Part A | 8
254 Part A Marine Flora and Fauna
bacteria, Mar. Biotechnol. (NY) 12(4), 395–402
(2010)
8.252 T. Abe, F.P. Sahin, K. Akiyama, T. Naito,
M. Kishigami, K. Miyamoto, Y. Sakakibera, D. Uemura: Construction of a metagenomic library for
the marine sponge Halichondria okadai, Biosci.
Biotechnol. Biochem. 76(4), 1–7 (2012)
8.253 S.M. Pimentel-Elardo, S. Kozytska, T.S. Bugni,
C.M. Ireland, H. Moll, U. Hentschel: Anti-parasitic
compounds from Streptomyces sp. strains isolated
from Mediterranean sponges, Mar. Drugs 8(2), 373–
380 (2010)
8.254 J. Selvin, J. Kennedy, D.P. Lejon, S. Kiran, A.D. Dobson: Isolation identification and biochemical characterization of a novel halo-tolerant lipase from
the metagenome of the marine sponge Haliclona
simulans, Microb. Cell Fact. 11(1), 72 (2012)
8.255 D.P.H. Lejon, J. Kennedy, A.D.W. Dobson: Identification of novel bioactive compounds from the
metagenome of the marine sponge Haliclona simulans. In: Handbook of Molecular Microbial Ecology
II: Metagenomics in Different Habitats, ed. by J. de
Frans Bruijn (Wiley-Blackwell, Hoboken 2011) pp.
553–562
8.256 D.G. Lee, J.H. Jeon, M.K. Jang, N.Y. Kim, J.H. Lee,
J.H. Lee, S.J. Kim, G.D. Kim, S.H. Lee: Screening and
characterisation of a novel fibrinolytic metalloprotease from a metagenomic library, Biotechnol. Lett.
29(3), 465–472 (2007)
8.257 Y. Zhang, J. Zhao, R. Zeng: Expression and characterization of a novel mesophilic protease from
metagenomic library derived from Antarctic coastal
sediment, Extremophiles 15(1), 23–29 (2011)
8.258 D.J. Rooks, J.E. McDonald, A.J. McCarthy: Metagenomic approaches to the discovery of cellulases,
Methods Enzymol. 510, 375–394 (2012)
8.259 D. Kim, S.N. Kim, K.S. Baik, S.C. Park, C.H. Lim,
J.O. Kim, T.S. Shin, M.J. Oh, C.N. Seong: Screening
and characterisation of a cellulase gene from the
gut microflora of abalone using metagenomic library, Microbiology 49(1), 141–145 (2011)
8.260 Z. Fang, T. Li, Q. Wang, X. Zhang, H. Peng, W. Fang,
Y. Hong, H. Ge, Y. Xiao: A ˜
bacterial laccase from
marine microbial metagenome exhibiting chloride
tolerance and dye decolourisation ability, Appl. Microbiol. Biotechnol. 89, 1103–1110 (2011)
8.261 A. Beloqui, M. Pita, J. Polaina, A. MartínezArias, O.V. Golyshina, M. Zumárraga, M.M. Yakimov,
H. García-Arellano, M. Alcalde, V.M. Fernández,
K. Elborough, J.M. Andreu, A. Ballesteros, F.J. Plou,
K.N. Timmis, M. Ferrer, P.N. Golyshin: Novel
polyphenol oxidase mined from a metagenome
expression library of bovine rumen: biochemical properties, structural analysis and phylogenetic relationships, J. Biol. Chem. 282, 22933–22942
(2006)
8.262 M. Ye, G. Li, W.Q. Liang, Y.H. Liu: Molecular cloning
and characterization of a novel metagenomederived multicopper oxidase with alkaline laccase
activity and highly soluble expression, Appl. Microbiol. Biotechnol. 87, 1023–1031 (2010)
8.263 M. Ferrer, A. Beloqui, P.N. Golyshin: Screening
metagenomic libraries for laccase activities, Methods Mol. Biol. 668, 189–202 (2010)
8.264 H.A. Iqbal, Z. Feng, S.F. Brady: Biocatalysts and
small molecule products from metagenomic studies, Curr. Opin. Chem. Biol. 16, 109–116 (2012)
8.265 D.M. Ekkers, M.S. Cretoiu, A.M. Kielak, J.D. Elsas: The great screen anomaly—a new frontier
in product discovery through functional metagenomics, Appl. Microbiol. Biotechnol. 93(3), 1005–
1020 (2012)
8.266 T. Uchiyama, K. Miyazaki: Functional metagenomics for enzyme discovery: challenges to efficient screening, Curr. Opin. Biotechnol. 20(6), 616–
622 (2009)
8.267 J. Kennedy, N.D. O’Leary, G.S. Kiran, J.P. Morrissey, F. O’Gara, J. Selvin, A.D. Dobson: Functional
metagenomic strategies for the discovery of novel
enzymes and biosurfactants with biotechnological
applications from marine ecosystems, J. Appl. Microbiol. 111(4), 787–799 (2011)
8.268 C. Simon, R. Daniel: Metagenomic analyses: past
and future trends, Appl. Environ. Microbiol. 77(4),
1153–1161 (2011)
8.269 J. Wild, Z. Hradecna, W. Szybalski: Conditionally
amplifiable BACs: switching from single-copy to
high-copy vectors and genomic clones, Genome
Res. 12(9), 1434–1444 (2002)
8.270 M. Xu, X. Xiao, F. Wang: Isolation and characterisation of alkane hydroxylases from a metagenomic library of Pacific deep-sea sediment, Extremophiles
12(2), 255–262 (2008)
8.271 K. Bayer, M. Scheuermayer, L. Fiesler, U. Hentschel:
Genomic mining for novel FADH 2 -dependent
halogenases in marine sponge-associated microbial consortia, Mar. Biotechnol. 15(1), 63–72
(2013)
8.272 M.T. Cottrell, L. Yu, D.L. Kirchman: Sequence and
expression analyses of Cytophaga-like hydrolases
in a Western arctic metagenomic library and
the Sargasso Sea, Appl. Environ. Microbiol. 71(12),
8506–8513 (2005)
8.273 J.M. Wojnar, P.T. Northcote: The agminosides: naturally acetylated glycolipids from the New Zealand
marine sponge Raspailia agminata, J. Nat. Prod.
74(1), 69–73 (2011)
8.274 B.A. Neilan, E. Dittmann, L. Rouhiainen, R.A. Bass,
V. Schaub, K. Sivonen, T. Börner: Nonribosomal
peptide synthesis and toxigenicity of cyanobacteria, J. Bacteriol. 181, 4089–4097 (1999)
8.275 M.F. Freeman, C. Gurgui, M.J. Helf, B.I. Morinaka,
A.R. Uria, N.J. Oldham, H.-G. Sahl, S. Matsunga,
J. Piel: Metagenome mining reveals polytheonamides as postranslationally modified peptides,
Science 338, 387–390 (2012)
254 Part A Marine Flora and Fauna
bacteria, Mar. Biotechnol. (NY) 12(4), 395–402
(2010)
8.252 T. Abe, F.P. Sahin, K. Akiyama, T. Naito,
M. Kishigami, K. Miyamoto, Y. Sakakibera, D. Uemura: Construction of a metagenomic library for
the marine sponge Halichondria okadai, Biosci.
Biotechnol. Biochem. 76(4), 1–7 (2012)
8.253 S.M. Pimentel-Elardo, S. Kozytska, T.S. Bugni,
C.M. Ireland, H. Moll, U. Hentschel: Anti-parasitic
compounds from Streptomyces sp. strains isolated
from Mediterranean sponges, Mar. Drugs 8(2), 373–
380 (2010)
8.254 J. Selvin, J. Kennedy, D.P. Lejon, S. Kiran, A.D. Dobson: Isolation identification and biochemical characterization of a novel halo-tolerant lipase from
the metagenome of the marine sponge Haliclona
simulans, Microb. Cell Fact. 11(1), 72 (2012)
8.255 D.P.H. Lejon, J. Kennedy, A.D.W. Dobson: Identification of novel bioactive compounds from the
metagenome of the marine sponge Haliclona simulans. In: Handbook of Molecular Microbial Ecology
II: Metagenomics in Different Habitats, ed. by J. de
Frans Bruijn (Wiley-Blackwell, Hoboken 2011) pp.
553–562
8.256 D.G. Lee, J.H. Jeon, M.K. Jang, N.Y. Kim, J.H. Lee,
J.H. Lee, S.J. Kim, G.D. Kim, S.H. Lee: Screening and
characterisation of a novel fibrinolytic metalloprotease from a metagenomic library, Biotechnol. Lett.
29(3), 465–472 (2007)
8.257 Y. Zhang, J. Zhao, R. Zeng: Expression and characterization of a novel mesophilic protease from
metagenomic library derived from Antarctic coastal
sediment, Extremophiles 15(1), 23–29 (2011)
8.258 D.J. Rooks, J.E. McDonald, A.J. McCarthy: Metagenomic approaches to the discovery of cellulases,
Methods Enzymol. 510, 375–394 (2012)
8.259 D. Kim, S.N. Kim, K.S. Baik, S.C. Park, C.H. Lim,
J.O. Kim, T.S. Shin, M.J. Oh, C.N. Seong: Screening
and characterisation of a cellulase gene from the
gut microflora of abalone using metagenomic library, Microbiology 49(1), 141–145 (2011)
8.260 Z. Fang, T. Li, Q. Wang, X. Zhang, H. Peng, W. Fang,
Y. Hong, H. Ge, Y. Xiao: A ˜
bacterial laccase from
marine microbial metagenome exhibiting chloride
tolerance and dye decolourisation ability, Appl. Microbiol. Biotechnol. 89, 1103–1110 (2011)
8.261 A. Beloqui, M. Pita, J. Polaina, A. MartínezArias, O.V. Golyshina, M. Zumárraga, M.M. Yakimov,
H. García-Arellano, M. Alcalde, V.M. Fernández,
K. Elborough, J.M. Andreu, A. Ballesteros, F.J. Plou,
K.N. Timmis, M. Ferrer, P.N. Golyshin: Novel
polyphenol oxidase mined from a metagenome
expression library of bovine rumen: biochemical properties, structural analysis and phylogenetic relationships, J. Biol. Chem. 282, 22933–22942
(2006)
8.262 M. Ye, G. Li, W.Q. Liang, Y.H. Liu: Molecular cloning
and characterization of a novel metagenomederived multicopper oxidase with alkaline laccase
activity and highly soluble expression, Appl. Microbiol. Biotechnol. 87, 1023–1031 (2010)
8.263 M. Ferrer, A. Beloqui, P.N. Golyshin: Screening
metagenomic libraries for laccase activities, Methods Mol. Biol. 668, 189–202 (2010)
8.264 H.A. Iqbal, Z. Feng, S.F. Brady: Biocatalysts and
small molecule products from metagenomic studies, Curr. Opin. Chem. Biol. 16, 109–116 (2012)
8.265 D.M. Ekkers, M.S. Cretoiu, A.M. Kielak, J.D. Elsas: The great screen anomaly—a new frontier
in product discovery through functional metagenomics, Appl. Microbiol. Biotechnol. 93(3), 1005–
1020 (2012)
8.266 T. Uchiyama, K. Miyazaki: Functional metagenomics for enzyme discovery: challenges to efficient screening, Curr. Opin. Biotechnol. 20(6), 616–
622 (2009)
8.267 J. Kennedy, N.D. O’Leary, G.S. Kiran, J.P. Morrissey, F. O’Gara, J. Selvin, A.D. Dobson: Functional
metagenomic strategies for the discovery of novel
enzymes and biosurfactants with biotechnological
applications from marine ecosystems, J. Appl. Microbiol. 111(4), 787–799 (2011)
8.268 C. Simon, R. Daniel: Metagenomic analyses: past
and future trends, Appl. Environ. Microbiol. 77(4),
1153–1161 (2011)
8.269 J. Wild, Z. Hradecna, W. Szybalski: Conditionally
amplifiable BACs: switching from single-copy to
high-copy vectors and genomic clones, Genome
Res. 12(9), 1434–1444 (2002)
8.270 M. Xu, X. Xiao, F. Wang: Isolation and characterisation of alkane hydroxylases from a metagenomic library of Pacific deep-sea sediment, Extremophiles
12(2), 255–262 (2008)
8.271 K. Bayer, M. Scheuermayer, L. Fiesler, U. Hentschel:
Genomic mining for novel FADH 2 -dependent
halogenases in marine sponge-associated microbial consortia, Mar. Biotechnol. 15(1), 63–72
(2013)
8.272 M.T. Cottrell, L. Yu, D.L. Kirchman: Sequence and
expression analyses of Cytophaga-like hydrolases
in a Western arctic metagenomic library and
the Sargasso Sea, Appl. Environ. Microbiol. 71(12),
8506–8513 (2005)
8.273 J.M. Wojnar, P.T. Northcote: The agminosides: naturally acetylated glycolipids from the New Zealand
marine sponge Raspailia agminata, J. Nat. Prod.
74(1), 69–73 (2011)
8.274 B.A. Neilan, E. Dittmann, L. Rouhiainen, R.A. Bass,
V. Schaub, K. Sivonen, T. Börner: Nonribosomal
peptide synthesis and toxigenicity of cyanobacteria, J. Bacteriol. 181, 4089–4097 (1999)
8.275 M.F. Freeman, C. Gurgui, M.J. Helf, B.I. Morinaka,
A.R. Uria, N.J. Oldham, H.-G. Sahl, S. Matsunga,
J. Piel: Metagenome mining reveals polytheonamides as postranslationally modified peptides,
Science 338, 387–390 (2012)