14
D. R. GOODLETT et al.: Strategies and Methods for Proteome Analysis
Fraser C M, Casjens S, Huang W M, Sutton G G, Clayton R, Lathigra R, White 0, Ketchum K A, Dodson R, Hickey E K, Gwinn M, Dougherty B, Tomb J F, Fleischmann R D, Richardson D, Peterson J,
Kerlavage A R, Quackenbush J, Salzberg S, Hanson M, van Vugt R, Palmer N, Adams M D, Gocayne
J, Weidman J, Utterback T, Watthey T, McDonald L, Artiach P, Bowman C, Garland S, Fujii C, Cotton M D, Horst K, Roberts K, Hatch B, Smith H 0 and Venter J C (1997) Nature 390:580-586
Fu X Y, Schindler C, Importa T, Aebersold R and Darnell Jr J E (1992) Proc Nat! Acad Sci USA
89:7840-7843
Garrels J L, McLaughlin C S, Warner J R, Futcher B, Latter G I, Kobayashi R, Schwender B, Volpe T,
Anderson D S, Mesquita-Fuentes R and Payne W E (1997) Electrohporesis 18:1347-1360
Goffeau A, Barrell B G, Bussey H, Davis R W, Dujon B, Feldmann H, Gailbert F, Hoheisel J D, Jacq C,
Johnston M, Louis E J, Mewes H W, Murakami Y, Philippsin P, Tettelin H and Oliver S G (1996) Science 274:546-549
Goodlett D R, Wahl J H, Udseth H R and Smith R D (1993) J of Microcolumn Separations 5:57-62
Gorg A, Postel Wand Gunther S (1988) Electrophoresis 9:531- 546
Gygi S P, Rochon Y, Franza BRand Aebersold R (1999) Mol Cell Bioi accepted
Hieter B, Vogelstein B and Kinzler K W (1997) Cell 88:243-251
Honore B, Leffers H, Madsen P and Celis J E (1993) Eur J Biochem 218:421-430
Huddleston M J, Annan R S, Bean M F and Carr S A (1993) J Am Soc Mass Spectrom 4:710-717
Hunt D F, Yates III J R, Shabanowitz J, Winston S and Hauer C R (1986) Proc Nat! Acad Sci USA
83:6233-6236
Hunter A P and Games D E (1994) Rapid Commun Mass Spectrom 8:559-570
Klose J and Kobalz U (1995) Electrophoresis 16:1034-1059
Lee N, Goodlett DR, Ishitani A, Marquardt H and Geraghty D (1998) J of Immunology 160:4951-4960
Mann M and Wilm M (1994) Anal Chern 66:4390-4399
Matsudaria P (1987) J Bioi Chern 262:10035-10038
Patterson S D and Aebersold R H (1995) Electrohporesis 16:1791-1814
Roepstorff P and Fohlman J (1984) Biomed Mass Spectromll:601
Rosenfeld J, Capdevielle J, Guillemot J C and Ferrara P (1992) Anal Biochem 203:173-179
Shevchenko A, Wilm M, Vorm 0 and Mann M (1996) Anal Chern 68:850-858
Susin S A, Lorenzo H K, Zamzami N, Marzo I, Brothers G, Snow B, Jacotot E, Costantini P, Larochette
N, Goodlett D R, Aebersold R, Pietu G, Prevost M-C, Siderovski D, Penninger J and Kroemer G
(1999) Nature 397:441
Veals S A, Schindler C, Leonard D, Fu X Y, Aebersold R, Darnell Jr J E and Levy D E (1992) Mol Cell
Bioi 12:3315-3324
Watts J D, Affolter M, Krebs D L, Wange R L, Samelson L E and Aebersold R (1994) J Bioi Chern
269:29520-29529
Wilkins M R, Pasquali C, Appel R D, Ou K, Golaz 0, Sanchez J-C, Yan J X, Gooley A A, Hughes G,
Humphrey-Smith I, Williams K Land Hochstrasser D (1996) Biotechnology 14:61-65
Wilm M, Shevchenko A, Houthaeve T, Breit S, Schweigerer L, Fotsis T and Mann M (1996) Nature
379:466-469
Yates III J R, Eng J K, McCormack A Land Schieltz D (1995) Anal Chern 67:1426-1436
Zhang Y, Figeys D and Aebersold R (1998) Anal Biochem 261:124-127
D. R. GOODLETT et al.: Strategies and Methods for Proteome Analysis
Fraser C M, Casjens S, Huang W M, Sutton G G, Clayton R, Lathigra R, White 0, Ketchum K A, Dodson R, Hickey E K, Gwinn M, Dougherty B, Tomb J F, Fleischmann R D, Richardson D, Peterson J,
Kerlavage A R, Quackenbush J, Salzberg S, Hanson M, van Vugt R, Palmer N, Adams M D, Gocayne
J, Weidman J, Utterback T, Watthey T, McDonald L, Artiach P, Bowman C, Garland S, Fujii C, Cotton M D, Horst K, Roberts K, Hatch B, Smith H 0 and Venter J C (1997) Nature 390:580-586
Fu X Y, Schindler C, Importa T, Aebersold R and Darnell Jr J E (1992) Proc Nat! Acad Sci USA
89:7840-7843
Garrels J L, McLaughlin C S, Warner J R, Futcher B, Latter G I, Kobayashi R, Schwender B, Volpe T,
Anderson D S, Mesquita-Fuentes R and Payne W E (1997) Electrohporesis 18:1347-1360
Goffeau A, Barrell B G, Bussey H, Davis R W, Dujon B, Feldmann H, Gailbert F, Hoheisel J D, Jacq C,
Johnston M, Louis E J, Mewes H W, Murakami Y, Philippsin P, Tettelin H and Oliver S G (1996) Science 274:546-549
Goodlett D R, Wahl J H, Udseth H R and Smith R D (1993) J of Microcolumn Separations 5:57-62
Gorg A, Postel Wand Gunther S (1988) Electrophoresis 9:531- 546
Gygi S P, Rochon Y, Franza BRand Aebersold R (1999) Mol Cell Bioi accepted
Hieter B, Vogelstein B and Kinzler K W (1997) Cell 88:243-251
Honore B, Leffers H, Madsen P and Celis J E (1993) Eur J Biochem 218:421-430
Huddleston M J, Annan R S, Bean M F and Carr S A (1993) J Am Soc Mass Spectrom 4:710-717
Hunt D F, Yates III J R, Shabanowitz J, Winston S and Hauer C R (1986) Proc Nat! Acad Sci USA
83:6233-6236
Hunter A P and Games D E (1994) Rapid Commun Mass Spectrom 8:559-570
Klose J and Kobalz U (1995) Electrophoresis 16:1034-1059
Lee N, Goodlett DR, Ishitani A, Marquardt H and Geraghty D (1998) J of Immunology 160:4951-4960
Mann M and Wilm M (1994) Anal Chern 66:4390-4399
Matsudaria P (1987) J Bioi Chern 262:10035-10038
Patterson S D and Aebersold R H (1995) Electrohporesis 16:1791-1814
Roepstorff P and Fohlman J (1984) Biomed Mass Spectromll:601
Rosenfeld J, Capdevielle J, Guillemot J C and Ferrara P (1992) Anal Biochem 203:173-179
Shevchenko A, Wilm M, Vorm 0 and Mann M (1996) Anal Chern 68:850-858
Susin S A, Lorenzo H K, Zamzami N, Marzo I, Brothers G, Snow B, Jacotot E, Costantini P, Larochette
N, Goodlett D R, Aebersold R, Pietu G, Prevost M-C, Siderovski D, Penninger J and Kroemer G
(1999) Nature 397:441
Veals S A, Schindler C, Leonard D, Fu X Y, Aebersold R, Darnell Jr J E and Levy D E (1992) Mol Cell
Bioi 12:3315-3324
Watts J D, Affolter M, Krebs D L, Wange R L, Samelson L E and Aebersold R (1994) J Bioi Chern
269:29520-29529
Wilkins M R, Pasquali C, Appel R D, Ou K, Golaz 0, Sanchez J-C, Yan J X, Gooley A A, Hughes G,
Humphrey-Smith I, Williams K Land Hochstrasser D (1996) Biotechnology 14:61-65
Wilm M, Shevchenko A, Houthaeve T, Breit S, Schweigerer L, Fotsis T and Mann M (1996) Nature
379:466-469
Yates III J R, Eng J K, McCormack A Land Schieltz D (1995) Anal Chern 67:1426-1436
Zhang Y, Figeys D and Aebersold R (1998) Anal Biochem 261:124-127