305
Hoehler, T.M., Alperin, M.J., Albert, D.B., and
Martens, C.S., 1994. Field and laboratory studies
of methane oxidation in an anoxic marine sediment: Evidence for a methanogen-sulfate reducer
consortium. Global Biogeochemical Cycles, 8:
4 5 1 - 4 6 3 .
Hoehler, T.M., Alperin, M.J., Albert, D.B., and Martens,
C.S., 1998. Thermodynamic control on hydrogen
concentration in anoxic sediments. Geochimica et
Cosmochimica Acta, 62: 1745-1756.
Hoehler, T.M., Alperin, M.J., Albert, D.B., and Martens,
C.S., 2001. Apparent minimum free energy
requirements for methanogenic Archaea and sulfatereducing bacteria in an anoxic marine sediment.
FEMS Microbiology Ecology, 38: 33-41.
Howarth, R.W., 1979. Pyrite: Its rapid formation in a
salt marsh and its importance in ecosystem
metabolism. Science, 203: 49-51.
Huettel, M., Ziebis, W., Forster, S., and Luther III,
G.W., 1998. Advective transport affecting metal and
nutrient distributions and interfacial fluxes in
permeable sediments. Geochimica et Cosmochimica
Acta, 62: 613-631.
Ivanov, M.V., 1968. Microbiological processes in the
formation of sulfur deposits. Israel Program for
Scientific Translations, Jerusalem.
Iversen, N., and Jørgensen, B.B., 1985. Anaerobic
methane oxidation rates at the sulfate-methane
transition in marine sediments from Kattegat and
Skagerrak (Denmark). Limnology and Oceanography, 30: 944-955.
Jackson, B.E., and McInerney, M.J., 2002. Anaerobic
microbial metabolism can proceed close to thermodynamic limits. Nature, 415: 454-456.
Jahnke, R.A., 1996. The global ocean flux of particulate
organic carbon: Areal distribution and magnitude.
Global Biogeochemical Cycles, 10: 71-88.
Jannasch, H.W., Nelson, D.C., and Wirsen, C.O., 1989.
Massive natural occurrence of unusually large
bacteria (Beggiatoa sp.) at a hydrothermal deep-sea
vent site. Nature, 342: 834-836.
Jørgensen, B.B., 1977. The sulfur cycle of a coastal
marine sediment (Limfjorden, Denmark). Limnology
and Oceanography, 22: 814-832.
Jørgensen, B.B., 1978. A comparison of methods for the
quantification of bacterial sulfate reduction in
coastal marine sediments. I. Measurements with
radiotracer techniques. Geomicrobiology Journal, 1:
11-27.
Jørgensen, B.B., 1982. Mineralization of organic matter
in the sea bed - The role of sulfate reduction.
Nature, 296: 643-645.
Jørgensen, B.B., 1983. Processes at the sediment-water
interface. In: Bolin, B. and Cook, R.C. (eds), The
major biogeochemical cycles and their interactions.
SCOPE, pp. 477-509.
Jørgensen, B.B., 1990. A thiosulfate shunt in the sulfur
cycle of marine sediments. Science, 249: 152-154.
Jørgensen, B.B., 1996. Case Study: Aarhus Bay. In:
Jørgensen, B.B., and Richardson, K. (eds), Eutrophication in a coastal marine environment. Coastal and
Estuarine Studies, American Geophysical Union,
Washington, DC, pp. 137-154
Jørgensen, B.B., and Bak, F., 1991. Pathways and
microbiology of thiosulfate transformations and
sulfate reduction in a marine sediment (Kattegat,
Denmark). Applied and Environmental Microbiology, 57: 847-856.
Jørgensen, B.B., and Gallardo, V.A., 1999. Thioploca
spp.: filamentous sulfur bacteria with nitrate
vacuoles. FEMS Microbiology Ecology, 28: 301313.
Jørgensen, B.B., and Nelson D.C., 2004. Sulfide
oxidation in marine sediments: Geochemistry meets
microbiology. In.: Amend, J.P., Edwards, K.J., and
Lyons, T.W. (eds), Sulfur Biogeochemistry - Past
and Present. Geological Society of America Special
Paper 379, Boulder, Colorado, pp. 63-81.
Jørgensen, B.B., Bang, M., and Blackburn, T.H., 1990.
Anaerobic mineralization in marine sediments from
the Baltic Sea - North Sea transition. Marine
Ecology Progress Series, 59: 39-54.
Jørgensen, B.B., Weber, A., and Zopfi, J., 2001. Sulfate
reduction and anaerobic methane oxidation in Black
Sea sediments. Deep-Sea Research, 48: 2097-2120.
Jørgensen, B.B., Böttcher, M.E., Lüschen, H., Neretin,
L., and Volkov, I., 2004. Anaerobic methane oxidation and a deep H 2 S sink generate isotopically heavy
sulfides in Black Sea sediments. Geochimica et Cosmochimica Acta, 68: 2095-2118.
Judd, A.G., Hovland, M., Dimitrov, I.I., Garcia Gil, S.,
and Jukes, V., 2002. The geological methane budget
at Continental Margins and its influence on climate
change. Geofluids, 2: 109-126.
Kallmeyer, J., Ferdelman, T.G., Weber, A., Fossing, H.,
and Jørgensen, B. B., 2004. A cold chromium
distillation procedure for radiolabeled sulfide applied
to sulfate reduction measurements. Limnology and
Oceanography Methods, 2: 171-180.
Karlin, R. and Levi, S., 1983. Diagenesis of magnetic
minerals in recent hemipelagic sediments. Nature,
303: 327-330.
Karlin, R. and Levi, S., 1985. Geochemical and
sedimentological control of the magnetic properties
of hemipelagic sediments. Journal of Geophysical
Research, 90: 10373-10392.
Kasten, S., Zabel, M., Heuer, V. and Hensen, C., 2003.
Processes and signals of nonsteady-state diagenesis
in deep-sea sediments and their pore waters. In:
Wefer, G., Mulitza, S. and Ratmeyer, V. (eds), The
South Atlantic in the Late Quaternary: Reconstruction of Material Budget and Current Systems.
Springer, Berlin, pp. 431-459.
Kasten, S., Freudenthal, T., Gingele, F.X., von Dobeneck,
T. and Schulz, H.D., 1998. Simultaneous formation of
iron-rich layers at different redox boundaries in
sediments of the Amazon Deep-Sea Fan. Geochimica
et Cosmochimica Acta 62: 2253-2264.
Kelly, D.P., 1988. Oxidation of sulfur compounds. In:
Cole, A.S. and Ferguson, S.J. (eds), The Nitrogen and
Sulfur Cycles. Soc. Gen. Microbiol., 42, pp. 65-98.
Kjær, T., 2000. Development and application of new
biosensors for microbial ecology. Ph.D. Thesis,
University of Aarhus, Denmark, 324 p.
Knittel, K., Lösekann, T., Boetius, A., Kort, R., and
Amann, R., 2005. Diversity and distribution of
methanotrophic archaea at cold seeps. Applied and
Environmental Microbiology, 71: 467-479.
Kölling, A., 1991. Frühdiagenetische Prozesse und StoffFlüsse in marinen und ästuarinen Sedimenten.
Berichte, 15, Fachbereich Geowissenschaften, Universität Bremen, 140 pp.
Krämer, M., and Cypionka, H., 1989. Sulfate formation
via ATP sulfurylase in thiosulfate- and sulfitedisproportionating bacteria. Archives of Microbiology, 122: 183-188.
References
Hoehler, T.M., Alperin, M.J., Albert, D.B., and
Martens, C.S., 1994. Field and laboratory studies
of methane oxidation in an anoxic marine sediment: Evidence for a methanogen-sulfate reducer
consortium. Global Biogeochemical Cycles, 8:
4 5 1 - 4 6 3 .
Hoehler, T.M., Alperin, M.J., Albert, D.B., and Martens,
C.S., 1998. Thermodynamic control on hydrogen
concentration in anoxic sediments. Geochimica et
Cosmochimica Acta, 62: 1745-1756.
Hoehler, T.M., Alperin, M.J., Albert, D.B., and Martens,
C.S., 2001. Apparent minimum free energy
requirements for methanogenic Archaea and sulfatereducing bacteria in an anoxic marine sediment.
FEMS Microbiology Ecology, 38: 33-41.
Howarth, R.W., 1979. Pyrite: Its rapid formation in a
salt marsh and its importance in ecosystem
metabolism. Science, 203: 49-51.
Huettel, M., Ziebis, W., Forster, S., and Luther III,
G.W., 1998. Advective transport affecting metal and
nutrient distributions and interfacial fluxes in
permeable sediments. Geochimica et Cosmochimica
Acta, 62: 613-631.
Ivanov, M.V., 1968. Microbiological processes in the
formation of sulfur deposits. Israel Program for
Scientific Translations, Jerusalem.
Iversen, N., and Jørgensen, B.B., 1985. Anaerobic
methane oxidation rates at the sulfate-methane
transition in marine sediments from Kattegat and
Skagerrak (Denmark). Limnology and Oceanography, 30: 944-955.
Jackson, B.E., and McInerney, M.J., 2002. Anaerobic
microbial metabolism can proceed close to thermodynamic limits. Nature, 415: 454-456.
Jahnke, R.A., 1996. The global ocean flux of particulate
organic carbon: Areal distribution and magnitude.
Global Biogeochemical Cycles, 10: 71-88.
Jannasch, H.W., Nelson, D.C., and Wirsen, C.O., 1989.
Massive natural occurrence of unusually large
bacteria (Beggiatoa sp.) at a hydrothermal deep-sea
vent site. Nature, 342: 834-836.
Jørgensen, B.B., 1977. The sulfur cycle of a coastal
marine sediment (Limfjorden, Denmark). Limnology
and Oceanography, 22: 814-832.
Jørgensen, B.B., 1978. A comparison of methods for the
quantification of bacterial sulfate reduction in
coastal marine sediments. I. Measurements with
radiotracer techniques. Geomicrobiology Journal, 1:
11-27.
Jørgensen, B.B., 1982. Mineralization of organic matter
in the sea bed - The role of sulfate reduction.
Nature, 296: 643-645.
Jørgensen, B.B., 1983. Processes at the sediment-water
interface. In: Bolin, B. and Cook, R.C. (eds), The
major biogeochemical cycles and their interactions.
SCOPE, pp. 477-509.
Jørgensen, B.B., 1990. A thiosulfate shunt in the sulfur
cycle of marine sediments. Science, 249: 152-154.
Jørgensen, B.B., 1996. Case Study: Aarhus Bay. In:
Jørgensen, B.B., and Richardson, K. (eds), Eutrophication in a coastal marine environment. Coastal and
Estuarine Studies, American Geophysical Union,
Washington, DC, pp. 137-154
Jørgensen, B.B., and Bak, F., 1991. Pathways and
microbiology of thiosulfate transformations and
sulfate reduction in a marine sediment (Kattegat,
Denmark). Applied and Environmental Microbiology, 57: 847-856.
Jørgensen, B.B., and Gallardo, V.A., 1999. Thioploca
spp.: filamentous sulfur bacteria with nitrate
vacuoles. FEMS Microbiology Ecology, 28: 301313.
Jørgensen, B.B., and Nelson D.C., 2004. Sulfide
oxidation in marine sediments: Geochemistry meets
microbiology. In.: Amend, J.P., Edwards, K.J., and
Lyons, T.W. (eds), Sulfur Biogeochemistry - Past
and Present. Geological Society of America Special
Paper 379, Boulder, Colorado, pp. 63-81.
Jørgensen, B.B., Bang, M., and Blackburn, T.H., 1990.
Anaerobic mineralization in marine sediments from
the Baltic Sea - North Sea transition. Marine
Ecology Progress Series, 59: 39-54.
Jørgensen, B.B., Weber, A., and Zopfi, J., 2001. Sulfate
reduction and anaerobic methane oxidation in Black
Sea sediments. Deep-Sea Research, 48: 2097-2120.
Jørgensen, B.B., Böttcher, M.E., Lüschen, H., Neretin,
L., and Volkov, I., 2004. Anaerobic methane oxidation and a deep H 2 S sink generate isotopically heavy
sulfides in Black Sea sediments. Geochimica et Cosmochimica Acta, 68: 2095-2118.
Judd, A.G., Hovland, M., Dimitrov, I.I., Garcia Gil, S.,
and Jukes, V., 2002. The geological methane budget
at Continental Margins and its influence on climate
change. Geofluids, 2: 109-126.
Kallmeyer, J., Ferdelman, T.G., Weber, A., Fossing, H.,
and Jørgensen, B. B., 2004. A cold chromium
distillation procedure for radiolabeled sulfide applied
to sulfate reduction measurements. Limnology and
Oceanography Methods, 2: 171-180.
Karlin, R. and Levi, S., 1983. Diagenesis of magnetic
minerals in recent hemipelagic sediments. Nature,
303: 327-330.
Karlin, R. and Levi, S., 1985. Geochemical and
sedimentological control of the magnetic properties
of hemipelagic sediments. Journal of Geophysical
Research, 90: 10373-10392.
Kasten, S., Zabel, M., Heuer, V. and Hensen, C., 2003.
Processes and signals of nonsteady-state diagenesis
in deep-sea sediments and their pore waters. In:
Wefer, G., Mulitza, S. and Ratmeyer, V. (eds), The
South Atlantic in the Late Quaternary: Reconstruction of Material Budget and Current Systems.
Springer, Berlin, pp. 431-459.
Kasten, S., Freudenthal, T., Gingele, F.X., von Dobeneck,
T. and Schulz, H.D., 1998. Simultaneous formation of
iron-rich layers at different redox boundaries in
sediments of the Amazon Deep-Sea Fan. Geochimica
et Cosmochimica Acta 62: 2253-2264.
Kelly, D.P., 1988. Oxidation of sulfur compounds. In:
Cole, A.S. and Ferguson, S.J. (eds), The Nitrogen and
Sulfur Cycles. Soc. Gen. Microbiol., 42, pp. 65-98.
Kjær, T., 2000. Development and application of new
biosensors for microbial ecology. Ph.D. Thesis,
University of Aarhus, Denmark, 324 p.
Knittel, K., Lösekann, T., Boetius, A., Kort, R., and
Amann, R., 2005. Diversity and distribution of
methanotrophic archaea at cold seeps. Applied and
Environmental Microbiology, 71: 467-479.
Kölling, A., 1991. Frühdiagenetische Prozesse und StoffFlüsse in marinen und ästuarinen Sedimenten.
Berichte, 15, Fachbereich Geowissenschaften, Universität Bremen, 140 pp.
Krämer, M., and Cypionka, H., 1989. Sulfate formation
via ATP sulfurylase in thiosulfate- and sulfitedisproportionating bacteria. Archives of Microbiology, 122: 183-188.
References