Contents
1 Genomics in the Discovery and Monitoring
of Marine Biodiversity . . . . . . . . . . . . . . . . . . . . . . . . .
1
G.R. Carvalho, S. Creer, Michael J. Allen, F.O. Costa,
C.S. Tsigenopoulos, M. Le Goff-Vitry, A. Magoulas,
L. Medlin, and K. Metfies
2 Metagenome Analysis . . . . . . . . . . . . . . . . . . . . . . . . .
33
Anke Meyerdierks and Frank Oliver Glöckner
3 Populations and Pathways: Genomic Approaches
to Understanding Population Structure and Environmental
Adaptation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
73
Melody S. Clark, Arnaud Tanguy, Didier Jollivet,
François Bonhomme, Bruno Guinand, and Frédérique Viard
4 Phylogeny of Animals: Genomes Have a Lot to Say . . . . . . . . . 119
Ferdinand Marlétaz and Yannick Le Parco
5 Metazoan Complexity . . . . . . . . . . . . . . . . . . . . . . . . . 143
Florian Raible and Patrick R.H. Steinmetz
6 Genomics of Marine Algae . . . . . . . . . . . . . . . . . . . . . . . 179
Susana M. Coelho, Svenja Heesch, Nigel Grimsley,
Hervé Moreau and J. Mark Cock
7 Genomic Approaches in Aquaculture and Fisheries . . . . . . . . . 213
M. Leonor Cancela, Luca Bargelloni, Pierre Boudry,
Viviane Boulo, Jorge Dias, Arnaud Huvet, Vincent Laizé,
Sylvie Lapègue, Ricardo Leite, Sara Mira, Einar E. Nielsen,
Josep V. Planas, Nerea Roher, Elena Sarropoulou,
and Filip A.M. Volckaert
8 Marine Biotechnology . . . . . . . . . . . . . . . . . . . . . . . . . 287
Joel Querellou, Jean-Paul Cadoret, Michael J. Allen, and
Jonas Collén
ix