Lett 110:C09S04.
doi:10.1029/2004JC002671
Company R, Serafim A, Cosson RP, Fiala-Medioni A, Camus L, Colaco A, Serrao-Santos
R, Bebianno MJ (2008) Antioxidant biochemical responses to long-term copper exposure
in Bathymodiolus azoricus from Menez-Gwen hydrothermal vent. Sci Total Environ 389:
407–417
Campbell D, Bernatchez L (2004) Generic scan using AFLP markers genes as a means to assess
the role of directional selection in the divergence of sympatric whitefish ecotypes. Mol Biol
Evol 21:945–956
Campbell D, Duchesne P, Bernatchez L (2003) AFLP utility for population assignment studies:
analytical investigation and empirical comparison with microsatellites. Mol Ecol 12:1979–1991
Campbell NR, Narum SR (2008) Identification of novel SNPs in Chinook salmon and variation
among life history types. Trans Am Fish Soc 137:96–106
Canadell JG, Le Quere C, Raupach MR, Field CB, Buitenhuis ET, Ciais P, Conway TJ, Gillett NP,
Houghton RA, Marland G (2007) Contributions to accelerating atmospheric CO 2 growth from
economic activity, carbon intensity, and efficiency of natural sinks. Proc Natl Acad Sci USA
doi:10.1073/pnas.0702737104
Cao L, Caldeira K, Jain AK (2007) Effects of carbon dioxide and climate change on
ocean acidification and carbonate mineral saturation. Geophys Res Lett 34:L05607.
doi:10.1029/2006GL028605
Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu
M (2002) Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length
cDNA libraries for rapid discovery of new genes. Genome Res 10:1617–1630
Caroll SP (2008) Facing change: forms and foundations of contemporary adaptation to biotic
invasions. Mol Ecol 17:361–372
Chatziplis D, Batargias C, Tsigenopoulos CS, Magoulas A, Kollias S, Kotoulas G, Volckaert FAM,
Haley CS (2007) Mapping quantitative trait loci in European sea bass (Dicentrarchus labrax):
The BASSMAP pilot study. Aquaculture 272:S172–S182
107
Boutet I, Ky CL, Bonhomme F (2006) A transcriptomic approach of salinity response in the
euryhaline teleost, Dicentrarchus labrax. Gene 379:40–50
Boutet I, Nebel C, De Lorgeril J, Guinand B (2007) Molecular characterisation and extrapituitary
prolactin expression in the European sea bass Dicentrarchus labrax under salinity stress. Comp
Biochem Physiol D 2:74–83
Boutet I, Tanguy A, Le Guen D, Piccino P, Hourdez S, Ravaux J, Shillito B, Legendre P, Jollivet D
(2008) Global depression in gene expression as a response to rapid changes of temperature in
the hydrothermal vent mussel Bathymodiolus azoricus. PLOS Biol 276:3071–3079
Bradley B, Theodorakis C (2002) The post-genomic era and ecotoxicology. Ecotoxicology 11:7–9
Brenner S, Johnson M, Bridgham J, Golda G, Lloyd DH, Johnson D, Luo S, McCurdy S, Foy M,
Ewan M et al. (2000a) Gene expression analysis by massively parallel signature sequencing
(MPSS) on microbead arrays. Nat Biotech 18:630–634
Britten RJ, Rowen L, Williams J, Cameron RA (2003) Majority of divergence between closely
related DNA samples is due to indels. Proc Natl Acad Sci USA 100:4661–4665
Buckley BA (2007) Comparative environmental genomics in non-model species: using heterologous hybridisation to DNA-based arrays. J Exp Biol 210:1602–1606
Buckley BA, Owen M-E, Hofmann GE (2001) Adjusting the thermostat: the threshold induction
temperature for the heat-shock response in intertidal mussels (genus Mytilus) changes as a
function of thermal history. J Exp Biol 204:3571–3579
Buckley BA, Somero GN (2009) cDNA analysis reveals the capacity of the cold adapted Antarctic
fish Trematomus bernacchii to alter gene expression in response to heat stress. Polar Biol
32:403–415
Caldeira K, Wicket ME (2003) Oceanography: anthropogenic carbon and ocean pH. Nature
425:365
Caldeira K, Wicket ME (2005) Ocean model prediction of chemistry changes from carbon dioxide emission to the atmosphere and ocean. Geophy Res Lett 110:C09S04.
doi:10.1029/2004JC002671
Company R, Serafim A, Cosson RP, Fiala-Medioni A, Camus L, Colaco A, Serrao-Santos
R, Bebianno MJ (2008) Antioxidant biochemical responses to long-term copper exposure
in Bathymodiolus azoricus from Menez-Gwen hydrothermal vent. Sci Total Environ 389:
407–417
Campbell D, Bernatchez L (2004) Generic scan using AFLP markers genes as a means to assess
the role of directional selection in the divergence of sympatric whitefish ecotypes. Mol Biol
Evol 21:945–956
Campbell D, Duchesne P, Bernatchez L (2003) AFLP utility for population assignment studies:
analytical investigation and empirical comparison with microsatellites. Mol Ecol 12:1979–1991
Campbell NR, Narum SR (2008) Identification of novel SNPs in Chinook salmon and variation
among life history types. Trans Am Fish Soc 137:96–106
Canadell JG, Le Quere C, Raupach MR, Field CB, Buitenhuis ET, Ciais P, Conway TJ, Gillett NP,
Houghton RA, Marland G (2007) Contributions to accelerating atmospheric CO 2 growth from
economic activity, carbon intensity, and efficiency of natural sinks. Proc Natl Acad Sci USA
doi:10.1073/pnas.0702737104
Cao L, Caldeira K, Jain AK (2007) Effects of carbon dioxide and climate change on
ocean acidification and carbonate mineral saturation. Geophys Res Lett 34:L05607.
doi:10.1029/2006GL028605
Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu
M (2002) Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length
cDNA libraries for rapid discovery of new genes. Genome Res 10:1617–1630
Caroll SP (2008) Facing change: forms and foundations of contemporary adaptation to biotic
invasions. Mol Ecol 17:361–372
Chatziplis D, Batargias C, Tsigenopoulos CS, Magoulas A, Kollias S, Kotoulas G, Volckaert FAM,
Haley CS (2007) Mapping quantitative trait loci in European sea bass (Dicentrarchus labrax):
The BASSMAP pilot study. Aquaculture 272:S172–S182